mRNA_P-wetherbeei_contig56564.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig56564.1.1 vs. uniprot
Match: UPI0019B88BED (Uncharacterized protein n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019B88BED) HSP 1 Score: 145 bits (366), Expect = 3.530e-37 Identity = 82/176 (46.59%), Postives = 110/176 (62.50%), Query Frame = 1
Query: 1 IALRLMPWANAALNNFVSLDWGYDDASVRQFDHDTAAHLPARLLRPIEGRDGLAAERYGWLMKNAREAWIAWRCERVAQLHGRVLDRIRRARPDLRLFASVF-AWGPQGTLEELRQAGIDPARLQRIDGLTLINAQYTYGRRDPDAAHNERQLRRLTD----PGPLAML--AGAPG 507
++LRLM WAN ALNNF SLDWGYDD +V +F + +P +E G A RY W+M NA+ WI WRCE++A+L+ R +R+RRARPDL+L+++VF A+ + LR+AGIDP RL RI G+ L+N+ + YGRR + ER + D P L L AGAPG
Sbjct: 607 VSLRLMQWANPALNNFQSLDWGYDDYTVGRFVAERGIAVPMG----VETDTGRHAARYRWIMANAKADWIDWRCEKIAELYARAANRLRRARPDLQLYSTVFDAYPSEHGAGWLREAGIDPVRLARIPGVVLVNSLHAYGRR-----YEERTTQGTRDNLLVPEVLNALRPAGAPG 773
BLAST of mRNA_P-wetherbeei_contig56564.1.1 vs. uniprot
Match: A0A7V3AE32_9BACT (LamGL domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V3AE32_9BACT) HSP 1 Score: 132 bits (331), Expect = 1.830e-32 Identity = 76/173 (43.93%), Postives = 107/173 (61.85%), Query Frame = 1
Query: 1 IALRLMPWANAALNNFVSLDWGYDDASVRQFDHDTAAHLPARLLRPIEGRDGLAAERYGWLMKNAREAWIAWRCERVAQLHGRVLDRIRRARPDLRLFASVFAWGPQGTLEELRQAGIDPARLQRIDGLTLINAQYTYGRR--DPDAAHNERQLR-RLTDPGPLAMLAGAPGQ 510
++LRLM WAN ALNNF SLDWGYDD +V F+ +T ++P + R + R+ WLM NARE WI WRCE++AQL DR+R++RPDL+++A+ G L+ R++GIDP RL +DG+ L+NA++ YGRR + + +R L DP LA G G+
Sbjct: 584 VSLRLMGWANPALNNFHSLDWGYDDLTVGLFEKETGLRTG---VKPDDPRR--FSLRHEWLMANAREKWIDWRCEKIAQLFAAARDRVRQSRPDLKVYANHC-----GDLD--RESGIDPQRLGALDGVVLVNARHGYGRRAYTYEGYLADTVMRWNLLDPAALASTRGPDGR 744
BLAST of mRNA_P-wetherbeei_contig56564.1.1 vs. uniprot
Match: A0A848AXL5_9BACT (Uncharacterized protein n=1 Tax=Victivallis vadensis TaxID=172901 RepID=A0A848AXL5_9BACT) HSP 1 Score: 118 bits (295), Expect = 1.270e-27 Identity = 68/160 (42.50%), Postives = 92/160 (57.50%), Query Frame = 1
Query: 1 IALRLMPWANAALNNFVSLDWGYDDASVRQFDHDTAAHLPARLLRPIEGRDGLAAERYGWLMKNAREAWIAWRCERVAQLHGRVLDRIRRARPDLRLFASVFAWGPQGTLEELRQAGIDPARLQRIDGLTLINAQYTYGRRDPDAAHNERQLRRLTDPGP 480
I+LR M WAN ALNNF SLDWGYDD +V +F+ +T LP + P R L R+ LMK+ R+ WI WRCE++A+L+ + +R+ARPDL L+ G AG+DP RL IDG+ + + +YGRR + ER L+ L P P
Sbjct: 567 ISLRNMQWANPALNNFHSLDWGYDDFTVGEFERETGIRLPVKADDP--DRFEL---RHAELMKHHRDRWIDWRCEKIAELYRELAGILRQARPDLSLYVETMERG----------AGVDPGRLAAIDGVVVFSGS-SYGRRGRGENNRERFLQMLLKPEP 710
BLAST of mRNA_P-wetherbeei_contig56564.1.1 vs. uniprot
Match: UPI001AE629B8 (hypothetical protein n=1 Tax=Neorhizobium galegae TaxID=399 RepID=UPI001AE629B8) HSP 1 Score: 111 bits (278), Expect = 2.340e-25 Identity = 65/169 (38.46%), Postives = 89/169 (52.66%), Query Frame = 1
Query: 1 IALRLMPWANAALNNFVSLDWGYDDASVRQFDHDTAAHLPARLLRPIEGRDGLAAERYGWLMKNAREAWIAWRCERVAQLHGRVLDRIRRARPDLRLFASVFAWG--PQGTLEELRQAGIDPARLQRIDGLTLINAQYTYGRRDPDAAHNERQLRRLTDPGPLAMLAGA 501
+ LR+ W N++LNNFVSL+WGYD A+V +F HDT PA L + DG A RY L R W+ WRC ++ + + +R RPDL + +V A G Q EELR+ GID L I GL LI+ +++YG ++ A P L+ LA A
Sbjct: 579 VQLRVSQWVNSSLNNFVSLEWGYDAATVSRFFHDTGLVPPAGLDLSNDTPDGAHA-RYAILTGKFRARWVTWRCVQIRDIFADITAAVRAIRPDLTVSINVSAMGHGQQPGYEELREIGIDSILLAAIPGLHLIDGRFSYGNKESGTAWQNYLRTAALAPDALSALAPA 746
BLAST of mRNA_P-wetherbeei_contig56564.1.1 vs. uniprot
Match: A0A1G1C507_9BACT (Uncharacterized protein n=1 Tax=Lentisphaerae bacterium RIFOXYB12_FULL_65_16 TaxID=1798581 RepID=A0A1G1C507_9BACT) HSP 1 Score: 110 bits (274), Expect = 8.360e-25 Identity = 58/141 (41.13%), Postives = 84/141 (59.57%), Query Frame = 1
Query: 1 IALRLMPWANAALNNFVSLDWGYDDASVRQFDHDTAAHLPARLLRPIEGRDGLAAERYGWLMKNAREAWIAWRCERVAQLHGRVLDRIRRARPDLRLFASVFAWGPQGTLEELRQAGIDPARLQRIDGLTLINAQYTYGRR 423
+ LR M WAN AL NF SLDWGY+D +V F+ +T +P P GR G +R+ WL+ NAR+ W+ WRC+++ L R R+R+ARPDL++ + F + G+D ARL IDG++++N +YGRR
Sbjct: 581 VCLRQMEWANPALWNFHSLDWGYEDFTVGLFEKETGVTVPVAGDAP--GRFG---KRHAWLLANARDRWVTWRCDKIVDLFTRTAQRVRQARPDLQVLTNRFDV----------ERGVDNARLAAIDGVSVVNGA-SYGRR 705
BLAST of mRNA_P-wetherbeei_contig56564.1.1 vs. uniprot
Match: A0A2M7A7J0_9BACT (Uncharacterized protein n=1 Tax=Armatimonadetes bacterium CG07_land_8_20_14_0_80_59_28 TaxID=1973917 RepID=A0A2M7A7J0_9BACT) HSP 1 Score: 98.6 bits (244), Expect = 8.890e-21 Identity = 57/150 (38.00%), Postives = 87/150 (58.00%), Query Frame = 1
Query: 1 IALRLMPWANAALNNFVSLDWGYDDASVRQFDHDTAAHLPARLLRPIEGRDGLAAERYGWLMKNA-REAWIAWRCERVAQLHGRVLDRIRRARPDLRLFASVFAWG---PQGTL-----EELRQAGIDPARLQRIDGLTLINAQYTYGRR 423
++ RLM W + N SL+WGY+D ++ QF+ +T +P P A R+ +L +A +E W++WRC +V LH R+ DRIR+A+P +L+ + + G P G+L E+LR+ GIDPA Q+ G+ LI A +YGRR
Sbjct: 577 LSSRLMNWVWQSWNAIPSLNWGYEDWTITQFEKETGVKVPGAPNDPER-----FARRFEFLTSSAMKEKWLSWRCSKVLDLHRRIRDRIRKAKPTAKLYFTYWGGGMDYPFGSLGQTETEKLRETGIDPALYQKEPGIALIPAA-SYGRR 720
BLAST of mRNA_P-wetherbeei_contig56564.1.1 vs. uniprot
Match: A0A0N8GEL9_9HYPH (Uncharacterized protein n=1 Tax=Prosthecomicrobium hirschii TaxID=665126 RepID=A0A0N8GEL9_9HYPH) HSP 1 Score: 97.4 bits (241), Expect = 1.680e-20 Identity = 56/148 (37.84%), Postives = 78/148 (52.70%), Query Frame = 1
Query: 1 IALRLMPWANAALNNFVSLDWGYDDASVRQFDHDTAAHLPARLLRPIEGRDGLAAERYGWLMKNAREAWIAWRCERVAQLHGRVLDRIRRARPDLRLFASVFAW----GPQGTLEELRQAGIDPARLQRIDGLTLINAQYTYGRRDPD 432
I LR+ WAN A NN VSLDWGYD A+VR+F DTA P + D A R+ +L REAW+ WRC ++ + ++ +R ARPDL + A P + LR+ G+DP L+ + GL L+ + YG + D
Sbjct: 165 ITLRVSEWANPAFNNLVSLDWGYDAATVRRFLGDTAVVPPTAFDLQSDTPDAAVA-RHTFLTGVPREAWVDWRCRQLRDVLADIVATVRAARPDLVVSLHFSAMTRDRDPALDRQRLRELGLDPWLLRDLPGLELVEGRLAYGSKQLD 311
BLAST of mRNA_P-wetherbeei_contig56564.1.1 vs. uniprot
Match: A0A7X9B0W6_9BACT (LamG domain-containing protein n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7X9B0W6_9BACT) HSP 1 Score: 93.2 bits (230), Expect = 6.620e-19 Identity = 66/185 (35.68%), Postives = 90/185 (48.65%), Query Frame = 1
Query: 1 IALRLMPWANAALNNFVSLDWGYDDASVRQFDHDTAAHLPARLLRPIEGRDGLAAERYGWLMKNAREAWIAWRCERVAQLHGRVLDRIRRARPDLRLFASVFAWGPQGTLEE------------LRQAGIDPARLQRIDGLTL----INAQYTYGRRDPDAAHNERQLRRLTD-PGPLAMLAGAP 504
IAL L N L +F L GY+D + F T +P P+ G+ Y WLM NARE WI WRC+ +A+ +GR+ +R+R+ARPDLRL V GP G +++ R G+DP L I +TL I A+Y + R + N + LR PG + LA AP
Sbjct: 861 IALHL---TNHCLASFGELSAGYNDYVIDAFSRATGIAVPVSRQEPLRGK-----LYYEWLMANAREEWIDWRCQALAEFYGRIAERLRQARPDLRLL--VCNLGPMGEVKDEKFRDEDFARQRYRGMGLDPKYLTTIPNVTLMQTIIPAEYRWRRGHGSSDPNLQHLRNFDLLPGTYSFLATAP 1035
BLAST of mRNA_P-wetherbeei_contig56564.1.1 vs. uniprot
Match: A0A7V3UYY2_9BACT (GHL10 domain-containing protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V3UYY2_9BACT) HSP 1 Score: 90.5 bits (223), Expect = 5.370e-18 Identity = 51/139 (36.69%), Postives = 71/139 (51.08%), Query Frame = 1
Query: 46 FVSLDWGYDDASVRQFDHDTAAHLPARLLRPIEGRDGLA--AERYGWLMKNAREAWIAWRCERVAQLHGRVLDRIRRARPDLRLFASVF--------------AWGPQGTLEE--LRQAGIDPARLQRIDGLTLINAQY 408
F S+ GYDD +V F+ +T H+PA + G A ++R+ WLM NARE WI WRCE++ LH + DRIRR RPDL+L+ + + AW P G E R+ G D + + G+ L Y
Sbjct: 549 FGSIQSGYDDFTVGLFEKETGIHVPA-------DKTGAARFSQRFRWLMANARERWIEWRCEKIRDLHKDLADRIRRRRPDLKLYLTFYHVDGHNWNPMYNLDAWRPGGRSTEQIYREGGFDMRLYRNLSGIVLRRVMY 680
BLAST of mRNA_P-wetherbeei_contig56564.1.1 vs. uniprot
Match: A0A7X7FHR7_9BACT (LamG domain-containing protein n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7X7FHR7_9BACT) HSP 1 Score: 87.4 bits (215), Expect = 6.810e-17 Identity = 54/158 (34.18%), Postives = 77/158 (48.73%), Query Frame = 1
Query: 28 NAALNNFVSLDWGYDDASVRQFDHDTAAHLPARLLRPIEGRDGLAAERYGWLMKNAREAWIAWRCERVAQLHGRVLDRIRRARPDLRLFASVFAWGPQGTL------------EELRQAGIDPARLQRIDGLTLIN----AQYTY----GRRDPDAAH 441
N L +F L GY+D + F T +P P+ G+ Y WLM NAR+ WI WRC+ +A+ +GR+ +R+R+ARPDLRL + GP G + + R AG+DP L I +TL+ A Y + G DP+ H
Sbjct: 867 NHCLASFGELSAGYNDYVIDAFSRATGIAVPVSRQEPLRGK-----LYYEWLMANARQEWIDWRCQALAEFYGRIAERLRQARPDLRLV--ICNLGPMGEVKSENFRDEDFVTQRYRGAGLDPKYLTAIPNVTLVQTTIPADYRWRRGHGSTDPNLLH 1017 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56564.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig56564.1.1 >prot_P-wetherbeei_contig56564.1.1 ID=prot_P-wetherbeei_contig56564.1.1|Name=mRNA_P-wetherbeei_contig56564.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=165bp MPWANAALNNFVSLDWGYDDASVRQFDHDTAAHLPARLLRPIEGRDGLAAback to top mRNA from alignment at P-wetherbeei_contig56564:1..510+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig56564.1.1 ID=mRNA_P-wetherbeei_contig56564.1.1|Name=mRNA_P-wetherbeei_contig56564.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig56564:1..510+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig56564:1..510+ >mRNA_P-wetherbeei_contig56564.1.1 ID=mRNA_P-wetherbeei_contig56564.1.1|Name=mRNA_P-wetherbeei_contig56564.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=495bp|location=Sequence derived from alignment at P-wetherbeei_contig56564:1..510+ (Phaeothamnion wetherbeei SAG_119_79)back to top |