mRNA_P-wetherbeei_contig56406.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig56406.1.1
Unique NamemRNA_P-wetherbeei_contig56406.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig56406.1.1 vs. uniprot
Match: UPI001746F2A0 (MBL fold metallo-hydrolase n=1 Tax=Mucilaginibacter glaciei TaxID=2772109 RepID=UPI001746F2A0)

HSP 1 Score: 87.0 bits (214), Expect = 1.210e-19
Identity = 37/39 (94.87%), Postives = 37/39 (94.87%), Query Frame = 1 
Query:    1 MKLHVIDTGFFKLDGGAMFGVVPKSIWQKTNPPDDNNLC 117
            MKLH IDTGFFKLDGGAMFGVVPKSIWQKTNP DDNNLC
Sbjct:    1 MKLHTIDTGFFKLDGGAMFGVVPKSIWQKTNPADDNNLC 39
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BLAST of mRNA_P-wetherbeei_contig56406.1.1 vs. uniprot
Match: A0A1G7BGW0_9SPHI (Glyoxylase, beta-lactamase superfamily II n=1 Tax=Mucilaginibacter pineti TaxID=1391627 RepID=A0A1G7BGW0_9SPHI)

HSP 1 Score: 85.9 bits (211), Expect = 3.320e-19
Identity = 36/39 (92.31%), Postives = 37/39 (94.87%), Query Frame = 1 
Query:    1 MKLHVIDTGFFKLDGGAMFGVVPKSIWQKTNPPDDNNLC 117
            MKLH IDTGFFKLDGGAMFGVVPK+IWQKTNP DDNNLC
Sbjct:    1 MKLHTIDTGFFKLDGGAMFGVVPKAIWQKTNPADDNNLC 39
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BLAST of mRNA_P-wetherbeei_contig56406.1.1 vs. uniprot
Match: A0A136LRE2_9BACT (Zn-dependent hydrolase n=1 Tax=Bacteroidetes bacterium OLB12 TaxID=1619897 RepID=A0A136LRE2_9BACT)

HSP 1 Score: 84.0 bits (206), Expect = 3.710e-19
Identity = 35/39 (89.74%), Postives = 37/39 (94.87%), Query Frame = 1 
Query:    1 MKLHVIDTGFFKLDGGAMFGVVPKSIWQKTNPPDDNNLC 117
            M LHVI+TGFFKLDGGAMFGVVPKSIWQKTNPPD+ NLC
Sbjct:    1 MNLHVINTGFFKLDGGAMFGVVPKSIWQKTNPPDERNLC 39
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BLAST of mRNA_P-wetherbeei_contig56406.1.1 vs. uniprot
Match: UPI0003734732 (MBL fold metallo-hydrolase n=2 Tax=Pontibacter TaxID=323449 RepID=UPI0003734732)

HSP 1 Score: 85.5 bits (210), Expect = 4.710e-19
Identity = 35/39 (89.74%), Postives = 38/39 (97.44%), Query Frame = 1 
Query:    1 MKLHVIDTGFFKLDGGAMFGVVPKSIWQKTNPPDDNNLC 117
            MKLHVIDTGFFKLDGGAMFGVVPK++WQ+TNP DDNNLC
Sbjct:    1 MKLHVIDTGFFKLDGGAMFGVVPKTLWQRTNPADDNNLC 39
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BLAST of mRNA_P-wetherbeei_contig56406.1.1 vs. uniprot
Match: A0A3D8LBY9_9BACT (MBL fold metallo-hydrolase n=2 Tax=Pontibacter TaxID=323449 RepID=A0A3D8LBY9_9BACT)

HSP 1 Score: 85.1 bits (209), Expect = 6.600e-19
Identity = 35/39 (89.74%), Postives = 38/39 (97.44%), Query Frame = 1 
Query:    1 MKLHVIDTGFFKLDGGAMFGVVPKSIWQKTNPPDDNNLC 117
            MKLHVIDTGFFKLDGGAMFGVVPKS+WQ+TNP D+NNLC
Sbjct:    1 MKLHVIDTGFFKLDGGAMFGVVPKSLWQRTNPADENNLC 39
[Close]
BLAST of mRNA_P-wetherbeei_contig56406.1.1 vs. uniprot
Match: A0A2U1B1D7_9BACT (Glyoxylase-like metal-dependent hydrolase (Beta-lactamase superfamily II) n=8 Tax=Pontibacter TaxID=323449 RepID=A0A2U1B1D7_9BACT)

HSP 1 Score: 85.1 bits (209), Expect = 6.600e-19
Identity = 35/39 (89.74%), Postives = 38/39 (97.44%), Query Frame = 1 
Query:    1 MKLHVIDTGFFKLDGGAMFGVVPKSIWQKTNPPDDNNLC 117
            MKLHVIDTGFFKLDGGAMFGVVPKS+WQ+TNP D+NNLC
Sbjct:    1 MKLHVIDTGFFKLDGGAMFGVVPKSLWQRTNPADENNLC 39
[Close]
BLAST of mRNA_P-wetherbeei_contig56406.1.1 vs. uniprot
Match: A0A1I7G6K4_9BACT (Glyoxylase, beta-lactamase superfamily II n=1 Tax=Pontibacter akesuensis TaxID=388950 RepID=A0A1I7G6K4_9BACT)

HSP 1 Score: 85.1 bits (209), Expect = 6.600e-19
Identity = 35/39 (89.74%), Postives = 38/39 (97.44%), Query Frame = 1 
Query:    1 MKLHVIDTGFFKLDGGAMFGVVPKSIWQKTNPPDDNNLC 117
            MKLHVIDTGFFKLDGGAMFGVVPKS+WQ+TNP D+NNLC
Sbjct:    1 MKLHVIDTGFFKLDGGAMFGVVPKSLWQRTNPADENNLC 39
[Close]
BLAST of mRNA_P-wetherbeei_contig56406.1.1 vs. uniprot
Match: A0A1Q5PGS8_9BACT (MBL fold metallo-hydrolase n=1 Tax=Pontibacter flavimaris TaxID=1797110 RepID=A0A1Q5PGS8_9BACT)

HSP 1 Score: 85.1 bits (209), Expect = 6.600e-19
Identity = 35/39 (89.74%), Postives = 38/39 (97.44%), Query Frame = 1 
Query:    1 MKLHVIDTGFFKLDGGAMFGVVPKSIWQKTNPPDDNNLC 117
            MKLHVIDTGFFKLDGGAMFGVVPKS+WQ+TNP D+NNLC
Sbjct:    1 MKLHVIDTGFFKLDGGAMFGVVPKSLWQRTNPADENNLC 39
[Close]
BLAST of mRNA_P-wetherbeei_contig56406.1.1 vs. uniprot
Match: UPI0018AFBEC8 (MBL fold metallo-hydrolase n=1 Tax=Pontibacter sp. 172403-2 TaxID=2791028 RepID=UPI0018AFBEC8)

HSP 1 Score: 85.1 bits (209), Expect = 6.600e-19
Identity = 35/39 (89.74%), Postives = 38/39 (97.44%), Query Frame = 1 
Query:    1 MKLHVIDTGFFKLDGGAMFGVVPKSIWQKTNPPDDNNLC 117
            MKLHVIDTGFFKLDGGAMFGVVPKS+WQ+TNP D+NNLC
Sbjct:    1 MKLHVIDTGFFKLDGGAMFGVVPKSLWQRTNPADENNLC 39
[Close]
BLAST of mRNA_P-wetherbeei_contig56406.1.1 vs. uniprot
Match: A0A3E2NTV1_9SPHI (MBL fold metallo-hydrolase n=1 Tax=Mucilaginibacter terrenus TaxID=2482727 RepID=A0A3E2NTV1_9SPHI)

HSP 1 Score: 84.7 bits (208), Expect = 9.100e-19
Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 1 
Query:    1 MKLHVIDTGFFKLDGGAMFGVVPKSIWQKTNPPDDNNLC 117
            MKLH IDTGFFKLDGGAMFGVVPKSIWQKTNP D NNLC
Sbjct:    1 MKLHTIDTGFFKLDGGAMFGVVPKSIWQKTNPADSNNLC 39
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56406.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001746F2A01.210e-1994.87MBL fold metallo-hydrolase n=1 Tax=Mucilaginibacte... [more]
A0A1G7BGW0_9SPHI3.320e-1992.31Glyoxylase, beta-lactamase superfamily II n=1 Tax=... [more]
A0A136LRE2_9BACT3.710e-1989.74Zn-dependent hydrolase n=1 Tax=Bacteroidetes bacte... [more]
UPI00037347324.710e-1989.74MBL fold metallo-hydrolase n=2 Tax=Pontibacter Tax... [more]
A0A3D8LBY9_9BACT6.600e-1989.74MBL fold metallo-hydrolase n=2 Tax=Pontibacter Tax... [more]
A0A2U1B1D7_9BACT6.600e-1989.74Glyoxylase-like metal-dependent hydrolase (Beta-la... [more]
A0A1I7G6K4_9BACT6.600e-1989.74Glyoxylase, beta-lactamase superfamily II n=1 Tax=... [more]
A0A1Q5PGS8_9BACT6.600e-1989.74MBL fold metallo-hydrolase n=1 Tax=Pontibacter fla... [more]
UPI0018AFBEC86.600e-1989.74MBL fold metallo-hydrolase n=1 Tax=Pontibacter sp.... [more]
A0A3E2NTV1_9SPHI9.100e-1992.31MBL fold metallo-hydrolase n=1 Tax=Mucilaginibacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56406contigP-wetherbeei_contig56406:402..518 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1237149.C900_00003
PFAMsLactamase_B
Model size117
Max annot lvl976|Bacteroidetes
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue5.8e-19
EggNOG OGsCOG0491@1|root,COG0491@2|Bacteria,4NE98@976|Bacteroidetes,47JCR@768503|Cytophagia
DescriptionPFAM Metallo-beta-lactamase superfamily
Cds size117
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186838.7014604-CDS-P-wetherbeei_contig56406:401..5181683186838.7014604-CDS-P-wetherbeei_contig56406:401..518Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig56406 402..518 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56406.1.1prot_P-wetherbeei_contig56406.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig56406 402..518 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig56406.1.1

>prot_P-wetherbeei_contig56406.1.1 ID=prot_P-wetherbeei_contig56406.1.1|Name=mRNA_P-wetherbeei_contig56406.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=39bp
MKLHVIDTGFFKLDGGAMFGVVPKSIWQKTNPPDDNNLC
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mRNA from alignment at P-wetherbeei_contig56406:402..518+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig56406.1.1 ID=mRNA_P-wetherbeei_contig56406.1.1|Name=mRNA_P-wetherbeei_contig56406.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=117bp|location=Sequence derived from alignment at P-wetherbeei_contig56406:402..518+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAACTTCACGTTATTGATACCGGTTTCTTTAAGCTTGACGGTGGTGC
TATGTTTGGCGTTGTGCCGAAAAGCATCTGGCAAAAAACAAACCCGCCCG
ATGATAACAACCTCTGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig56406:402..518+

>mRNA_P-wetherbeei_contig56406.1.1 ID=mRNA_P-wetherbeei_contig56406.1.1|Name=mRNA_P-wetherbeei_contig56406.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=117bp|location=Sequence derived from alignment at P-wetherbeei_contig56406:402..518+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAACTTCACGTTATTGATACCGGTTTCTTTAAGCTTGACGGTGGTGC
TATGTTTGGCGTTGTGCCGAAAAGCATCTGGCAAAAAACAAACCCGCCCG
ATGATAACAACCTCTGC
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