mRNA_P-wetherbeei_contig5625.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5625.1.1 vs. uniprot
Match: A0A6V1PIG5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PIG5_HETAK) HSP 1 Score: 115 bits (288), Expect = 8.310e-28 Identity = 49/70 (70.00%), Postives = 54/70 (77.14%), Query Frame = 3
Query: 273 IVRRVPGYADMHVALAAHAWGERDIPTAEQEWQLTCDRIDVGCRKYKDSNWVSTVRRWPPSLARQLDNFL 482
+ R+ PGYADMHVALAAHAW RD TAE+EW TC+ IDVGCRKYKD WVS VRRWPPSL +L FL
Sbjct: 134 VTRKNPGYADMHVALAAHAWSVRDPETAEREWAFTCNAIDVGCRKYKDLEWVSVVRRWPPSLVEELQRFL 203
BLAST of mRNA_P-wetherbeei_contig5625.1.1 vs. uniprot
Match: A0A835YV52_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV52_9STRA) HSP 1 Score: 111 bits (278), Expect = 3.460e-25 Identity = 45/74 (60.81%), Postives = 54/74 (72.97%), Query Frame = 3
Query: 270 DIVRRVPGYADMHVALAAHAWGERDIPTAEQEWQLTCDRIDVGCRKYKDSNWVSTVRRWPPSLARQLDNFLNRR 491
++RR PGYAD+HVA+AA AWG RD TAE+EW C DVGC KYK WV+ +RRWPPSL+ QL NFL +R
Sbjct: 281 SVLRRQPGYADLHVAIAADAWGRRDAETAEREWAFACQNTDVGCAKYKSMEWVTGIRRWPPSLSAQLGNFLEKR 354
BLAST of mRNA_P-wetherbeei_contig5625.1.1 vs. uniprot
Match: A0A7S0NF04_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0NF04_9CRYP) HSP 1 Score: 103 bits (256), Expect = 5.960e-23 Identity = 42/74 (56.76%), Postives = 52/74 (70.27%), Query Frame = 3
Query: 270 DIVRRVPGYADMHVALAAHAWGERDIPTAEQEWQLTCDRIDVGCRKYKDSNWVSTVRRWPPSLARQLDNFLNRR 491
DIVRR PGY DMHVALAA AW D TAE EW+ C++I GC Y+D +W+STVRRWPPS+ + FL ++
Sbjct: 165 DIVRRNPGYTDMHVALAAIAWSAGDRETAESEWEFACNKIQTGCSLYRDMDWLSTVRRWPPSMVANMKQFLGKK 238
BLAST of mRNA_P-wetherbeei_contig5625.1.1 vs. uniprot
Match: A0A0G4ECF0_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ECF0_VITBC) HSP 1 Score: 104 bits (260), Expect = 1.920e-22 Identity = 43/72 (59.72%), Postives = 53/72 (73.61%), Query Frame = 3
Query: 270 DIVRRVPGYADMHVALAAHAWGERDIPTAEQEWQLTCDRIDVGCRKYKDSNWVSTVRRWPPSLARQLDNFLN 485
IVRR P Y DMHVALAAHA+ E D+P A +EWQ C RI+ GCR+Y +WVS +RRWPPSL +L +F+N
Sbjct: 301 QIVRRQPAYTDMHVALAAHAYSENDLPGALKEWQFACTRIESGCRRYTQLDWVSEIRRWPPSLVSELRSFIN 372
BLAST of mRNA_P-wetherbeei_contig5625.1.1 vs. uniprot
Match: A0A4D9DA78_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DA78_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.060e-20 Identity = 37/71 (52.11%), Postives = 54/71 (76.06%), Query Frame = 3
Query: 270 DIVRRVPGYADMHVALAAHAWGERDIPTAEQEWQLTCDRIDVGCRKYKDSNWVSTVRRWPPSLARQLDNFL 482
D++RR PG+ D+HVALAAHAWGE ++ AE+EW+ C++ GC Y+D ++V +RRWPPSL ++L+ FL
Sbjct: 237 DVLRRQPGFVDVHVALAAHAWGEGNLGRAEKEWRFACEQTTTGCASYRDLDFVQRIRRWPPSLVKKLEGFL 307
BLAST of mRNA_P-wetherbeei_contig5625.1.1 vs. uniprot
Match: W7UAX4_9STRA (Tpr-repeat protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UAX4_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 3.350e-20 Identity = 37/71 (52.11%), Postives = 54/71 (76.06%), Query Frame = 3
Query: 270 DIVRRVPGYADMHVALAAHAWGERDIPTAEQEWQLTCDRIDVGCRKYKDSNWVSTVRRWPPSLARQLDNFL 482
D++RR PG+ D+HVALAAHAWGE ++ AE+EW+ C++ GC Y+D ++V +RRWPPSL ++L+ FL
Sbjct: 340 DVLRRQPGFVDVHVALAAHAWGEGNLGRAEKEWRFACEQTTTGCASYRDLDFVQRIRRWPPSLVKKLEGFL 410
BLAST of mRNA_P-wetherbeei_contig5625.1.1 vs. uniprot
Match: A0A0D2J898_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2J898_9CHLO) HSP 1 Score: 93.6 bits (231), Expect = 1.490e-18 Identity = 41/71 (57.75%), Postives = 49/71 (69.01%), Query Frame = 3
Query: 273 IVRRVPGYADMHVALAAHAWGERDIPTAEQEWQLTCDRIDVGCRKYKDSNWVSTVRRWPPSLARQLDNFLN 485
I RR PG ADM VALAA W AE++WQ CDRI VGCRKY D++W+S VRRWPPS+ L +FL+
Sbjct: 279 IARRAPGSADMRVALAALLWQRGLDADAEEQWQYACDRITVGCRKYTDADWLSRVRRWPPSMVAALSDFLS 349
BLAST of mRNA_P-wetherbeei_contig5625.1.1 vs. uniprot
Match: A0A7S1N6Y8_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1N6Y8_9EUGL) HSP 1 Score: 92.4 bits (228), Expect = 1.650e-18 Identity = 37/70 (52.86%), Postives = 50/70 (71.43%), Query Frame = 3
Query: 270 DIVRRVPGYADMHVALAAHAWGERDIPTAEQEWQLTCDRIDVGCRKYKDSNWVSTVRRWPPSLARQLDNF 479
IV+RVPG+ DMHVALA A+ + D+ TAE EW + C+RI GC KY+D +WV +RRWPPSL ++ +
Sbjct: 206 SIVKRVPGFTDMHVALAMIAYHKGDLATAETEWDIACNRISSGCSKYRDIDWVRRIRRWPPSLVAIMEQY 275
BLAST of mRNA_P-wetherbeei_contig5625.1.1 vs. uniprot
Match: A0A2V0PLF6_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PLF6_9CHLO) HSP 1 Score: 93.2 bits (230), Expect = 2.490e-18 Identity = 39/70 (55.71%), Postives = 47/70 (67.14%), Query Frame = 3
Query: 273 IVRRVPGYADMHVALAAHAWGERDIPTAEQEWQLTCDRIDVGCRKYKDSNWVSTVRRWPPSLARQLDNFL 482
I RR PG ADM VALAA W AE++WQ CD I VGCRKY+D +W+S +RRWPPS+ L +FL
Sbjct: 292 IARRAPGSADMRVALAALLWRRGQEAAAEEQWQFACDNITVGCRKYQDRDWLSRIRRWPPSMCAALSDFL 361
BLAST of mRNA_P-wetherbeei_contig5625.1.1 vs. uniprot
Match: A0A813HZU1_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HZU1_POLGL) HSP 1 Score: 88.2 bits (217), Expect = 2.220e-17 Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 3
Query: 273 IVRRVPGYADMHVALAAHAWGERDIPTAEQEWQLTCDRIDVGCRKYKDSNWVSTVRRWPPSLARQLDNFLNRRIE 497
+VR+ PG DMHVALAA W + I AE EW C++I GC YKD WV+ +RRWP SLA+ L +FL ++
Sbjct: 73 VVRKDPGLTDMHVALAAVYWEDGKIDLAETEWAFACEKITSGCAAYKDLEWVTEIRRWPLSLAKNLQSFLGEGLQ 147 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5625.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5625.1.1 >prot_P-wetherbeei_contig5625.1.1 ID=prot_P-wetherbeei_contig5625.1.1|Name=mRNA_P-wetherbeei_contig5625.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=66bp MHVALAAHAWGERDIPTAEQEWQLTCDRIDVGCRKYKDSNWVSTVRRWPPback to top mRNA from alignment at P-wetherbeei_contig5625:2..1024+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5625.1.1 ID=mRNA_P-wetherbeei_contig5625.1.1|Name=mRNA_P-wetherbeei_contig5625.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1023bp|location=Sequence derived from alignment at P-wetherbeei_contig5625:2..1024+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5625:2..1024+ >mRNA_P-wetherbeei_contig5625.1.1 ID=mRNA_P-wetherbeei_contig5625.1.1|Name=mRNA_P-wetherbeei_contig5625.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=198bp|location=Sequence derived from alignment at P-wetherbeei_contig5625:2..1024+ (Phaeothamnion wetherbeei SAG_119_79)back to top |