mRNA_P-wetherbeei_contig56772.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig56772.1.1
Unique NamemRNA_P-wetherbeei_contig56772.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig56772.1.1 vs. uniprot
Match: A0A7X9KJS6_9ACTN (Uncharacterized protein n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9KJS6_9ACTN)

HSP 1 Score: 229 bits (583), Expect = 2.520e-72
Identity = 115/174 (66.09%), Postives = 132/174 (75.86%), Query Frame = 1
Query:    1 IIIALAAVFLPKLLNSGQSLASTNEGTPTSGQA---CSTELEQVVCGAVNDVSAYWKIALPQYFGTEYRDAFTEFFTDSTSTGCGNATSQVGPFYCPADEQVYLDLGFMQQLEQQLIGTTSDLAEQYIVAHEYGHHVQNILGTNAQVQKAQQNDPGNANKYSIALELQADCFAG 513
            II+ LAAVFLPKLL +G + A++      S  A   C TELEQ+VCG  NDV  YW  ALPQ+F T Y    T +FT   STGCG A+S+ GPFYCPAD  VY+DL FMQQLEQ LIG  +DLAEQYI+AHEYGHHVQN+LGTNAQVQ+A QNDPG AN+YS+ALELQADCFAG
Sbjct:   61 IIVLLAAVFLPKLLGAGGTGATSQAAEVGSSGAPGQCVTELEQIVCGVTNDVQLYWSDALPQFFDTPYEITETVWFTGGVSTGCGQASSETGPFYCPADHLVYIDLEFMQQLEQMLIGQPTDLAEQYILAHEYGHHVQNLLGTNAQVQQASQNDPGRANQYSVALELQADCFAG 234          
BLAST of mRNA_P-wetherbeei_contig56772.1.1 vs. uniprot
Match: A0A4R7I3G1_9ACTN (Uncharacterized protein n=1 Tax=Ilumatobacter fluminis TaxID=467091 RepID=A0A4R7I3G1_9ACTN)

HSP 1 Score: 203 bits (516), Expect = 3.590e-62
Identity = 105/181 (58.01%), Postives = 127/181 (70.17%), Query Frame = 1
Query:    1 IIIALAAVF-LPKLLNSGQSLASTNEGTPT---------SGQACSTELEQVVCGAVNDVSAYWKIALPQYFGTEYRDAFTEFFTDSTSTGCGNATSQVGPFYCPADEQVYLDLGFMQQLEQQLIGTTSDLAEQYIVAHEYGHHVQNILGTNAQVQKAQQNDPGNANKYSIALELQADCFAG 513
            +++ + AVF LP+L+    +  S   GTPT         S  ACSTELEQ++CGA NDVS YW   LP  FG +Y D  T FF+ ST TGCG A+SQ GPFYCPAD  VY DL F+ QL++Q    T DLA QYIVAHE+GHHVQN+LG NAQV +AQ++DP  AN+YS+ALELQADCFAG
Sbjct:   54 VVLVMVAVFVLPQLMGGDLTGGSQVAGTPTGDAADSSTSSADACSTELEQILCGATNDVSEYWIDQLPLSFGVDYVDTQTVFFSGSTRTGCGQASSQTGPFYCPADNLVYFDLDFLVQLQEQF-DATGDLAAQYIVAHEFGHHVQNVLGINAQVTEAQRSDPSRANQYSVALELQADCFAG 233          
BLAST of mRNA_P-wetherbeei_contig56772.1.1 vs. uniprot
Match: A0A2E0RXA8_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0RXA8_9ACTN)

HSP 1 Score: 200 bits (508), Expect = 5.950e-61
Identity = 103/180 (57.22%), Postives = 127/180 (70.56%), Query Frame = 1
Query:    4 IIALAAVF-LPKLLNSGQSLASTNEGTPTSG---------QACSTELEQVVCGAVNDVSAYWKIALPQYFGTEYRDAFTEFFTDSTSTGCGNATSQVGPFYCPADEQVYLDLGFMQQLEQQLIGTTSDLAEQYIVAHEYGHHVQNILGTNAQVQKAQQNDPGNANKYSIALELQADCFAG 513
            ++ +AAVF LP+LL  G S  +   G+P+            ACSTELEQ++CGA NDVS YW   LP  FG EY D  T FF+  T+TGCG A+SQ GPFYCP D+ VY DL F+ QL+ +    + DLA QYIVAHE+GHHVQN+LG NAQV++AQQ+DP  AN+YS+ALELQADCFAG
Sbjct:   56 VLVMAAVFVLPQLLGGGLSGGTQIAGSPSGAAADSSTANDDACSTELEQILCGATNDVSEYWIEQLPLSFGVEYVDTQTVFFSGRTTTGCGEASSQTGPFYCPLDQLVYFDLDFLVQLQDRF-DASGDLAAQYIVAHEFGHHVQNVLGINAQVREAQQSDPARANQYSVALELQADCFAG 234          
BLAST of mRNA_P-wetherbeei_contig56772.1.1 vs. uniprot
Match: A0A7V9DP23_9ACTN (Neutral zinc metallopeptidase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9DP23_9ACTN)

HSP 1 Score: 194 bits (493), Expect = 5.980e-59
Identity = 98/175 (56.00%), Postives = 121/175 (69.14%), Query Frame = 1
Query:    1 IIIALAAVFLPKLLNSGQSLASTNEGTPTSGQA----CSTELEQVVCGAVNDVSAYWKIALPQYFGTEYRDAFTEFFTDSTSTGCGNATSQVGPFYCPADEQVYLDLGFMQQLEQQLIGTTSDLAEQYIVAHEYGHHVQNILGTNAQVQKAQQNDPGNANKYSIALELQADCFAG 513
            II+ LA++FLPKLL  G + A +     T+G+A    C TE EQ++CG  +DV  +W  A P  F  EY    T FF+  T+TGCG A+S+ GPFYCP DE VY DL F+ QL+ Q      DLA QYIVAHEYGHH+QNILG NA++Q+AQQ DP NAN+YS+ALELQADC AG
Sbjct:   41 IIVVLASIFLPKLLGGGGAPALSPGDGDTAGRANPDACQTEAEQILCGGTDDVQDFWTEAFPTQFQQEYEPTQTVFFSGFTNTGCGQASSETGPFYCPNDELVYFDLDFLAQLQDQF-DAEGDLAAQYIVAHEYGHHIQNILGINAEMQQAQQQDPDNANQYSVALELQADCLAG 214          
BLAST of mRNA_P-wetherbeei_contig56772.1.1 vs. uniprot
Match: A0A848UBM7_9ACTN (Uncharacterized protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A848UBM7_9ACTN)

HSP 1 Score: 191 bits (484), Expect = 1.440e-58
Identity = 91/138 (65.94%), Postives = 108/138 (78.26%), Query Frame = 1
Query:  100 CSTELEQVVCGAVNDVSAYWKIALPQYFGTEYRDAFTEFFTDSTSTGCGNATSQVGPFYCPADEQVYLDLGFMQQLEQQLIGTTSDLAEQYIVAHEYGHHVQNILGTNAQVQKAQQNDPGNANKYSIALELQADCFAG 513
            CSTELEQ++CGA +DVS YW   LP  FG +Y D  T FF+ ST+TGCG A+SQ GPFYCPAD  +Y DL F+Q L+ Q  G T DLA QYIVAHEYGHHVQN+L  NAQV++AQ++DP  AN+YS+ALELQADCFAG
Sbjct:    2 CSTELEQILCGATDDVSEYWIDQLPISFGRDYADTQTVFFSGSTNTGCGMASSQTGPFYCPADSLIYFDLDFLQTLQNQF-GATGDLAAQYIVAHEYGHHVQNVLEINAQVRQAQRDDPQRANQYSVALELQADCFAG 138          
BLAST of mRNA_P-wetherbeei_contig56772.1.1 vs. uniprot
Match: A0A812ZXX9_9DINO (YpfJ protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812ZXX9_9DINO)

HSP 1 Score: 203 bits (516), Expect = 5.730e-58
Identity = 105/181 (58.01%), Postives = 127/181 (70.17%), Query Frame = 1
Query:    1 IIIALAAVF-LPKLLNSGQSLASTNEGTPT---------SGQACSTELEQVVCGAVNDVSAYWKIALPQYFGTEYRDAFTEFFTDSTSTGCGNATSQVGPFYCPADEQVYLDLGFMQQLEQQLIGTTSDLAEQYIVAHEYGHHVQNILGTNAQVQKAQQNDPGNANKYSIALELQADCFAG 513
            +++ + AVF LP+L+    +  S   GTPT         S  ACSTELEQ++CGA NDVS YW   LP  FG +Y D  T FF+ ST TGCG A+SQ GPFYCPAD  VY DL F+ QL++Q    T DLA QYIVAHE+GHHVQN+LG NAQV +AQ++DP  AN+YS+ALELQADCFAG
Sbjct:  395 VVLVMVAVFVLPQLMGGDLTGGSQVAGTPTGDAADSSTASADACSTELEQILCGATNDVSEYWIDQLPLSFGVDYVDTQTVFFSGSTRTGCGQASSQTGPFYCPADNLVYFDLDFLVQLQEQF-DATGDLAAQYIVAHEFGHHVQNVLGINAQVTEAQRSDPSRANQYSVALELQADCFAG 574          
BLAST of mRNA_P-wetherbeei_contig56772.1.1 vs. uniprot
Match: A0A539E8R8_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539E8R8_9ACTN)

HSP 1 Score: 187 bits (476), Expect = 1.140e-57
Identity = 88/115 (76.52%), Postives = 99/115 (86.09%), Query Frame = 1
Query:  169 LPQYFGTEYRDAFTEFFTDSTSTGCGNATSQVGPFYCPADEQVYLDLGFMQQLEQQLIGTTSDLAEQYIVAHEYGHHVQNILGTNAQVQKAQQNDPGNANKYSIALELQADCFAG 513
            LP +FGT+Y+   T FFT S STGCGNATSQ GPFYCP D  VY+DL FMQQLEQQL+G+ +DLAEQYIVAHEYGHHVQN+LGTNAQVQ+AQQNDP  AN+YS ALELQADC+AG
Sbjct:    1 LPTFFGTQYQVTKTVFFTGSVSTGCGNATSQTGPFYCPLDNLVYIDLEFMQQLEQQLVGSATDLAEQYIVAHEYGHHVQNVLGTNAQVQQAQQNDPSRANQYSQALELQADCYAG 115          
BLAST of mRNA_P-wetherbeei_contig56772.1.1 vs. uniprot
Match: A0A7W1LT17_9ACTN (Neutral zinc metallopeptidase n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1LT17_9ACTN)

HSP 1 Score: 189 bits (479), Expect = 8.440e-57
Identity = 102/178 (57.30%), Postives = 125/178 (70.22%), Query Frame = 1
Query:    1 IIIALAAVFLPKLLN-----SGQSLASTNEGTPTSGQACSTELEQVVCGAVNDVSAYW-KIALPQYFGT-EYRDAFTEFFTDSTSTGCGNATSQVGPFYCPADEQVYLDLGFMQQLEQQLIGTTSDLAEQYIVAHEYGHHVQNILGTNAQVQKAQQNDPGNANKYSIALELQADCFAG 513
            I++ LAAVFLPKLL      SG   A T++  P     C +E+EQV+CGA +DV+ +W +   PQ+ G  EY D  T FF+  T+TGCG A+++ GPFYCP D  VY DL F+Q L+ QL G   DL  QYIVAHEYGHHVQN+LGTNAQVQ+AQQ DP  AN+YS+ALELQADC AG
Sbjct:   43 ILLMLAAVFLPKLLGGGGAPSGVGPAETSDTNPAG--TCDSEIEQVLCGATDDVAEFWIRDFEPQFGGDREYLDTETVFFSGFTNTGCGQASAETGPFYCPNDNLVYFDLDFLQTLQNQL-GIEGDLGVQYIVAHEYGHHVQNVLGTNAQVQQAQQRDPERANQYSVALELQADCLAG 217          
BLAST of mRNA_P-wetherbeei_contig56772.1.1 vs. uniprot
Match: A0A7Y1ZVQ6_9ACTN (Uncharacterized protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZVQ6_9ACTN)

HSP 1 Score: 184 bits (467), Expect = 1.540e-54
Identity = 95/180 (52.78%), Postives = 117/180 (65.00%), Query Frame = 1
Query:    1 IIIALAAVFLPKLLNSGQSLAST---------NEGTPTSGQACSTELEQVVCGAVNDVSAYWKIALPQYFGTEYRDAFTEFFTDSTSTGCGNATSQVGPFYCPADEQVYLDLGFMQQLEQQLIGTTSDLAEQYIVAHEYGHHVQNILGTNAQVQKAQQNDPGNANKYSIALELQADCFAG 513
            II+ LA +FLPKLL      AS          ++ T    + CS+E EQ++CGA  DV  +W    P+ F  EY    T FF+  T+TGCG A++Q GPFYCPAD  VY DL F+ QL+QQ      DLA QYIVAHEYGHH+QN+LG NAQ+++ QQ DP NAN YS+ALELQADC AG
Sbjct:   74 IIVLLATLFLPKLLGGATGGASXXXXXXXXXXSQTTGGDDETCSSEAEQILCGATIDVQEFWLEEFPRSFNQEYDVTSTVFFSGFTNTGCGQASAQTGPFYCPADRLVYFDLDFLAQLQQQF-SAPGDLAAQYIVAHEYGHHIQNVLGINAQMRQLQQRDPRNANAYSVALELQADCLAG 252          
BLAST of mRNA_P-wetherbeei_contig56772.1.1 vs. uniprot
Match: A0A6C7EG36_ILUCY (Uncharacterized protein n=2 Tax=Ilumatobacter coccineus TaxID=467094 RepID=A0A6C7EG36_ILUCY)

HSP 1 Score: 177 bits (450), Expect = 4.580e-52
Identity = 93/180 (51.67%), Postives = 115/180 (63.89%), Query Frame = 1
Query:    1 IIIALAAVFLPKLLNS--------GQSLASTNEGTPTSGQACSTELEQVVCGAVNDVSAYWKIALPQYF-GTEYRDAFTEFFTDSTSTGCGNATSQVGPFYCPADEQVYLDLGFMQQLEQQLIGTTSDLAEQYIVAHEYGHHVQNILGTNAQVQKAQQNDPGNANKYSIALELQADCFAG 513
            I++ LA +FLPKLL          G + A +++ T      CS+E EQ++CGA  DV  YW    P+ F G EY    T FF+  T+TGCG A+SQ GPFYCPAD  VY DL F+ +L+    G   DLA QYIVAHEYGHH+QN LG NA++ + QQ DP N N YS+ALELQADC AG
Sbjct:   67 IVVLLATLFLPKLLGGASGTAAGLGGTSAPSSQSTGGDDDTCSSEAEQILCGATIDVQEYWIEQYPESFQGLEYPVTQTVFFSGFTNTGCGQASSQTGPFYCPADNLVYFDLDFLAKLQADF-GAEGDLAAQYIVAHEYGHHIQNALGINAEMHRKQQQDPRNKNAYSVALELQADCLAG 245          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56772.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X9KJS6_9ACTN2.520e-7266.09Uncharacterized protein n=2 Tax=Actinobacteria Tax... [more]
A0A4R7I3G1_9ACTN3.590e-6258.01Uncharacterized protein n=1 Tax=Ilumatobacter flum... [more]
A0A2E0RXA8_9ACTN5.950e-6157.22Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A7V9DP23_9ACTN5.980e-5956.00Neutral zinc metallopeptidase n=1 Tax=Acidimicrobi... [more]
A0A848UBM7_9ACTN1.440e-5865.94Uncharacterized protein n=1 Tax=Ilumatobacter sp. ... [more]
A0A812ZXX9_9DINO5.730e-5858.01YpfJ protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A539E8R8_9ACTN1.140e-5776.52Uncharacterized protein (Fragment) n=1 Tax=Acidimi... [more]
A0A7W1LT17_9ACTN8.440e-5757.30Neutral zinc metallopeptidase n=2 Tax=Acidimicrobi... [more]
A0A7Y1ZVQ6_9ACTN1.540e-5452.78Uncharacterized protein n=1 Tax=Ilumatobacter sp. ... [more]
A0A6C7EG36_ILUCY4.580e-5251.67Uncharacterized protein n=2 Tax=Ilumatobacter cocc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56772contigP-wetherbeei_contig56772:2..514 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1313172.YM304_36410
Preferred nameypfJ
PFAMsZn_peptidase
Model size513
Max annot lvl201174|Actinobacteria
KEGG koko:K07054
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0005576
Exons1
Evalue7.51e-53
EggNOG OGsCOG2321@1|root,COG2321@2|Bacteria,2H3UT@201174|Actinobacteria
DescriptionNeutral zinc metallopeptidase
Cds size513
COG categoryS
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186843.0107281-CDS-P-wetherbeei_contig56772:1..5141683186843.0107281-CDS-P-wetherbeei_contig56772:1..514Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig56772 2..514 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56772.1.1prot_P-wetherbeei_contig56772.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig56772 2..514 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig56772.1.1

>prot_P-wetherbeei_contig56772.1.1 ID=prot_P-wetherbeei_contig56772.1.1|Name=mRNA_P-wetherbeei_contig56772.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=171bp
IIIALAAVFLPKLLNSGQSLASTNEGTPTSGQACSTELEQVVCGAVNDVS
AYWKIALPQYFGTEYRDAFTEFFTDSTSTGCGNATSQVGPFYCPADEQVY
LDLGFMQQLEQQLIGTTSDLAEQYIVAHEYGHHVQNILGTNAQVQKAQQN
DPGNANKYSIALELQADCFAG
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mRNA from alignment at P-wetherbeei_contig56772:2..514+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig56772.1.1 ID=mRNA_P-wetherbeei_contig56772.1.1|Name=mRNA_P-wetherbeei_contig56772.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig56772:2..514+ (Phaeothamnion wetherbeei SAG_119_79)
ATCATCATCGCCCTGGCGGCCGTGTTCCTGCCCAAGCTCCTCAACTCGGG TCAGTCGTTGGCATCCACGAACGAGGGCACGCCCACGTCGGGCCAGGCGT GCTCGACCGAGCTGGAACAGGTCGTCTGCGGTGCGGTCAACGACGTCTCG GCGTACTGGAAGATCGCCCTGCCGCAGTACTTCGGCACGGAGTACCGCGA CGCGTTCACCGAGTTCTTCACCGACAGCACCAGCACGGGGTGCGGCAACG CCACCTCACAGGTCGGGCCGTTCTACTGCCCCGCCGACGAGCAGGTGTAC CTCGACCTCGGCTTCATGCAGCAGCTCGAGCAGCAGCTGATCGGCACCAC CAGCGACCTCGCCGAGCAGTACATCGTCGCCCACGAGTACGGCCACCACG TGCAGAACATCCTGGGCACCAACGCGCAGGTGCAGAAGGCTCAGCAGAAC GATCCTGGCAACGCCAACAAGTACTCGATCGCTCTCGAGCTGCAAGCCGA TTGCTTCGCCGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig56772:2..514+

>mRNA_P-wetherbeei_contig56772.1.1 ID=mRNA_P-wetherbeei_contig56772.1.1|Name=mRNA_P-wetherbeei_contig56772.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig56772:2..514+ (Phaeothamnion wetherbeei SAG_119_79)
ATCATCATCGCCCTGGCGGCCGTGTTCCTGCCCAAGCTCCTCAACTCGGG
TCAGTCGTTGGCATCCACGAACGAGGGCACGCCCACGTCGGGCCAGGCGT
GCTCGACCGAGCTGGAACAGGTCGTCTGCGGTGCGGTCAACGACGTCTCG
GCGTACTGGAAGATCGCCCTGCCGCAGTACTTCGGCACGGAGTACCGCGA
CGCGTTCACCGAGTTCTTCACCGACAGCACCAGCACGGGGTGCGGCAACG
CCACCTCACAGGTCGGGCCGTTCTACTGCCCCGCCGACGAGCAGGTGTAC
CTCGACCTCGGCTTCATGCAGCAGCTCGAGCAGCAGCTGATCGGCACCAC
CAGCGACCTCGCCGAGCAGTACATCGTCGCCCACGAGTACGGCCACCACG
TGCAGAACATCCTGGGCACCAACGCGCAGGTGCAGAAGGCTCAGCAGAAC
GATCCTGGCAACGCCAACAAGTACTCGATCGCTCTCGAGCTGCAAGCCGA
TTGCTTCGCCGGC
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