prot_P-wetherbeei_contig56696.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig56696.1.1
Unique Nameprot_P-wetherbeei_contig56696.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length171
Homology
BLAST of mRNA_P-wetherbeei_contig56696.1.1 vs. uniprot
Match: A0A2P2CES1_9ZZZZ (DNA helicase n=1 Tax=metagenome TaxID=256318 RepID=A0A2P2CES1_9ZZZZ)

HSP 1 Score: 305 bits (781), Expect = 1.380e-94
Identity = 152/171 (88.89%), Postives = 165/171 (96.49%), Query Frame = 0
Query:    1 LDPGGLRSLGEEHDLPELVSAGLFMEQYLTILDNLGATDYSDLIRRAVIEAEAHRDELRARWTHVFVDEYQDTDPGQVALLRALAGDGRNLTVVGDPHQSIYGFRGADVRGILDFPASFPTTSGEPAPVVVLQRTRRFGPRLLLAAGRVAHRLTLSGSIDAGAREAFLSPE 171
            LDP GLR LG EHDLPELV+AGLF+EQYLT+LD+LGATDY+DLIRRAVIEAEAHRDELRAR+ HVFVDEYQDTDPGQVALLRALAGDGRNLTVVGDPHQSIYGFRGADVRGILDFPASFPTT+G PAPVVVL+RTRRFGPR+LLAAGRVA RL+L+GSI+AGAREAFL+PE
Sbjct:  176 LDPAGLRGLGIEHDLPELVAAGLFLEQYLTVLDSLGATDYADLIRRAVIEAEAHRDELRARYHHVFVDEYQDTDPGQVALLRALAGDGRNLTVVGDPHQSIYGFRGADVRGILDFPASFPTTAGAPAPVVVLRRTRRFGPRILLAAGRVASRLSLTGSIEAGAREAFLAPE 346          
BLAST of mRNA_P-wetherbeei_contig56696.1.1 vs. uniprot
Match: A0A4Q2SBT7_9ACTN (DNA helicase n=7 Tax=Nocardioides TaxID=1839 RepID=A0A4Q2SBT7_9ACTN)

HSP 1 Score: 304 bits (779), Expect = 2.380e-94
Identity = 152/171 (88.89%), Postives = 162/171 (94.74%), Query Frame = 0
Query:    1 LDPGGLRSLGEEHDLPELVSAGLFMEQYLTILDNLGATDYSDLIRRAVIEAEAHRDELRARWTHVFVDEYQDTDPGQVALLRALAGDGRNLTVVGDPHQSIYGFRGADVRGILDFPASFPTTSGEPAPVVVLQRTRRFGPRLLLAAGRVAHRLTLSGSIDAGAREAFLSPE 171
            LDP GLR+LG EHDLPELV+AGLF+EQYLT+LDNLGATDYSDLIRRAVIEAE HRDELRARW+HVFVDEYQDTDPGQVALLRALAGDGRNLTVVGDPHQSIYGFRGADVRGILDFPASFPTT+G  APVVVLQRTRRFGPR+LLAAGRVA RL+L+GSI   AREAFL+PE
Sbjct:  167 LDPAGLRALGIEHDLPELVAAGLFLEQYLTVLDNLGATDYSDLIRRAVIEAETHRDELRARWSHVFVDEYQDTDPGQVALLRALAGDGRNLTVVGDPHQSIYGFRGADVRGILDFPASFPTTAGSSAPVVVLQRTRRFGPRILLAAGRVASRLSLTGSIAPDAREAFLAPE 337          
BLAST of mRNA_P-wetherbeei_contig56696.1.1 vs. uniprot
Match: A0A0Q6UMD8_9ACTN (DNA helicase n=1 Tax=Nocardioides sp. Root122 TaxID=1736431 RepID=A0A0Q6UMD8_9ACTN)

HSP 1 Score: 303 bits (776), Expect = 7.230e-94
Identity = 151/171 (88.30%), Postives = 163/171 (95.32%), Query Frame = 0
Query:    1 LDPGGLRSLGEEHDLPELVSAGLFMEQYLTILDNLGATDYSDLIRRAVIEAEAHRDELRARWTHVFVDEYQDTDPGQVALLRALAGDGRNLTVVGDPHQSIYGFRGADVRGILDFPASFPTTSGEPAPVVVLQRTRRFGPRLLLAAGRVAHRLTLSGSIDAGAREAFLSPE 171
            LDP GLR LG EHDLPELV+AGLF+EQYLT+LD+LGATDY+DLIRRAVIEAEAHRDELRAR+ HVFVDEYQDTDPGQVALLRALAGDGRNLTVVGDPHQSIYGFRGADVRGILDFPASFP  +G PAPVVVL+RTRRFGPR+LLAAGRVA RLTL+GSI+AGAREAFL+PE
Sbjct:  176 LDPAGLRGLGIEHDLPELVAAGLFLEQYLTVLDSLGATDYADLIRRAVIEAEAHRDELRARYDHVFVDEYQDTDPGQVALLRALAGDGRNLTVVGDPHQSIYGFRGADVRGILDFPASFPAATGAPAPVVVLRRTRRFGPRILLAAGRVASRLTLTGSIEAGAREAFLAPE 346          
BLAST of mRNA_P-wetherbeei_contig56696.1.1 vs. uniprot
Match: A0A4Z1CPD8_9ACTN (DNA helicase n=9 Tax=Nocardioides TaxID=1839 RepID=A0A4Z1CPD8_9ACTN)

HSP 1 Score: 301 bits (772), Expect = 2.420e-93
Identity = 150/171 (87.72%), Postives = 161/171 (94.15%), Query Frame = 0
Query:    1 LDPGGLRSLGEEHDLPELVSAGLFMEQYLTILDNLGATDYSDLIRRAVIEAEAHRDELRARWTHVFVDEYQDTDPGQVALLRALAGDGRNLTVVGDPHQSIYGFRGADVRGILDFPASFPTTSGEPAPVVVLQRTRRFGPRLLLAAGRVAHRLTLSGSIDAGAREAFLSPE 171
            LDP GLR+LG EHDLPELV+AGLF+EQYLT+LDNLGATDYSDLIRRAVIEAE HRDELRARW+HVFVDEYQDTDPGQVALLRALAGDGR+LTVVGDPHQSIYGFRGADVRGILDFPASFPT +G PAPVVVLQRTRRFGPR+LL AGRVA RL+L+GSI   AREAFL+PE
Sbjct:  167 LDPAGLRALGIEHDLPELVAAGLFLEQYLTVLDNLGATDYSDLIRRAVIEAETHRDELRARWSHVFVDEYQDTDPGQVALLRALAGDGRDLTVVGDPHQSIYGFRGADVRGILDFPASFPTAAGSPAPVVVLQRTRRFGPRILLGAGRVASRLSLTGSIAPEAREAFLAPE 337          
BLAST of mRNA_P-wetherbeei_contig56696.1.1 vs. uniprot
Match: A0A4Q2RV64_9ACTN (DNA helicase n=16 Tax=root TaxID=1 RepID=A0A4Q2RV64_9ACTN)

HSP 1 Score: 298 bits (762), Expect = 7.130e-92
Identity = 148/171 (86.55%), Postives = 162/171 (94.74%), Query Frame = 0
Query:    1 LDPGGLRSLGEEHDLPELVSAGLFMEQYLTILDNLGATDYSDLIRRAVIEAEAHRDELRARWTHVFVDEYQDTDPGQVALLRALAGDGRNLTVVGDPHQSIYGFRGADVRGILDFPASFPTTSGEPAPVVVLQRTRRFGPRLLLAAGRVAHRLTLSGSIDAGAREAFLSPE 171
            LDP GLR+LG EHDLPE+++AGLF+EQYLT+LDNLGATDYSDLIRRAVIEAEAHR ELRAR+ HVFVDEYQDTDPGQVALLRALAGDGR+LTVVGDPHQSIYGFRGADVRGILDFPA+FPT+SG PAPVVVL+RTRRFGPR+LL AGRVA RLTL+GSI + AREAFLSPE
Sbjct:  173 LDPAGLRALGIEHDLPEMIAAGLFLEQYLTVLDNLGATDYSDLIRRAVIEAEAHRGELRARYAHVFVDEYQDTDPGQVALLRALAGDGRDLTVVGDPHQSIYGFRGADVRGILDFPAAFPTSSGAPAPVVVLRRTRRFGPRILLGAGRVASRLTLTGSIGSEAREAFLSPE 343          
BLAST of mRNA_P-wetherbeei_contig56696.1.1 vs. uniprot
Match: UPI001FEAEC54 (ATP-dependent helicase n=1 Tax=Nocardioides piscis TaxID=2714938 RepID=UPI001FEAEC54)

HSP 1 Score: 277 bits (709), Expect = 5.960e-88
Identity = 141/171 (82.46%), Postives = 153/171 (89.47%), Query Frame = 0
Query:    1 LDPGGLRSLGEEHDLPELVSAGLFMEQYLTILDNLGATDYSDLIRRAVIEAEAHRDELRARWTHVFVDEYQDTDPGQVALLRALAGDGRNLTVVGDPHQSIYGFRGADVRGILDFPASFPTTSGEPAPVVVLQRTRRFGPRLLLAAGRVAHRLTLSGSIDAGAREAFLSPE 171
            LDP GL +LG  + LPELV+AG F+EQYLTILDNLGATDY DLIRRAVI AEAHR ELRAR++HVFVDEYQDTDPGQVALLRALAGDGRNLTVVGDPHQSIYGFRGADVRGILDFP  FPT+ G+ APV+VL+RTRRFGPRLLL AGR+A RL LSGSI A AREAFLSP+
Sbjct:  181 LDPTGLEALGAANGLPELVAAGRFLEQYLTILDNLGATDYPDLIRRAVITAEAHRHELRARFSHVFVDEYQDTDPGQVALLRALAGDGRNLTVVGDPHQSIYGFRGADVRGILDFPGQFPTSGGDRAPVLVLRRTRRFGPRLLLCAGRIAGRLPLSGSIGADAREAFLSPQ 351          
BLAST of mRNA_P-wetherbeei_contig56696.1.1 vs. uniprot
Match: UPI00055EF48C (UvrD-helicase domain-containing protein n=1 Tax=Nocardioides sp. CF8 TaxID=110319 RepID=UPI00055EF48C)

HSP 1 Score: 277 bits (709), Expect = 1.700e-86
Identity = 141/171 (82.46%), Postives = 153/171 (89.47%), Query Frame = 0
Query:    1 LDPGGLRSLGEEHDLPELVSAGLFMEQYLTILDNLGATDYSDLIRRAVIEAEAHRDELRARWTHVFVDEYQDTDPGQVALLRALAGDGRNLTVVGDPHQSIYGFRGADVRGILDFPASFPTTSGEPAPVVVLQRTRRFGPRLLLAAGRVAHRLTLSGSIDAGAREAFLSPE 171
            LDP GL +LG  + LPE V+AG F+EQYLTILDNLGATDY DLIRRAVI AEAHRDELRAR++HVFVDEYQDTDPGQVALLRALAGDGRNLTVVGDPHQSIYGFRGADVRGILDFP  FPT +GE APV+VL+RTRRFGPRLLLAAGR+A RL L+GSI   AREAFL+PE
Sbjct:  181 LDPDGLAALGAANGLPEFVAAGHFLEQYLTILDNLGATDYPDLIRRAVITAEAHRDELRARFSHVFVDEYQDTDPGQVALLRALAGDGRNLTVVGDPHQSIYGFRGADVRGILDFPGQFPTAAGERAPVLVLRRTRRFGPRLLLAAGRIAARLPLTGSIGPEAREAFLTPE 351          
BLAST of mRNA_P-wetherbeei_contig56696.1.1 vs. uniprot
Match: UPI00163D94F3 (ATP-dependent helicase n=2 Tax=unclassified Nocardioides TaxID=2615069 RepID=UPI00163D94F3)

HSP 1 Score: 275 bits (704), Expect = 1.420e-83
Identity = 140/171 (81.87%), Postives = 154/171 (90.06%), Query Frame = 0
Query:    1 LDPGGLRSLGEEHDLPELVSAGLFMEQYLTILDNLGATDYSDLIRRAVIEAEAHRDELRARWTHVFVDEYQDTDPGQVALLRALAGDGRNLTVVGDPHQSIYGFRGADVRGILDFPASFPTTSGEPAPVVVLQRTRRFGPRLLLAAGRVAHRLTLSGSIDAGAREAFLSPE 171
            LD   LR+LGEEH LPELV++GLF++QYLTILDNLGATD++DLIRRAVIE EAHRDELRAR++HVFVDEYQDTDPGQVALLRALAGDGR+L  VGDPHQSIYGFRGADVRGILDFPA FPT +GE APVVVL+RTRRFGPRLL A+ RVA RL L+GSIDA ARE FL PE
Sbjct:  179 LDGPALRALGEEHRLPELVASGLFLDQYLTILDNLGATDHADLIRRAVIEVEAHRDELRARFSHVFVDEYQDTDPGQVALLRALAGDGRDLVAVGDPHQSIYGFRGADVRGILDFPAQFPTRTGERAPVVVLRRTRRFGPRLLRASRRVAERLPLAGSIDARAREEFLHPE 349          
BLAST of mRNA_P-wetherbeei_contig56696.1.1 vs. uniprot
Match: A0A2R7Z078_9ACTN (DNA helicase n=1 Tax=Nocardioides currus TaxID=2133958 RepID=A0A2R7Z078_9ACTN)

HSP 1 Score: 275 bits (702), Expect = 2.760e-83
Identity = 139/171 (81.29%), Postives = 153/171 (89.47%), Query Frame = 0
Query:    1 LDPGGLRSLGEEHDLPELVSAGLFMEQYLTILDNLGATDYSDLIRRAVIEAEAHRDELRARWTHVFVDEYQDTDPGQVALLRALAGDGRNLTVVGDPHQSIYGFRGADVRGILDFPASFPTTSGEPAPVVVLQRTRRFGPRLLLAAGRVAHRLTLSGSIDAGAREAFLSPE 171
            LDP GL +LG  H LPE V+AG F+EQYLTILDNLGATD+ DLIRRAVI AEAHRDELRAR++HVFVDEYQDTDPGQV+LLRALAGDGRNLTVVGDPHQSIYGFRGADV GILDFP  FPTT+GE APV VL+RTRRFGPRLL+AAGR+A RL L+GSI A AR+AFL+PE
Sbjct:  181 LDPTGLEALGRTHGLPEFVAAGQFLEQYLTILDNLGATDHPDLIRRAVIIAEAHRDELRARFSHVFVDEYQDTDPGQVSLLRALAGDGRNLTVVGDPHQSIYGFRGADVHGILDFPDQFPTTAGERAPVQVLRRTRRFGPRLLVAAGRIAGRLPLTGSIGAEARDAFLTPE 351          
BLAST of mRNA_P-wetherbeei_contig56696.1.1 vs. uniprot
Match: UPI000D750701 (ATP-dependent helicase n=1 Tax=Nocardioides solisilvae TaxID=1542435 RepID=UPI000D750701)

HSP 1 Score: 273 bits (698), Expect = 1.010e-82
Identity = 139/171 (81.29%), Postives = 153/171 (89.47%), Query Frame = 0
Query:    1 LDPGGLRSLGEEHDLPELVSAGLFMEQYLTILDNLGATDYSDLIRRAVIEAEAHRDELRARWTHVFVDEYQDTDPGQVALLRALAGDGRNLTVVGDPHQSIYGFRGADVRGILDFPASFPTTSGEPAPVVVLQRTRRFGPRLLLAAGRVAHRLTLSGSIDAGAREAFLSPE 171
            LD   LR+LG EH  PELV+AGLF++QYLTILDNLGATD++DL+RRAV+EAEAHRDELRAR++HVFVDEYQDTDPGQVALLRALAGDGR+LTVVGDPHQSIYGFRGA+VRGILDFPA FPT  G  APVVVL+ TRRFGPRLL AAGRVA RL L+GSIDA ARE FL PE
Sbjct:  179 LDGPALRALGLEHGAPELVAAGLFLDQYLTILDNLGATDHADLVRRAVLEAEAHRDELRARFSHVFVDEYQDTDPGQVALLRALAGDGRDLTVVGDPHQSIYGFRGAEVRGILDFPAQFPTREGARAPVVVLRTTRRFGPRLLTAAGRVAARLPLAGSIDARAREEFLHPE 349          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56696.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2P2CES1_9ZZZZ1.380e-9488.89DNA helicase n=1 Tax=metagenome TaxID=256318 RepID... [more]
A0A4Q2SBT7_9ACTN2.380e-9488.89DNA helicase n=7 Tax=Nocardioides TaxID=1839 RepID... [more]
A0A0Q6UMD8_9ACTN7.230e-9488.30DNA helicase n=1 Tax=Nocardioides sp. Root122 TaxI... [more]
A0A4Z1CPD8_9ACTN2.420e-9387.72DNA helicase n=9 Tax=Nocardioides TaxID=1839 RepID... [more]
A0A4Q2RV64_9ACTN7.130e-9286.55DNA helicase n=16 Tax=root TaxID=1 RepID=A0A4Q2RV6... [more]
UPI001FEAEC545.960e-8882.46ATP-dependent helicase n=1 Tax=Nocardioides piscis... [more]
UPI00055EF48C1.700e-8682.46UvrD-helicase domain-containing protein n=1 Tax=No... [more]
UPI00163D94F31.420e-8381.87ATP-dependent helicase n=2 Tax=unclassified Nocard... [more]
A0A2R7Z078_9ACTN2.760e-8381.29DNA helicase n=1 Tax=Nocardioides currus TaxID=213... [more]
UPI000D7507011.010e-8281.29ATP-dependent helicase n=1 Tax=Nocardioides solisi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014016UvrD-like helicase, ATP-binding domainPFAMPF00580UvrD-helicasecoord: 21..119
e-value: 1.9E-26
score: 93.4
IPR014016UvrD-like helicase, ATP-binding domainPROSITEPS51198UVRD_HELICASE_ATP_BINDcoord: 1..139
score: 20.763741
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 12..123
e-value: 2.2E-29
score: 105.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 19..152
IPR000212DNA helicase, UvrD/REP typePANTHERPTHR11070UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBERcoord: 20..151
NoneNo IPR availablePANTHERPTHR11070:SF59POSSIBLE ATP-DEPENDENT DNA HELICASEcoord: 20..151
NoneNo IPR availableCDDcd17932DEXQc_UvrDcoord: 39..123
e-value: 6.73715E-38
score: 126.476

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56696contigP-wetherbeei_contig56696:2..514 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56696.1.1mRNA_P-wetherbeei_contig56696.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig56696 2..514 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig56696.1.1 ID=prot_P-wetherbeei_contig56696.1.1|Name=mRNA_P-wetherbeei_contig56696.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=171bp
LDPGGLRSLGEEHDLPELVSAGLFMEQYLTILDNLGATDYSDLIRRAVIE
AEAHRDELRARWTHVFVDEYQDTDPGQVALLRALAGDGRNLTVVGDPHQS
IYGFRGADVRGILDFPASFPTTSGEPAPVVVLQRTRRFGPRLLLAAGRVA
HRLTLSGSIDAGAREAFLSPE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014016UvrD-like_ATP-bd
IPR027417P-loop_NTPase
IPR000212DNA_helicase_UvrD/REP