prot_P-wetherbeei_contig56776.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig56776.1.1
Unique Nameprot_P-wetherbeei_contig56776.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length134
Homology
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BLAST of mRNA_P-wetherbeei_contig56776.1.1 vs. uniprot
Match: A0A538BV36_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538BV36_9ACTN)

HSP 1 Score: 51.6 bits (122), Expect = 2.700e-5
Identity = 46/128 (35.94%), Postives = 62/128 (48.44%), Query Frame = 0 
Query:   12 PYPVYWVGDSFDGFRLAGVS-EPRGRVSFDYRRCVAG---RCHASLRIRTVPACRVQSADVVAPTGLGRIRGVPA--GRRGGALVLFTGRAQVRILGAPS-LARRVAAALLAAPTPAL-GGDIHSPLP 131
            PYPVYW+G SF+G R+   + +P G  +  Y  C+ G    C A LR+ T P          A +  GR+RGV A   R G  + L TG   V I  A + LA      L+   +PA+ GG +   LP
Sbjct:   44 PYPVYWLGGSFEGLRITEATHDPSGAFTVQYGDCITGGQYTCVAPLRVVTSPDNSFIPGGSTAGSS-GRLRGVRAFFARGGRVIELATGPVVVGIYAARARLAGAAGEGLVPINSPAVPGGRLPPGLP 170
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56776.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A538BV36_9ACTN2.700e-535.94Uncharacterized protein n=1 Tax=Actinomycetia bact... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56776contigP-wetherbeei_contig56776:100..501 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56776.1.1mRNA_P-wetherbeei_contig56776.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig56776 100..501 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig56776.1.1 ID=prot_P-wetherbeei_contig56776.1.1|Name=mRNA_P-wetherbeei_contig56776.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=134bp
IPDLSIAVPRRPYPVYWVGDSFDGFRLAGVSEPRGRVSFDYRRCVAGRCH
ASLRIRTVPACRVQSADVVAPTGLGRIRGVPAGRRGGALVLFTGRAQVRI
LGAPSLARRVAAALLAAPTPALGGDIHSPLPRPV
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