prot_P-wetherbeei_contig56680.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig56680.1.1
Unique Nameprot_P-wetherbeei_contig56680.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length72
Homology
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BLAST of mRNA_P-wetherbeei_contig56680.1.1 vs. uniprot
Match: A0A6P1J4U9_9BURK (Tetratricopeptide repeat protein n=1 Tax=Hydrogenophaga sp. BPS33 TaxID=2651974 RepID=A0A6P1J4U9_9BURK)

HSP 1 Score: 73.6 bits (179), Expect = 1.350e-13
Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 0 
Query:   23 RHAQAWVERGSALKRLNRTAEAVGSFEKALALEPGLVSAHTSLAATALSD 72
            RHA AWVERG ALK L+RTA+AVGS+EKALAL P L+SAHT LAAT LSD
Sbjct:  210 RHAPAWVERGGALKMLDRTADAVGSYEKALALAPELLSAHTGLAATVLSD 259
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BLAST of mRNA_P-wetherbeei_contig56680.1.1 vs. uniprot
Match: A0A8J5XHK7_DIALT (CS domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XHK7_DIALT)

HSP 1 Score: 55.8 bits (133), Expect = 2.350e-7
Identity = 30/55 (54.55%), Postives = 40/55 (72.73%), Query Frame = 0 
Query:    3 ELGRYEDALARAERAVHAHPRHAQAWVERGSALKRLNRTAEAVGSFEKALALEPG 57
            +LGRYE ALA A+ A+   P HA+A   RG AL+ L+R AEA+G+F +A+ LEPG
Sbjct:  507 KLGRYEQALADADGALALAPTHAKAAFRRGLALQALDRYAEAIGAFSRAVELEPG 561
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56680.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6P1J4U9_9BURK1.350e-1378.00Tetratricopeptide repeat protein n=1 Tax=Hydrogeno... [more]
A0A8J5XHK7_DIALT2.350e-754.55CS domain-containing protein n=1 Tax=Diacronema lu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 25..58
e-value: 8.5E-4
score: 28.6
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 25..58
score: 10.5319
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..71
e-value: 2.9E-16
score: 61.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..68
NoneNo IPR availablePFAMPF13432TPR_16coord: 4..56
e-value: 6.4E-10
score: 39.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56680contigP-wetherbeei_contig56680:291..506 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56680.1.1mRNA_P-wetherbeei_contig56680.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig56680 291..506 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig56680.1.1 ID=prot_P-wetherbeei_contig56680.1.1|Name=mRNA_P-wetherbeei_contig56680.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=72bp
LNELGRYEDALARAERAVHAHPRHAQAWVERGSALKRLNRTAEAVGSFEK
ALALEPGLVSAHTSLAATALSD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf