mRNA_P-wetherbeei_contig56713.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig56713.1.1
Unique NamemRNA_P-wetherbeei_contig56713.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig56713.1.1 vs. uniprot
Match: A0A537V672_9PROT (EamA family transporter n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537V672_9PROT)

HSP 1 Score: 214 bits (546), Expect = 3.650e-67
Identity = 122/167 (73.05%), Postives = 133/167 (79.64%), Query Frame = 1
Query:    1 LLGWGGIVALVAGVFLLSARGGRDLVRVDRRAVGFALLTALTICAYSVVDGIGGRLAGNPHAYSAWLFVGIALVMLPYALWRDGRDVIPAMRIYWRRGLAGGGLQLMSYGIAIWAMAVAPIAIVAALRETSVLFGAAIAVVVLKEPVR---IAAALMIVGGLVLIRM 492
            LLGW GI+ LVAGV LLS RGGRDL R+D++AVGFAL TA+TICAYSVVDG+G R AGNP++YSA LFVG   VML YAL R G DVI AM   W  GLAGG LQL SYGIAIWAM VAPIAIVAALRETSVLFGA IAV  LKEP+R   + AALMIV GL LIR+
Sbjct:  114 LLGWSGILLLVAGVMLLSLRGGRDLARLDKKAVGFALFTAVTICAYSVVDGVGARHAGNPNSYSAALFVGTGPVMLAYALARRGGDVIAAMGRQWSLGLAGGTLQLGSYGIAIWAMTVAPIAIVAALRETSVLFGAVIAVTFLKEPLRAGRVVAALMIVAGLTLIRL 280          
BLAST of mRNA_P-wetherbeei_contig56713.1.1 vs. uniprot
Match: A0A537PKZ7_9PROT (EamA family transporter n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537PKZ7_9PROT)

HSP 1 Score: 201 bits (512), Expect = 5.100e-62
Identity = 114/167 (68.26%), Postives = 131/167 (78.44%), Query Frame = 1
Query:    1 LLGWGGIVALVAGVFLLSARGGRDLVRVDRRAVGFALLTALTICAYSVVDGIGGRLAGNPHAYSAWLFVGIALVMLPYALWRDGRDVIPAMRIYWRRGLAGGGLQLMSYGIAIWAMAVAPIAIVAALRETSVLFGAAIAVVVLKEPVR---IAAALMIVGGLVLIRM 492
            L GW GI+ LV GV LLS RGGRD+ R+D +A+GFAL TA+TICAYSVVDG+G R AG+ +AYSA LFVGI  VM  YAL R GR V+ A+  +WR GLAGG LQL SY +AIWAM VAPIAIVAALRETSVLFGA IA++ LKEP R   IAAALMI+ GL LIR+
Sbjct:  114 LAGWSGIILLVGGVMLLSLRGGRDVTRLDSKAIGFALFTAVTICAYSVVDGMGARRAGSANAYSAALFVGIGPVMAVYALGRRGRGVMAAIEGHWRLGLAGGTLQLGSYAVAIWAMTVAPIAIVAALRETSVLFGALIAILFLKEPPRAGRIAAALMIMVGLTLIRL 280          
BLAST of mRNA_P-wetherbeei_contig56713.1.1 vs. uniprot
Match: A0A537TD70_9PROT (EamA family transporter n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537TD70_9PROT)

HSP 1 Score: 201 bits (511), Expect = 7.220e-62
Identity = 112/167 (67.07%), Postives = 129/167 (77.25%), Query Frame = 1
Query:    1 LLGWGGIVALVAGVFLLSARGGRDLVRVDRRAVGFALLTALTICAYSVVDGIGGRLAGNPHAYSAWLFVGIALVMLPYALWRDGRDVIPAMRIYWRRGLAGGGLQLMSYGIAIWAMAVAPIAIVAALRETSVLFGAAIAVVVLKEPV---RIAAALMIVGGLVLIRM 492
            L GWGGI+ LV GV LLS RGGRD+  +DR+AVGFAL TA+TICAYSVVDG+G R AG+ +AYS  LF     VM  YAL R GR+VI  M  +WR G+AGG LQL +YGI IWAM VAPIAIVAALRETSVLFGA IA V+LKEP+   R+AAALMIV GL L+R+
Sbjct:  114 LAGWGGIILLVCGVILLSLRGGRDIAPLDRKAVGFALFTAVTICAYSVVDGVGARRAGSANAYSVALFAATGPVMAMYALARRGREVIAGMVRHWRIGIAGGTLQLGAYGIVIWAMTVAPIAIVAALRETSVLFGALIATVILKEPLQAPRVAAALMIVAGLTLMRL 280          
BLAST of mRNA_P-wetherbeei_contig56713.1.1 vs. uniprot
Match: A0A363THC9_9BRAD (EamA family transporter n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363THC9_9BRAD)

HSP 1 Score: 197 bits (501), Expect = 2.280e-60
Identity = 111/168 (66.07%), Postives = 132/168 (78.57%), Query Frame = 1
Query:    1 LLGWGGIVALVAGVFLLSARGGRDLVRVDRRAVGFALLTALTICAYSVVDGIGGRLAGNPHAYSAWLFVGIALVMLPYALWRDGRDVIPAMRIYWRRGLAGGGLQLMSYGIAIWAMAVAPIAIVAALRETSVLFGAAIAVVVLKEPVR---IAAALMIVGGLVLIRMQ 495
            L+GW GI+ LVAGVFLLS RGGR +V +DRRA+GFAL TA+TICAYS+VDG+G R AGN HAY+AWLF+   L +  +A+ R G  V+  M  +WR GL GG L ++SY IAIWAM VAPIAIVAALRETSVLFGAAIAVV+LKEP+R   I AA+MIV GL LIR+ 
Sbjct:  114 LVGWLGILVLVAGVFLLSLRGGRGVV-LDRRAIGFALFTAVTICAYSLVDGLGARTAGNAHAYTAWLFLLDGLFLTAFAVLRRGPGVLVDMARFWRSGLVGGTLSMISYWIAIWAMTVAPIAIVAALRETSVLFGAAIAVVILKEPLRTARIVAAVMIVCGLALIRLH 280          
BLAST of mRNA_P-wetherbeei_contig56713.1.1 vs. uniprot
Match: A0A1W6ZUB6_9HYPH (EamA domain-containing protein n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZUB6_9HYPH)

HSP 1 Score: 179 bits (454), Expect = 2.850e-53
Identity = 109/166 (65.66%), Postives = 119/166 (71.69%), Query Frame = 1
Query:    7 GWGGIVALVAGVFLLSARGGRDLVRVDRRAVGFALLTALTICAYSVVDGIGGRLAGNPHAYSAWLFVGIALVMLPYALWRDGRDVIPAMRIYWRRGLAGGGLQLMSYGIAIWAMAVAPIAIVAALRETSVLFGAAIAVVVLKEPVR---IAAALMIVGGLVLIRMQ 495
            GW GIV L  GV LLS RGG  L  VDRRAVGFAL TALTIC YS+VDGIGGR A +PH Y+   F G  +VM  Y L R G   I  M   W  GL GG LQL+SYGIAIWAM +APIA+VAALRETSVLFGAAIA+V LKEP+R   I AA MIV GLVLIR+ 
Sbjct:  116 GWLGIVTLALGVLLLSLRGGSGLT-VDRRAVGFALFTALTICLYSIVDGIGGRTAIDPHPYTLAWFAGNGVVMAVYFLIRRGTMPIVPMLRNWPVGLFGGSLQLLSYGIAIWAMTLAPIALVAALRETSVLFGAAIAIVFLKEPLRPARILAAFMIVCGLVLIRVS 280          
BLAST of mRNA_P-wetherbeei_contig56713.1.1 vs. uniprot
Match: A0A537L3V7_9PROT (EamA family transporter n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537L3V7_9PROT)

HSP 1 Score: 179 bits (453), Expect = 4.150e-53
Identity = 96/167 (57.49%), Postives = 119/167 (71.26%), Query Frame = 1
Query:    4 LGWGGIVALVAGVFLLSARGGRDLVRVDRRAVGFALLTALTICAYSVVDGIGGRLAGNPHAYSAWLFVGIALVMLPYALWRDGRDVIPAMRIYWRRGLAGGGLQLMSYGIAIWAMAVAPIAIVAALRETSVLFGAAIAVVVLKEPVR---IAAALMIVGGLVLIRMQ 495
            +GWGGI AL +G+FLLS RGG +   ++RRAVG+AL TA+TIC YS+VDG G R AGN H+Y+ WLFV     +   AL R G  V+P +  +W+ GL GG L L +Y I IWAM V PIAIVAALRETSVLF A IAV +LKEP+R   + AA++IV GL  IR+Q
Sbjct:  115 VGWGGIFALTSGIFLLSLRGGGEFAHLNRRAVGYALFTAVTICCYSLVDGQGARTAGNAHSYALWLFVIDGAFITGVALLRHGTGVVPGVLRFWKSGLIGGTLSLAAYWIVIWAMTVQPIAIVAALRETSVLFAALIAVAILKEPLRASRVVAAVLIVAGLAAIRLQ 281          
BLAST of mRNA_P-wetherbeei_contig56713.1.1 vs. uniprot
Match: A0A849L648_9RHOB (EamA family transporter n=1 Tax=Halovulum dunhuangense TaxID=1505036 RepID=A0A849L648_9RHOB)

HSP 1 Score: 160 bits (406), Expect = 4.950e-46
Identity = 91/164 (55.49%), Postives = 119/164 (72.56%), Query Frame = 1
Query:   16 GIVALVAGVFLLSARGGRDLVRVDRRAVGFALLTALTICAYSVVDGIGGRLAGNPHAYSAWLFV--GIALVMLPYALWRDGRDVIPAMRIYWRRGLAGGGLQLMSYGIAIWAMAVAPIAIVAALRETSVLFGAAIAVVVLKEPV---RIAAALMIVGGLVLIRM 492
            GI  LV GV+L+S RGGRDL R+DR A+GFALLT+  I  Y++ DG G R+AG+ H Y+ WLF   G+A+V+L  AL   GR     +R +W+ GL GG + L +Y IAIWAM  APIA+VAALRE+SVLF AAI+VV+L+EP+   R AAAL IV G+V++R+
Sbjct:  119 GIALLVGGVWLMSLRGGRDLARMDRSALGFALLTSAFIAGYTLTDGQGARVAGSAHGYTMWLFALDGLAMVLLLLAL--RGRHAFAVLRPHWKTGLGGGAMSLGAYWIAIWAMTEAPIALVAALRESSVLFAAAISVVILREPLTRWRAAAALSIVAGVVMMRL 280          
BLAST of mRNA_P-wetherbeei_contig56713.1.1 vs. uniprot
Match: A0A537RSE8_9PROT (EamA family transporter n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537RSE8_9PROT)

HSP 1 Score: 160 bits (406), Expect = 4.950e-46
Identity = 86/166 (51.81%), Postives = 114/166 (68.67%), Query Frame = 1
Query:    7 GWGGIVALVAGVFLLSARGGRDLVRVDRRAVGFALLTALTICAYSVVDGIGGRLAGNPHAYSAWLFVGIALVMLPYALWRDGRDVIPAMRIYWRRGLAGGGLQLMSYGIAIWAMAVAPIAIVAALRETSVLFGAAIAVVVLKEPV---RIAAALMIVGGLVLIRMQ 495
            GW G++ L AG+ LL+ RGGR L R D R+VGFALLT+LTI  Y++VDG+G R++G+P  Y+ WLFV     M  Y   R GR ++      W   +AG  L   +YGIAIWAM VAPIA+VAALRETSVLF A ++ V+L+EPV   R  AA +++ GLVL+R++
Sbjct:  116 GWAGVIVLAAGILLLAFRGGRALERFDARSVGFALLTSLTITTYTLVDGVGARVSGSPLQYTVWLFVLSGAAMAIYGFARIGRRLVGDFAANWPLAIAGAALSTAAYGIAIWAMTVAPIALVAALRETSVLFAALLSTVLLREPVLPARFFAACLVLAGLVLVRLR 281          
BLAST of mRNA_P-wetherbeei_contig56713.1.1 vs. uniprot
Match: A0A0S3PZZ8_9BRAD (EamA-like transporter family protein n=1 Tax=Variibacter gotjawalensis TaxID=1333996 RepID=A0A0S3PZZ8_9BRAD)

HSP 1 Score: 155 bits (393), Expect = 1.140e-45
Identity = 87/152 (57.24%), Postives = 109/152 (71.71%), Query Frame = 1
Query:   46 LLSARGGRDLVRVDRRAVGFALLTALTICAYSVVDGIGGRLAGNPHAYSAWLFVGIALVMLPYALWRDGRDVIPAMRIYWRRGLAGGGLQLMSYGIAIWAMAVAPIAIVAALRETSVLFGAAIAVVVLKEPVR---IAAALMIVGGLVLIRM 492
            LLS RGGR + +++RRAVGFALLT+ TI  YS+VDG+G R++ NPHAY+  LFV   + +L +A WR G  ++  +   W+  L GG L L +Y IAIWAM VAPIAIVAALRETSVLF A IAV  L EP+R   +AAA +IV GL LIR+
Sbjct:    2 LLSLRGGRSVGQIERRAVGFALLTSATISGYSIVDGVGARVSANPHAYTIALFVFDEIAILLFAWWRRGASIVHGVSATWKVALFGGALSLAAYWIAIWAMTVAPIAIVAALRETSVLFAAGIAVFFLGEPLRRSRVAAAAIIVTGLALIRL 153          
BLAST of mRNA_P-wetherbeei_contig56713.1.1 vs. uniprot
Match: A0A7C4XYY8_9HYPH (EamA family transporter n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XYY8_9HYPH)

HSP 1 Score: 159 bits (402), Expect = 1.980e-45
Identity = 87/167 (52.10%), Postives = 116/167 (69.46%), Query Frame = 1
Query:    4 LGWGGIVALVAGVFLLSARGGRDLVRVDRRAVGFALLTALTICAYSVVDGIGGRLAGNPHAYSAWLFVGIALVMLPYALWRDGRDVIPAMRIYWRRGLAGGGLQLMSYGIAIWAMAVAPIAIVAALRETSVLFGAAIAVVVLKEPV---RIAAALMIVGGLVLIRMQ 495
            +GW GI+ L  G+ LLS RGGRD+ ++DRRA+GFAL+TA +I  Y++ DGIG RLAG P +Y  W+FV   L+ML + L R  + ++      W   LAGG L   +Y IAIWAM  APIA+VAALRETSVLF A I +  L+EPV   R+ AAL++V G+VL+R++
Sbjct:  115 IGWCGILVLAGGIMLLSFRGGRDVRKIDRRAIGFALVTAASIALYTLADGIGARLAGAPSSYIVWMFVLDGLMMLTFGLLRFPKAMVSDGVNSWALVLAGGALSCAAYAIAIWAMTKAPIALVAALRETSVLFAAMIGIAWLREPVIATRLVAALLVVAGMVLVRLR 281          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56713.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A537V672_9PROT3.650e-6773.05EamA family transporter n=1 Tax=Alphaproteobacteri... [more]
A0A537PKZ7_9PROT5.100e-6268.26EamA family transporter n=2 Tax=Alphaproteobacteri... [more]
A0A537TD70_9PROT7.220e-6267.07EamA family transporter n=1 Tax=Alphaproteobacteri... [more]
A0A363THC9_9BRAD2.280e-6066.07EamA family transporter n=1 Tax=Bradyrhizobiaceae ... [more]
A0A1W6ZUB6_9HYPH2.850e-5365.66EamA domain-containing protein n=1 Tax=Pseudorhodo... [more]
A0A537L3V7_9PROT4.150e-5357.49EamA family transporter n=1 Tax=Alphaproteobacteri... [more]
A0A849L648_9RHOB4.950e-4655.49EamA family transporter n=1 Tax=Halovulum dunhuang... [more]
A0A537RSE8_9PROT4.950e-4651.81EamA family transporter n=1 Tax=Alphaproteobacteri... [more]
A0A0S3PZZ8_9BRAD1.140e-4557.24EamA-like transporter family protein n=1 Tax=Varii... [more]
A0A7C4XYY8_9HYPH1.980e-4552.10EamA family transporter n=1 Tax=Hyphomicrobiales b... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56713contigP-wetherbeei_contig56713:1..498 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1120983.KB894571_gene2641
PFAMsEamA
Model size498
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue6.51e-43
EggNOG OGsCOG0697@1|root,COG0697@2|Bacteria,1R46X@1224|Proteobacteria,2TSE9@28211|Alphaproteobacteria,1JNZH@119043|Rhodobiaceae
DescriptionEamA-like transporter family
Cds size498
COG categoryEG
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186842.5532796-CDS-P-wetherbeei_contig56713:0..4981683186842.5532796-CDS-P-wetherbeei_contig56713:0..498Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig56713 1..498 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56713.1.1prot_P-wetherbeei_contig56713.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig56713 1..498 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig56713.1.1

>prot_P-wetherbeei_contig56713.1.1 ID=prot_P-wetherbeei_contig56713.1.1|Name=mRNA_P-wetherbeei_contig56713.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp
LLGWGGIVALVAGVFLLSARGGRDLVRVDRRAVGFALLTALTICAYSVVD
GIGGRLAGNPHAYSAWLFVGIALVMLPYALWRDGRDVIPAMRIYWRRGLA
GGGLQLMSYGIAIWAMAVAPIAIVAALRETSVLFGAAIAVVVLKEPVRIA
AALMIVGGLVLIRMQ*
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mRNA from alignment at P-wetherbeei_contig56713:1..498+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig56713.1.1 ID=mRNA_P-wetherbeei_contig56713.1.1|Name=mRNA_P-wetherbeei_contig56713.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig56713:1..498+ (Phaeothamnion wetherbeei SAG_119_79)
CTGCTCGGCTGGGGCGGCATCGTCGCGCTGGTCGCCGGCGTCTTCCTGCT GTCGGCGCGCGGCGGCCGCGATCTGGTGCGCGTCGACCGCCGCGCCGTCG GCTTCGCGCTGCTCACCGCGCTGACCATCTGCGCCTATTCGGTGGTCGAC GGCATTGGCGGCCGGCTGGCCGGCAACCCGCACGCCTATTCGGCGTGGCT GTTCGTCGGCATCGCGCTCGTCATGCTGCCTTACGCGCTGTGGCGCGACG GCCGCGACGTCATTCCCGCAATGCGGATCTATTGGCGCCGCGGCCTTGCC GGCGGCGGCCTGCAACTGATGTCTTACGGCATCGCCATCTGGGCGATGGC GGTGGCGCCGATCGCCATCGTCGCCGCCTTGCGCGAGACCAGCGTGCTGT TCGGCGCGGCGATTGCCGTCGTCGTGCTGAAGGAGCCGGTGCGCATCGCC GCCGCGCTGATGATCGTCGGCGGGCTGGTGCTGATCCGGATGCAGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig56713:1..498+

>mRNA_P-wetherbeei_contig56713.1.1 ID=mRNA_P-wetherbeei_contig56713.1.1|Name=mRNA_P-wetherbeei_contig56713.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig56713:1..498+ (Phaeothamnion wetherbeei SAG_119_79)
CTGCTCGGCTGGGGCGGCATCGTCGCGCTGGTCGCCGGCGTCTTCCTGCT
GTCGGCGCGCGGCGGCCGCGATCTGGTGCGCGTCGACCGCCGCGCCGTCG
GCTTCGCGCTGCTCACCGCGCTGACCATCTGCGCCTATTCGGTGGTCGAC
GGCATTGGCGGCCGGCTGGCCGGCAACCCGCACGCCTATTCGGCGTGGCT
GTTCGTCGGCATCGCGCTCGTCATGCTGCCTTACGCGCTGTGGCGCGACG
GCCGCGACGTCATTCCCGCAATGCGGATCTATTGGCGCCGCGGCCTTGCC
GGCGGCGGCCTGCAACTGATGTCTTACGGCATCGCCATCTGGGCGATGGC
GGTGGCGCCGATCGCCATCGTCGCCGCCTTGCGCGAGACCAGCGTGCTGT
TCGGCGCGGCGATTGCCGTCGTCGTGCTGAAGGAGCCGGTGCGCATCGCC
GCCGCGCTGATGATCGTCGGCGGGCTGGTGCTGATCCGGATGCAGTAG
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