prot_P-wetherbeei_contig56370.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig56370.1.1
Unique Nameprot_P-wetherbeei_contig56370.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length103
Homology
BLAST of mRNA_P-wetherbeei_contig56370.1.1 vs. uniprot
Match: UPI001C3E7A0B (TetR/AcrR family transcriptional regulator n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3E7A0B)

HSP 1 Score: 123 bits (309), Expect = 3.380e-33
Identity = 65/100 (65.00%), Postives = 70/100 (70.00%), Query Frame = 0
Query:    2 EAVGSEIFGSARLREARLRVAAPMEGLLRRAQEAGRVRRDLEPLDVFFLITAAGHVSPCHFEIPGLWRRYLGVILDGMRPLEASPLTPAAPSFDEFEAAL 101
            E   S++ GS  LR AR RV AP   LL RAQ AG VR DL P+DV FLITAAGH  PC  +IP LWRRYLGVILDGMRP  ASPL+  APS  E EAAL
Sbjct:  106 ETASSDVVGSPELRGARDRVTAPFAALLERAQAAGVVRDDLVPVDVLFLITAAGHAQPCQLQIPDLWRRYLGVILDGMRPAAASPLSGPAPSLGEIEAAL 205          
BLAST of mRNA_P-wetherbeei_contig56370.1.1 vs. uniprot
Match: UPI001C3D12B6 (TetR/AcrR family transcriptional regulator n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3D12B6)

HSP 1 Score: 114 bits (286), Expect = 1.000e-29
Identity = 63/100 (63.00%), Postives = 70/100 (70.00%), Query Frame = 0
Query:    2 EAVGSEIFGSARLREARLRVAAPMEGLLRRAQEAGRVRRDLEPLDVFFLITAAGHVSPCHFEIPGLWRRYLGVILDGMRPLEASPLTPAAPSFDEFEAAL 101
            +A  S + GS RLREAR R+ AP   LLRRAQ AG VR DLEP DV FL+TAA   +P    +PGLWRRY+ VILDGMRP  ASPL  AAPS  E EAAL
Sbjct:  105 DAATSRMIGSPRLREARRRITAPFGDLLRRAQAAGVVRADLEPEDVIFLVTAATSAAPRPLRMPGLWRRYMAVILDGMRPAGASPLPVAAPSPGELEAAL 204          
BLAST of mRNA_P-wetherbeei_contig56370.1.1 vs. uniprot
Match: UPI001FEE4EB4 (TetR/AcrR family transcriptional regulator n=1 Tax=Patulibacter sp. SYSU D01012 TaxID=2817381 RepID=UPI001FEE4EB4)

HSP 1 Score: 80.1 bits (196), Expect = 2.110e-16
Identity = 47/107 (43.93%), Postives = 65/107 (60.75%), Query Frame = 0
Query:    1 MEAVGSEIFGSARLREARLRVAAPMEGLLRRAQEAGRVRRDLEPLDVFFLITAAGHVSP-CHFEI----PGLWRRYLGVILDGMRPLEASPLTPAAPSFDEFEAALA 102
            +EAVG  +F +   RE  +R+   +  LLRRAQ+AG+VR DL P D+ FL+ A G  +  C  ++    P LWRRYL V+LDG+RP  A PL    P+ ++  AA A
Sbjct:   95 LEAVGPALFSTESFRERNVRMLERLGQLLRRAQDAGQVRPDLTPEDLPFLVAAVGGATEKCPMQVDGCAPDLWRRYLCVVLDGLRPEGAHPLPGVPPTVEQLMAAKA 201          
BLAST of mRNA_P-wetherbeei_contig56370.1.1 vs. uniprot
Match: UPI0003B38A0B (TetR/AcrR family transcriptional regulator n=1 Tax=Patulibacter americanus TaxID=588672 RepID=UPI0003B38A0B)

HSP 1 Score: 79.7 bits (195), Expect = 4.570e-16
Identity = 44/104 (42.31%), Postives = 60/104 (57.69%), Query Frame = 0
Query:    1 MEAVGSEIFGSARLREARLRVAAPMEGLLRRAQEAGRVRRDLEPLDVFFLITAAGHVSP-CHFEI----PGLWRRYLGVILDGMRPLEASPLTPAAPSFDEFEA 99
            +++VG ++F   R RE   R+   +  LL R Q AG+VR DL P D+ F++ A G  +  C   +    P LWRRYLGV+LDGMRP  A PL    P+ D+  A
Sbjct:  112 LQSVGPDLFSQPRFRERNERIMGQLGELLERGQRAGQVRDDLSPEDLPFILAAVGGATEQCPVAMTGCSPDLWRRYLGVLLDGMRPAAAHPLPTGPPTLDQLMA 215          
BLAST of mRNA_P-wetherbeei_contig56370.1.1 vs. uniprot
Match: A0A810L4I5_9ACTN (TetR family transcriptional regulator n=1 Tax=Actinocatenispora sera TaxID=390989 RepID=A0A810L4I5_9ACTN)

HSP 1 Score: 75.1 bits (183), Expect = 1.890e-14
Identity = 46/103 (44.66%), Postives = 59/103 (57.28%), Query Frame = 0
Query:    2 EAVGSEIFGSARLREARLRVAAPMEGLLRRAQEAGRVRRDLEPLDVFFLITAAGHVS-PCHFEIPGLWRRYLGVILDGMRPLEASPLTPAAPSFDEFEAALAG 103
            EA  S +    R+R A  R+A   E L RRA++AG +R D+   DV  L  AA   + P    +PGLWRRYL +I DG+RP  A  L  AAP+  +F AA AG
Sbjct:  102 EAATSIVRTDTRVRAASARLAETAEELTRRARDAGAIRTDVTGHDVVLLFNAAAQAAAPLGAAVPGLWRRYLYLIFDGLRPESARTLPVAAPTAADFTAAAAG 204          
BLAST of mRNA_P-wetherbeei_contig56370.1.1 vs. uniprot
Match: A0A7K0PKZ9_9ACTN (TetR family transcriptional regulator n=2 Tax=root TaxID=1 RepID=A0A7K0PKZ9_9ACTN)

HSP 1 Score: 73.2 bits (178), Expect = 1.500e-13
Identity = 46/103 (44.66%), Postives = 59/103 (57.28%), Query Frame = 0
Query:    1 MEAVGSEIFGSARLREARLRVAAPMEGLLRRAQEAGRVRRDLEPLDVFFLITAAGHVS-PCHFE---IPGLWRRYLGVILDGMRPLEASPLTPAAPSFDEFEA 99
            +E+VG E+F    L+       A +  +L RAQ  G VR DL   DV FLI+A G  +  C       P LWRRYLG++LDGMRP  ASPL   AP+F++  A
Sbjct:  121 LESVGPELFQEPTLQRRNAERMASLSVVLERAQADGLVRDDLRAEDVPFLISAVGGATGKCSRGGAIDPELWRRYLGIVLDGMRPAGASPLPVDAPTFEQLTA 223          
BLAST of mRNA_P-wetherbeei_contig56370.1.1 vs. uniprot
Match: H0E431_9ACTN (Transcriptional regulator TetR family n=1 Tax=Patulibacter medicamentivorans TaxID=1097667 RepID=H0E431_9ACTN)

HSP 1 Score: 71.6 bits (174), Expect = 5.440e-13
Identity = 44/103 (42.72%), Postives = 63/103 (61.17%), Query Frame = 0
Query:    1 MEAVGSEIFGSARLREARLRVAAPMEGLLRRAQEAGRVRRDLEPLDVFFLITAAGHVS-PCHF--EI-PGLWRRYLGVILDGMRPLEASPLTPAAPSFDEFEA 99
            +++VG E+F    L+         +  L+ RAQ AG +R DL   DV FL++A G  +  C    EI P LWRRYLG++LDG+RP+ A+PL  AAP+F++  A
Sbjct:  117 LDSVGPELFREPSLQRRNQERMEHIRQLVARAQAAGLLRDDLRAEDVPFLLSAVGGATGQCTSGGEISPELWRRYLGIVLDGLRPVAATPLPVAAPTFEQLTA 219          
BLAST of mRNA_P-wetherbeei_contig56370.1.1 vs. uniprot
Match: A0A380P5Z2_STRGR (TetR family transcriptional regulator n=8 Tax=Streptomyces TaxID=1883 RepID=A0A380P5Z2_STRGR)

HSP 1 Score: 70.9 bits (172), Expect = 1.050e-12
Identity = 37/87 (42.53%), Postives = 52/87 (59.77%), Query Frame = 0
Query:   14 LREARLRVAAPMEGLLRRAQEAGRVRRDLEPLDVFFLITAAGHVS-PCHFEIPGLWRRYLGVILDGMRPLEASP-LTPAAPSFDEFE 98
            +RE   R+   +EGLL+RAQ  G VR D+ P+DV  L+      + P    +P LWRRYLG++ DG+ P    P L P APS +++E
Sbjct:  121 VREVEKRLIDAVEGLLKRAQRQGVVRADITPVDVLLLLGGVRQAAAPLSTAVPDLWRRYLGLVFDGLAPTRDEPSLAPPAPSREQYE 207          
BLAST of mRNA_P-wetherbeei_contig56370.1.1 vs. uniprot
Match: UPI0003765A7F (TetR/AcrR family transcriptional regulator n=1 Tax=Actinoplanes globisporus TaxID=113565 RepID=UPI0003765A7F)

HSP 1 Score: 70.1 bits (170), Expect = 1.310e-12
Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 0
Query:   13 RLREARLRVAAPMEGLLRRAQEAGRVRRDLEPLDVFFLITAAGHV-SPCHFEIPGLWRRYLGVILDGMRPLEASPLTPAAPSFD 95
            RLR+AR R+   + GL+ RAQ AG +R D+  LDV  ++    HV S      P LWRRYL +++DG+RP  A PL+P AP  D
Sbjct:  114 RLRDARERLFGAIVGLVSRAQGAGAIRADITGLDVILMMCVPAHVVSFVPDAPPDLWRRYLALVVDGLRPEGAHPLSPPAPGTD 197          
BLAST of mRNA_P-wetherbeei_contig56370.1.1 vs. uniprot
Match: UPI001AFEBC36 (TetR/AcrR family transcriptional regulator n=1 Tax=Solirubrobacteraceae bacterium TaxID=2586742 RepID=UPI001AFEBC36)

HSP 1 Score: 67.4 bits (163), Expect = 2.130e-11
Identity = 42/105 (40.00%), Postives = 57/105 (54.29%), Query Frame = 0
Query:    1 MEAVGSEIFGSARLREARLRVAAPMEGLLRRAQEAGRVRRDLEPLDVFFLITAAGHVSPCHFEI------PGLWRRYLGVILDGMRPLEASPLTPAAPSFDEFEA 99
            + +VG E+F    L++   R+   M GLL RA+ AG VR DL   D+ FLI+A G  +            P LWRRYLG +LDG+RP  A PL    P+  + +A
Sbjct:  112 LASVGPELFAVESLQQRNERMMVRMSGLLDRAKAAGVVRDDLAAEDLPFLISAIGGATQSCAPASVVGTSPDLWRRYLGFVLDGLRPQGAHPLPQPPPTLAQMKA 216          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56370.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001C3E7A0B3.380e-3365.00TetR/AcrR family transcriptional regulator n=1 Tax... [more]
UPI001C3D12B61.000e-2963.00TetR/AcrR family transcriptional regulator n=1 Tax... [more]
UPI001FEE4EB42.110e-1643.93TetR/AcrR family transcriptional regulator n=1 Tax... [more]
UPI0003B38A0B4.570e-1642.31TetR/AcrR family transcriptional regulator n=1 Tax... [more]
A0A810L4I5_9ACTN1.890e-1444.66TetR family transcriptional regulator n=1 Tax=Acti... [more]
A0A7K0PKZ9_9ACTN1.500e-1344.66TetR family transcriptional regulator n=2 Tax=root... [more]
H0E431_9ACTN5.440e-1342.72Transcriptional regulator TetR family n=1 Tax=Patu... [more]
A0A380P5Z2_STRGR1.050e-1242.53TetR family transcriptional regulator n=8 Tax=Stre... [more]
UPI0003765A7F1.310e-1246.43TetR/AcrR family transcriptional regulator n=1 Tax... [more]
UPI001AFEBC362.130e-1140.00TetR/AcrR family transcriptional regulator n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.357.10Tetracycline Repressor, domain 2coord: 1..87
e-value: 2.8E-11
score: 46.2
IPR036271Tetracyclin repressor-like, C-terminal domain superfamilySUPERFAMILY48498Tetracyclin repressor-like, C-terminal domaincoord: 11..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56370contigP-wetherbeei_contig56370:20..328 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56370.1.1mRNA_P-wetherbeei_contig56370.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig56370 2..328 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig56370.1.1 ID=prot_P-wetherbeei_contig56370.1.1|Name=mRNA_P-wetherbeei_contig56370.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=103bp
MEAVGSEIFGSARLREARLRVAAPMEGLLRRAQEAGRVRRDLEPLDVFFL
ITAAGHVSPCHFEIPGLWRRYLGVILDGMRPLEASPLTPAAPSFDEFEAA
LAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036271Tet_transcr_reg_TetR-rel_C_sf