mRNA_P-wetherbeei_contig5629.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5629.4.1
Unique NamemRNA_P-wetherbeei_contig5629.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5629.4.1 vs. uniprot
Match: A0A835ZD03_9STRA (DnaJ subfamily B protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD03_9STRA)

HSP 1 Score: 187 bits (475), Expect = 5.590e-53
Identity = 129/290 (44.48%), Postives = 148/290 (51.03%), Query Frame = 1
Query:   85 ANRDEAERCKEIAKDHLRKGKYDSAAKFFDKSLRLFPLPGVEGMRDRALRESEAAKARAAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGARPNGRANGAPDEPDAGAGSRRQSVNGAGTSGNGVGEHSGSGRPYTEAQMAEVKTVLDASKKG-HYEVLGVPHDVGEEELKKSYRKLALKFHPDKNGAPHADEAFKAIGTAFAVLSDPQKRAAYDKYGDED---GPQGTAATQHSHFRRRHREDVSPEDIFNMFFGIPPNA--RGGPGFRVYRAG 936
            ANRDEAE+C EI K  LR   YD A KFFDKSLRLF LPG EG+R RA    E A+A+A                                            NG+          DEP      RR              E  GSGRPYT+AQ+   + VL     G HYEVL +     ++++K+SYRKLALKFHPDKNGAPHA EAFKAIG AFAVLSDP KRAAYD+YGD++   G  G     H  +      +VSPEDIFNMFFG       R G GFR Y  G
Sbjct:    5 ANRDEAEKCLEIGKKALRIHDYDKAIKFFDKSLRLFRLPGAEGLRARAAENKEKAEAKA--------------------------------------------NGS--------TQDEP------RRAQ------------ERRGSGRPYTDAQVTACEDVLKRKHHGGHYEVLCIEKTATDDDIKRSYRKLALKFHPDKNGAPHAPEAFKAIGHAFAVLSDPDKRAAYDRYGDDEPANGLNGGGGGMHGGWANGRGAEVSPEDIFNMFFGQMAGGGMRAG-GFRTYHGG 223          
BLAST of mRNA_P-wetherbeei_contig5629.4.1 vs. uniprot
Match: A0A4D9D2B9_9STRA (J domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2B9_9STRA)

HSP 1 Score: 176 bits (445), Expect = 3.420e-48
Identity = 138/285 (48.42%), Postives = 168/285 (58.95%), Query Frame = 1
Query:   82 EANRDEAERCKEIAKDHLRKGKYDSAAKFFDKSLRLFPLPGVEGMRDRALRESEAAKARAAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGARPNGRANGAPDEPDAGAGSRRQSVNGAGTSGNGVGEHSGSGRPYTEAQMAEVKTVLDASKKGHYEVLGVPHDVGEEELKKSYRKLALKFHPDKNGAPHADEAFKAIGTAFAVLSDPQKRAAYDKYGDEDGPQGTAATQHSHFRRRHREDVSPEDIFNMFFGIPPNARGGPG-FRVYRA 933
            E N+DEAERC E+ +  LR G Y  A KF DKSL+L+PL GVE ++ RA  E E +    ++  XXXXXXXXXXXX     XXXXXXXXXXXXXX                                              G++   GR Y+E Q+   +T++ + KKGHYEVL V     ++++KKSYRKLALKFHPDKN AP ADEAFKAI TAF VLSDP KR +YD++GD+DG +G     H  FR     DVSPE+IFNMFFG+  N  G P  FRVYR+
Sbjct:    2 EMNKDEAERCLELGRKFLRDGSYAKAIKFLDKSLKLYPLAGVEALKARAESEWERSTGSTSRNGXXXXXXXXXXXXGQLPRXXXXXXXXXXXXXXSK-------------------------------------------AGQN---GRSYSEEQVVACRTIIQSKKKGHYEVLSVSRTATDDQIKKSYRKLALKFHPDKNAAPQADEAFKAISTAFQVLSDPDKRRSYDQFGDDDGTEGMGGQAHP-FRHA---DVSPEEIFNMFFGV--NGGGRPANFRVYRS 234          
BLAST of mRNA_P-wetherbeei_contig5629.4.1 vs. uniprot
Match: D8LBV6_ECTSI (Heat shock protein 40 like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBV6_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 4.380e-48
Identity = 158/301 (52.49%), Postives = 187/301 (62.13%), Query Frame = 1
Query:   70 LSMSEANRDEAERCKEIAKDHLRKGKYDSAAKFFDKSLRLFPLPGVEGMRDRALRESEAAKARAAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGARPNGRANGAPDEPDAGAGSRRQSVNGAGTSGNGVGEHSGSGRPYTEAQMAEVKTVLDASKKGHYEVLGVPHDVGEEELKKSYRKLALKFHPDKNGAPHADEAFKAIGTAFAVLSDPQKRAAYDKYGDEDGPQGTAATQHSH-FRRRHR--EDVSPEDIFNMFFGIPPNAR------GGPGF--RVYRAGG 939
            ++ S AN+DEAE+C+++A   L++G++  A +FF+KSLRL+PLPGVE + D A R            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                           GR +T  Q   VK VL++  KGHY+VLG+     ++++KK+YRKLAL+ HPDKNGAP A EAF+AIGTAFAVLSD  KRA YD+YGD DGPQG    Q    F R H    +VSPEDIFNMFFG PP AR      G P F  RVYRAGG
Sbjct:    1 MAGSLANKDEAEKCRDLAAKFLQQGEHGKAVRFFEKSLRLYPLPGVESLLDLAKRRQAGPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------GRAFTPEQERMVKQVLNSKAKGHYDVLGIEKGANDDQIKKAYRKLALRLHPDKNGAPQAHEAFQAIGTAFAVLSDADKRAHYDRYGDGDGPQGIGGGQGGGPFGRGHHYGAEVSPEDIFNMFFGQPPGARRRQGRGGMPSFNTRVYRAGG 266          
BLAST of mRNA_P-wetherbeei_contig5629.4.1 vs. uniprot
Match: A0A7S2UNV9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UNV9_9STRA)

HSP 1 Score: 174 bits (442), Expect = 2.260e-47
Identity = 135/302 (44.70%), Postives = 161/302 (53.31%), Query Frame = 1
Query:   82 EANRDEAERCKEIAKDHLRKGKYDSAAKFFDKSLRLFPLPGVEGMRDRALRESEAAKARAAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGARPNGRANGAPDEPDAGAGSRRQSVNGAGTSGNGVGEHSGSGRPYTEAQMAEVKTVLDASKKG----HYEVLGVPHDVGEEELKKSYRKLALKFHPDKNGAPHADEAFKAIGTAFAVLSDPQKRAAYDKYGDEDGPQGTAATQHS---------HFRRRHREDVSPEDIFNMFFG----IPPNARGGPGFRVYRAG 936
            E N+ EAE+C++I  + LRKG+ D A KF  KSLRL+PLPGV+ +    L ++E  K  A+          XXXXXXXXXXXX                                    P A    +  + + A TS NG G ++G GRPY+  Q   +KTVLDA KKG    HY VLGV     E ELKK+YRKLALK HPDKN AP ADEAFKA+G A+  LSDPQKR  YD+YGDED                    HFR    ++V+PEDIFNMFFG          GGPGFRVY  G
Sbjct:    2 EVNKGEAEKCRDIGGEALRKGELDRAVKFLGKSLRLYPLPGVKAL----LSQAERRKTEASSSTGTPASNKXXXXXXXXXXXXSAA---------------------------------PRASVRRQESTASAASTSSNG-GTNAG-GRPYSGVQTDIIKTVLDAQKKGGRGTHYRVLGVASSASESELKKAYRKLALKLHPDKNSAPLADEAFKAVGMAYGTLSDPQKRTIYDRYGDEDPDTSGXXXXXXXXXXXXXGVHFRPG--QEVNPEDIFNMFFGGXXXXXXXXXGGPGFRVYTNG 262          
BLAST of mRNA_P-wetherbeei_contig5629.4.1 vs. uniprot
Match: A0A2P4YST8_9STRA (DnaJ subfamily B protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YST8_9STRA)

HSP 1 Score: 169 bits (429), Expect = 4.090e-47
Identity = 112/270 (41.48%), Postives = 139/270 (51.48%), Query Frame = 1
Query:   82 EANRDEAERCKEIAKDHLRKGKYDSAAKFFDKSLRLFPLPGVEGMRDRALRESEAAKARAAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGARPNGRANGAPDEPDAGAGSRRQSVNGAGTSGNGVGEHSGSGRPYTEAQMAEVKTVLDASKKGHYEVLGVPHDVGEEELKKSYRKLALKFHPDKNGAPHADEAFKAIGTAFAVLSDPQKRAAYDKYGDEDGPQGTAATQHSHFRRRH--REDVSPEDIFNMFFG 885
            E N+ EAE+C EI K HLR G ++ A KFFDKS R++PLPGVE MRDRA  E E A   +AQ                                              P G +        + AG R ++   A +        S   RPYT  Q+  V+ +     K HYEVL V     E E+KK+YRKLALK HPDKN AP A++AFKA+G AFA+LSDP KRA YD+YGD+      A  Q  H  RR+   ED++PE+IFNMFFG
Sbjct:    2 EMNKGEAEKCLEIGKKHLRLGNWEKAIKFFDKSHRMYPLPGVEAMRDRAKVEMEKASTPSAQS-------------------------------------------TSPRGAS--------SSAGMRHRAAPAAPSRS----PSSEPSRPYTAEQLQMVRKIKAC--KNHYEVLAVQQAATENEIKKAYRKLALKLHPDKNSAPGAEDAFKAVGKAFAILSDPDKRAHYDRYGDD------APVQQQHHGRRYAQEEDITPEEIFNMFFG 208          
BLAST of mRNA_P-wetherbeei_contig5629.4.1 vs. uniprot
Match: K3WHQ5_GLOUD (J domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHQ5_GLOUD)

HSP 1 Score: 171 bits (433), Expect = 1.350e-46
Identity = 112/272 (41.18%), Postives = 139/272 (51.10%), Query Frame = 1
Query:   82 EANRDEAERCKEIAKDHLRKGKYDSAAKFFDKSLRLFPLPGVEGMRDRALRESEAAKARAAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGARPNGRANGAPDEPDAGAGSRRQSV----NGAGTSGNGVGEHSGSGRPYTEAQMAEVKTVLDASKKGHYEVLGVPHDVGEEELKKSYRKLALKFHPDKNGAPHADEAFKAIGTAFAVLSDPQKRAAYDKYGDEDGPQGTAATQHSHFRRRHREDVSPEDIFNMFFG 885
            E N+ EAE+C++I K +LR G Y  AAKFF+KS R++PLPGVE MR+RAL E + A+  A+                                                       P  P   +G     V    N A TSG+       S RPYT  Q+  V  +     K HYEVL VP    + E+KK+YRKLALK HPDKN AP A++AFKA+G AF VLSDP KRA YD+YGD    +   AT H   RR   ++VSPE+IFNMFFG
Sbjct:    2 EMNKSEAEKCRDIGKKYLRAGNYRQAAKFFEKSHRMYPLPGVEMMRERALEELKKAEEAASSS----------------------------------------------------TPTSPRHASGHGHHGVRRRENAAPTSGSAA-RADDSARPYTAEQVQIVNKIRAC--KNHYEVLAVPQVADDNEIKKAYRKLALKLHPDKNSAPGAEDAFKAVGKAFTVLSDPDKRAHYDRYGD----RAPEATSHRQQRRYQNDEVSPEEIFNMFFG 214          
BLAST of mRNA_P-wetherbeei_contig5629.4.1 vs. uniprot
Match: A0A6H5JQ06_9PHAE (HSP40 like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ06_9PHAE)

HSP 1 Score: 171 bits (432), Expect = 8.130e-46
Identity = 151/298 (50.67%), Postives = 179/298 (60.07%), Query Frame = 1
Query:   79 SEANRDEAERCKEIAKDHLRKGKYDSAAKFFDKSLRLFPLPGVEGMRDRALRESEAAKARAAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGARPNGRANGAPDEPDAGAGSRRQSVNGAGTSGNGVGEHSGSGRPYTEAQMAEVKTVLDASKKGHYEVLGVPHDVGEEELKKSYRKLALKFHPDKNGAPHADEAFKAIGTAFAVLSDPQKRAAYDKYGDEDGPQGTAATQHSH-FRRRHR--EDVSPEDIFNMFFGIPPNAR------GGPGF--RVYRAGG 939
            S AN+DEAE+C+++A   L++G++  A +FF+KSLRL+PLPGVE + D A  + E +       XXXXXXXXXXXXXXXXXXXXXXXX         XXXXXXXX                                           GR +T  Q   VK VL + KKGHY+VLGV     ++++KK+YRKLAL+ HPDKNGAP A EAF+AIGTAFAVLSD  KRA YD+YGD+DGPQG    Q    F R H    +VSPEDIFNMFFG PP AR      G P F  RVYRAGG
Sbjct:    4 SLANKDEAEKCRDLAAKFLQQGEHGKAVRFFEKSLRLYPLPGVESLLDLAKSKQEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPFSSANGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXGRAFTPEQERMVKQVLTSKKKGHYDVLGVEKGANDDQIKKAYRKLALRLHPDKNGAPQAHEAFQAIGTAFAVLSDGDKRAHYDRYGDDDGPQGIGGGQGGGPFGRGHHYGAEVSPEDIFNMFFGQPPGARRRQGRGGMPSFNTRVYRAGG 297          
BLAST of mRNA_P-wetherbeei_contig5629.4.1 vs. uniprot
Match: A0A833SRF8_PHYIN (J domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A833SRF8_PHYIN)

HSP 1 Score: 164 bits (415), Expect = 4.720e-44
Identity = 111/268 (41.42%), Postives = 136/268 (50.75%), Query Frame = 1
Query:   82 EANRDEAERCKEIAKDHLRKGKYDSAAKFFDKSLRLFPLPGVEGMRDRALRESEAAKARAAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGARPNGRANGAPDEPDAGAGSRRQSVNGAGTSGNGVGEHSGSGRPYTEAQMAEVKTVLDASKKGHYEVLGVPHDVGEEELKKSYRKLALKFHPDKNGAPHADEAFKAIGTAFAVLSDPQKRAAYDKYGDEDGPQGTAATQHSHFRRRHREDVSPEDIFNMFFG 885
            E N+ EAE+C EI K HLR G +D A KFF+KS R++PLPGVE MRDRA  E E     +AQ                                           GA P+             AG R ++   A +        S   RPYT  Q+  V+ +     K HYEVL V     E E+KK+YRKLALK HPDKN AP A++AFKA+G AFAVLSDP KRA YD+YGD D P      Q   + +   ED++PE+IFNMFFG
Sbjct:    2 EMNKGEAEKCLEIGKKHLRLGNWDKAIKFFEKSHRMYPLPGVEAMRDRAKAEMEKEATPSAQPTSP--------------------------------------RGAAPSS------------AGMRHRTAPAAPSRS----PSSEPSRPYTADQLQMVRKIKAC--KNHYEVLAVQQTATENEVKKAYRKLALKLHPDKNSAPGAEDAFKAVGKAFAVLSDPDKRAHYDRYGD-DAPVQQQQPQGRRYAQE--EDITPEEIFNMFFG 210          
BLAST of mRNA_P-wetherbeei_contig5629.4.1 vs. uniprot
Match: A0A662XD70_9STRA (J domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XD70_9STRA)

HSP 1 Score: 171 bits (434), Expect = 5.040e-44
Identity = 109/268 (40.67%), Postives = 135/268 (50.37%), Query Frame = 1
Query:   82 EANRDEAERCKEIAKDHLRKGKYDSAAKFFDKSLRLFPLPGVEGMRDRALRESEAAKARAAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGARPNGRANGAPDEPDAGAGSRRQSVNGAGTSGNGVGEHSGSGRPYTEAQMAEVKTVLDASKKGHYEVLGVPHDVGEEELKKSYRKLALKFHPDKNGAPHADEAFKAIGTAFAVLSDPQKRAAYDKYGDEDGPQGTAATQHSHFRRRHREDVSPEDIFNMFFG 885
            E N+ EAE+C+EI K HLR G +  A KFFDKS R+FPLPGVE MRDRA  E + A A   Q+                                                        P AGAG R ++   A  S           RPYT  Q+  V+ +     K HYEVL V     + E+KK+YRKLALK HPDKN AP A++AFKA+G AFAVLSD +KRA YD+YGD+   QGT   +         +D++PE+IFNMFFG
Sbjct:    2 EMNKGEAEKCREIGKKHLRLGNFAQAVKFFDKSHRMFPLPGVEAMRDRAQEELDKASAPRGQQT------------------------------------------------------SPRAGAGVRHRAAPAASPSPPSRSPSEEPSRPYTADQLTMVRKIRAC--KTHYEVLAVTQTATDNEVKKAYRKLALKLHPDKNSAPGAEDAFKAVGKAFAVLSDSEKRAHYDRYGDDAPVQGTQGGRGRRGYNPQEDDITPEEIFNMFFG 213          
BLAST of mRNA_P-wetherbeei_contig5629.4.1 vs. uniprot
Match: A0A8K1FDU3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDU3_PYTOL)

HSP 1 Score: 163 bits (413), Expect = 9.710e-44
Identity = 108/268 (40.30%), Postives = 141/268 (52.61%), Query Frame = 1
Query:   82 EANRDEAERCKEIAKDHLRKGKYDSAAKFFDKSLRLFPLPGVEGMRDRALRESEAAKARAAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGARPNGRANGAPDEPDAGAGSRRQSVNGAGTSGNGVGEHSGSGRPYTEAQMAEVKTVLDASKKGHYEVLGVPHDVGEEELKKSYRKLALKFHPDKNGAPHADEAFKAIGTAFAVLSDPQKRAAYDKYGDEDGPQGTAATQHSHFRRRHREDVSPEDIFNMFFG 885
            E N+ EAE+C++IAK  LR+GKY  A KFF+KS R++PLPGVE M DRA  + E AK +                                              GA  +   + +   P  GAG RR+    +  S + V       RPYT  Q+  V  +     K HYEVLGV  D  + E+KK+YRKLALK HPDKN AP A++AFKA+G AF +LSD +KRA YD++GD D       T  +  RR   +D+SP++IFNMFFG
Sbjct:    2 EMNKGEAEKCRDIAKRFLREGKYAQAIKFFEKSHRMYPLPGVEAMCDRA--KVELAKEQG---------------------------------------------GASTSSSGHASSTHPADGAGVRRRETASSSASEDPV-------RPYTSDQVHIVNKIRAC--KTHYEVLGVTKDADDNEIKKAYRKLALKLHPDKNSAPGAEDAFKAVGKAFTILSDTEKRAHYDRFGDRD----PNTTPQARGRRYQEDDISPDEIFNMFFG 209          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5629.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZD03_9STRA5.590e-5344.48DnaJ subfamily B protein n=1 Tax=Tribonema minus T... [more]
A0A4D9D2B9_9STRA3.420e-4848.42J domain-containing protein n=2 Tax=Monodopsidacea... [more]
D8LBV6_ECTSI4.380e-4852.49Heat shock protein 40 like protein n=1 Tax=Ectocar... [more]
A0A7S2UNV9_9STRA2.260e-4744.70Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A2P4YST8_9STRA4.090e-4741.48DnaJ subfamily B protein n=1 Tax=Phytophthora palm... [more]
K3WHQ5_GLOUD1.350e-4641.18J domain-containing protein n=1 Tax=Globisporangiu... [more]
A0A6H5JQ06_9PHAE8.130e-4650.67HSP40 like protein n=1 Tax=Ectocarpus sp. CCAP 131... [more]
A0A833SRF8_PHYIN4.720e-4441.42J domain-containing protein n=3 Tax=Phytophthora T... [more]
A0A662XD70_9STRA5.040e-4440.67J domain-containing protein n=1 Tax=Nothophytophth... [more]
A0A8K1FDU3_PYTOL9.710e-4440.30Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5629contigP-wetherbeei_contig5629:1530..3764 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LBV6
PFAMsDUF1977,DnaJ,SRAP
Model size995
Max annot lvl2759|Eukaryota
KEGG koko:K09518
KEGG Pathwayko04141,map04141
Hectar predicted targeting categoryother localisation
Exons4
Evalue7.18e-49
EggNOG OGsCOG0484@1|root,KOG0714@2759|Eukaryota
Descriptionprotein folding
Cds size993
COG categoryO
BRITEko00000,ko00001,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186837.3241715-CDS-P-wetherbeei_contig5629:1529..21261683186837.3241715-CDS-P-wetherbeei_contig5629:1529..2126Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5629 1530..2126 +
1683186837.3392637-CDS-P-wetherbeei_contig5629:2635..27531683186837.3392637-CDS-P-wetherbeei_contig5629:2635..2753Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5629 2636..2753 +
1683186837.351083-CDS-P-wetherbeei_contig5629:3131..32141683186837.351083-CDS-P-wetherbeei_contig5629:3131..3214Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5629 3132..3214 +
1683186837.3602185-CDS-P-wetherbeei_contig5629:3569..37641683186837.3602185-CDS-P-wetherbeei_contig5629:3569..3764Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5629 3570..3764 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5629.4.1prot_P-wetherbeei_contig5629.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5629 1530..3764 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5629.4.1

>prot_P-wetherbeei_contig5629.4.1 ID=prot_P-wetherbeei_contig5629.4.1|Name=mRNA_P-wetherbeei_contig5629.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=331bp
CCLYTRQGISSAFGALSWCWDCILSMSEANRDEAERCKEIAKDHLRKGKY
DSAAKFFDKSLRLFPLPGVEGMRDRALRESEAAKARAAQKAENGSSAGAN
GRGSANGAGSGGGGSFGSGSYGGGGGASSGGNGARPNGRANGAPDEPDAG
AGSRRQSVNGAGTSGNGVGEHSGSGRPYTEAQMAEVKTVLDASKKGHYEV
LGVPHDVGEEELKKSYRKLALKFHPDKNGAPHADEAFKAIGTAFAVLSDP
QKRAAYDKYGDEDGPQGTAATQHSHFRRRHREDVSPEDIFNMFFGIPPNA
RGGPGFRVYRAGGAARPAAGGGGQQQQQQG*
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mRNA from alignment at P-wetherbeei_contig5629:1530..3764+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5629.4.1 ID=mRNA_P-wetherbeei_contig5629.4.1|Name=mRNA_P-wetherbeei_contig5629.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2235bp|location=Sequence derived from alignment at P-wetherbeei_contig5629:1530..3764+ (Phaeothamnion wetherbeei SAG_119_79)
TGCTGCTTATATACCCGACAGGGAATAAGCAGCGCTTTTGGCGCGCTCTC GTGGTGTTGGGACTGTATTTTGTCGATGTCAGAAGCTAACAGAGATGAAG CGGAGCGCTGTAAGGAGATTGCGAAAGACCATCTGCGAAAAGGGAAGTAT GATTCTGCGGCAAAATTCTTCGACAAGTCGCTGCGTCTCTTCCCTCTGCC CGGCGTCGAGGGCATGAGGGATCGGGCCCTCCGAGAGAGTGAGGCGGCCA AAGCTCGCGCGGCGCAAAAAGCAGAGAATGGCAGCAGCGCCGGGGCGAAC GGAAGGGGAAGCGCGAACGGGGCAGGGAGCGGCGGCGGCGGCAGCTTCGG CAGCGGCAGTTATGGCGGCGGTGGCGGCGCGAGCAGCGGGGGCAACGGAG CCAGACCAAACGGAAGGGCGAACGGGGCGCCCGACGAACCCGACGCCGGT GCAGGCTCGCGGCGCCAGTCCGTCAACGGCGCCGGAACGAGCGGGAACGG CGTGGGGGAGCACTCAGGCTCGGGGCGGCCATACACAGAGGCGCAAATGG CCGAGGTGAAGACGGTTCTCGACGCGAGCAAAAAAGGTCACTACGAGGTG AGCTGCGTGGTTACTGATGCCGTGATGCCGTTTGCCTTTTTTTGCGCTGC TGCTAGGCGAGCTCCTAGAACGAGCTCCCATTAGACTATTTCATGGGGGG ATTCCATTATCTGAGACGGAAAAGGCACAGGTCGTTACGGGAAGGCCTCC ATTTGTAGGCGCGTTGGCGAATCTCTTTCTTGAAATTGCTTAGAAGGTGC TTCTGGGCAGCATACTTGACTGAAGGATGGATTTTGGTTGTGGCGGTAGC CTTTCATGAATAAGCGTATTGCCTTCTCGTCCGACTTCTGCTTACTTTAT TTGGAAAAGGTGATGGGATTACGTTGGAGAAGGTACACTTGCTTGATGGT CTTTCTTCCCACGCTTCGTGTCTTTCTTCCTGTGTAGAGACGGTTTCGAG TTTGAATCGCCCAGCGATACGATGTTCTGTCTATTGTTTCGCCGCCGGCA CCTCCCCGGAATACCCCTCACTGAATCACTGGACACCAACAAACACCAAT CCAAAGGTCCTGGGGGTGCCGCACGACGTGGGGGAGGAGGAGCTGAAGAA GTCGTACCGGAAGCTCGCCCTCAAGTTCCACCCGGACAAGAACGGGGCGC CGCACGCCGATGAGGCCTTTAAAGGTTGGTGCTGGTCTGAAAGGAGCTTG GGGGGTTTCGTGTTCGCTGTTTTAGTTCCTTGAAGGTTTTTCCTCGTAGG CCGTTTCTTTCGTTTTCGGGCCATTTCTCTCTTGCCGCTTTGTCAGGCGT TCGCTGCCTTTCCCATTGCTTTGTTCCTCACCTTCTCATGCTTCTTCGGT TGACGATGTCTCAAGCCTTTAAGGTCCATCCAGCCCATCCGCGGTGCTTT CTAACGGGATTCCTAGGCAAGCAACGACGTTTTCAACAGTTCAAATTCCT ATCTCTCTCCTCTGTTTCAATTGACTCATCATTGGCTAACGACTTGTTGC TTCCTGTTTCCCTTTTACCAAGTTCCAACCATCCCTTCGTTGCTGGGCGC AGCCATCGGGACCGCGTTCGCGGTGCTGAGCGATCCACAGAAGCGGGCGG CGTACGATAAGTACGGCGACGAGGACGGCCCACAGGTGCGGCGCCGCGCC GTGCCATGCAGGGAAAAGAGGAGCCTGCTTTTGCTGACCTTGCGTTTCTC AATGTTTCAGTTTTGCGAGCTTCGGGATTTCTTACTCGCAGATTTTACCT CCTTTCCCCGCTTTTTCTTAGAACGTGATAGAACTCTTGACTCGAAACCT CTTAGCATATATTGCTTCTCTGACCGCCGCTCTCTCTGGCGCAACCTCGC TCTGCGGACTGGGCCCGGCTCACCCCATCCTCAACCACTGCTCGCTGGCT GGCGGTCTGTGACTATGGTATGGCTGACTGTGCCGGCGGTGCTGGGCTCG GCTGGAATGCGCGTGGCTTCCGCTGGGCTGAGATATGCAGGGTACGGCGG CAACGCAGCACTCGCACTTTCGGAGGCGACACCGCGAAGACGTGTCCCCT GAGGACATCTTCAACATGTTCTTCGGCATCCCGCCTAACGCCCGCGGCGG GCCCGGCTTCCGCGTCTACCGAGCGGGCGGCGCCGCGAGGCCGGCGGCGG GAGGGGGAGGACAGCAGCAGCAGCAGCAGGGGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5629:1530..3764+

>mRNA_P-wetherbeei_contig5629.4.1 ID=mRNA_P-wetherbeei_contig5629.4.1|Name=mRNA_P-wetherbeei_contig5629.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=993bp|location=Sequence derived from alignment at P-wetherbeei_contig5629:1530..3764+ (Phaeothamnion wetherbeei SAG_119_79)
TGCTGCTTATATACCCGACAGGGAATAAGCAGCGCTTTTGGCGCGCTCTC
GTGGTGTTGGGACTGTATTTTGTCGATGTCAGAAGCTAACAGAGATGAAG
CGGAGCGCTGTAAGGAGATTGCGAAAGACCATCTGCGAAAAGGGAAGTAT
GATTCTGCGGCAAAATTCTTCGACAAGTCGCTGCGTCTCTTCCCTCTGCC
CGGCGTCGAGGGCATGAGGGATCGGGCCCTCCGAGAGAGTGAGGCGGCCA
AAGCTCGCGCGGCGCAAAAAGCAGAGAATGGCAGCAGCGCCGGGGCGAAC
GGAAGGGGAAGCGCGAACGGGGCAGGGAGCGGCGGCGGCGGCAGCTTCGG
CAGCGGCAGTTATGGCGGCGGTGGCGGCGCGAGCAGCGGGGGCAACGGAG
CCAGACCAAACGGAAGGGCGAACGGGGCGCCCGACGAACCCGACGCCGGT
GCAGGCTCGCGGCGCCAGTCCGTCAACGGCGCCGGAACGAGCGGGAACGG
CGTGGGGGAGCACTCAGGCTCGGGGCGGCCATACACAGAGGCGCAAATGG
CCGAGGTGAAGACGGTTCTCGACGCGAGCAAAAAAGGTCACTACGAGGTC
CTGGGGGTGCCGCACGACGTGGGGGAGGAGGAGCTGAAGAAGTCGTACCG
GAAGCTCGCCCTCAAGTTCCACCCGGACAAGAACGGGGCGCCGCACGCCG
ATGAGGCCTTTAAAGCCATCGGGACCGCGTTCGCGGTGCTGAGCGATCCA
CAGAAGCGGGCGGCGTACGATAAGTACGGCGACGAGGACGGCCCACAGGG
TACGGCGGCAACGCAGCACTCGCACTTTCGGAGGCGACACCGCGAAGACG
TGTCCCCTGAGGACATCTTCAACATGTTCTTCGGCATCCCGCCTAACGCC
CGCGGCGGGCCCGGCTTCCGCGTCTACCGAGCGGGCGGCGCCGCGAGGCC
GGCGGCGGGAGGGGGAGGACAGCAGCAGCAGCAGCAGGGGTGA
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