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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 643 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Cds size | 513 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683185951.3487997-CDS-P-wetherbeei_contig12512:1..259 | 1683185951.3487997-CDS-P-wetherbeei_contig12512:1..259 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig12512 2..259 - |
| 1683185951.356011-CDS-P-wetherbeei_contig12512:1191..1353 | 1683185951.356011-CDS-P-wetherbeei_contig12512:1191..1353 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig12512 1192..1353 - |
| 1683185951.3640852-CDS-P-wetherbeei_contig12512:1561..1654 | 1683185951.3640852-CDS-P-wetherbeei_contig12512:1561..1654 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig12512 1562..1654 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683185951.3802178-UTR-P-wetherbeei_contig12512:1654..1697 | 1683185951.3802178-UTR-P-wetherbeei_contig12512:1654..1697 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig12512 1655..1697 - |
| 1683185951.3946524-UTR-P-wetherbeei_contig12512:1881..1968 | 1683185951.3946524-UTR-P-wetherbeei_contig12512:1881..1968 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig12512 1882..1968 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12512.1.2 >prot_P-wetherbeei_contig12512.1.2 ID=prot_P-wetherbeei_contig12512.1.2|Name=mRNA_P-wetherbeei_contig12512.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=171bp
MQYTTKTSVQSFAMVLVVQVDEAVNRLTILQVSENFAEHGYRPHEMIGRD
AREILVGPADVKALRRSVLLCRKNRRSDHPMNEKQIWETFVALEMFDGTL
QVADDNPEGRKGGAETNGNGGSGGGGATANSATANGNGAAEHGTDAKNAF
SDYIDQLYSKWKHAAINLAYG back to topmRNA from alignment at P-wetherbeei_contig12512:2..1968- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig12512.1.2 ID=mRNA_P-wetherbeei_contig12512.1.2|Name=mRNA_P-wetherbeei_contig12512.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1967bp|location=Sequence derived from alignment at P-wetherbeei_contig12512:2..1968- (Phaeothamnion wetherbeei SAG_119_79)
ATACCAACCCGACACTTTTTCCGCTGGCTGCGTACAGCGATGTTTTCCGT
GACCCGAGCCAGATCCCAACGAACGCCGTCACTGCAAGTGAGACAAGAGG
CATATAAAGGAAGAGAGGCGGACGAAGTTCTTGAGGCCTCCTTTGGTAGA
AGCAAGAGTTCGATGCGTGCGTTAAAGACTGTTCGATGCATGCATTAGCC
TTGGTTTGTCATGGTCCTGTGAAGCGCTCGCTCTCCACCTATCGCCCTCT
ACCCACCTTGACCTTCTCTAGTAACTTTGCCGTGCCTTTCATTACAGTGG
TGCGGAACGAGCTCATGCAATACACAACTAAAACCAGTGTACAAAGCTTT
GCAATGGTGCTGGTCGTCCAGGTCGACGAGGCGGTGAACCGCTTGACGAT
CTTGCAGGTGACGAAGGTTGGAAAATGCAGCAGACCTGCTGCATTCATCC
AGCGTTGTTCTAATACTATTACTAGCGTCCTCGGTTCATGTCCAGTGTAC
CCGCTCGCCATGGCCTCCCTACTTTGCAGAATTGCCATGTGTTTCTCCAC
CACCGTGGTGCCCGGCATCTCTAGCCAAACATTGCAGAAATGGTGCGCCG
AAACGCCGATCACAGGTCTCGGAGAATTTTGCGGAGCATGGCTACAGGCC
GCACGAAATGATCGGCCGCGACGCCCGCGAGATCTTGGTGGGGCCGGCGG
ACGTCAAGGCGCTACGGCGGTCCGTGCTGCTCTGCCGGAAAAACCGGCGC
TCCGATCACCCCATGAACGAAAAGCAGGCAGGCTGGCATTTTATCTGTGT
TTGGTTCCGGGGCGTGTGGCCGGATGATGGCATTTTTTCCCCTGGTTGCT
TCCGTTTTCTTGGAGGTTGAGAGAGATGCGTGACGGGGGGCTTTTATGAC
CACCTTGCATATATTCTCGGTTTCTCTCAGGCATCTTTCTGTCAACGTAA
TGGTTGCCGGCTGGGATGCCTGTCCGCGGAACGTATTGAAATCGTTTTTT
GGACGCATGCTTTATTTATATTGGATGCGGCTCTTGTTTATTAATAGCTG
TTTCATTCTTGCCTTGTGGTGGAGTACTTTTCTTTGCCGCTGAAGAGTGA
CGCCGCGTTAACATGAATAGAGTAGGCTTGGTATTTTTGGCTTTTGGCCC
TTCTTGGTGAGCAAGAAGACGGTAATGTCAGTTTGTTGCGTTCTTTCTCT
CTTTTCTGTGTTCCATTATTTTCGCACCATGGATGCCTGTACGACGATTC
GAGAGCTTGCCAGCTTTTTTGTTGTTTACCTGCTACCATTGACGTTGATT
TTTGGGTGCAATGAAAAACCCAGGCGTCCCTCCGAGGTCGAGTCACCAAG
CCTTTCCTGATTTACTTAGAAAGCCAACAAATAACGTGTGTCTCCAGAAA
GGGGTTTTTGTCTCCGAAAGCTGTTGCGATTGAAAATATTCGGAAGTCCC
ACTTATTAAGAGTCCTTGGACTTGCTGTTGTCCTGGATTTCTCGGCTCTC
GGTGCTTTATAGGACACCTAACTCCAAAGTGTTGATACCGGAACTATTGT
ATCCGTTCCTGTGCCAACCCTACCATCGCCGGCTTCCGGCGCGTCTTTCC
TTCCTTCCCATTGCCGCCCGTGGAATGCTACCCTGGCGACCCACATTCAT
TTTTGGCCGTTGCGTGCTCTTGGTGCTGGACGCCTTTGCCGTCTTTCCCG
CCGTTACAGATCTGGGAGACGTTCGTGGCGCTGGAAATGTTCGACGGGAC
GCTGCAGGTGGCGGACGACAACCCCGAAGGCCGCAAGGGTGGCGCTGAAA
CCAACGGTAACGGCGGCAGCGGCGGCGGCGGCGCGACCGCCAACAGCGCC
ACGGCGAATGGCAACGGCGCTGCCGAGCACGGCACCGACGCGAAGAACGC
CTTTTCAGACTATATCGACCAGCTCTACTCCAAATGGAAGCACGCGGCGA
TCAACCTGGCGTACGGC back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig12512:2..1968- >mRNA_P-wetherbeei_contig12512.1.2 ID=mRNA_P-wetherbeei_contig12512.1.2|Name=mRNA_P-wetherbeei_contig12512.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig12512:2..1968- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAATACACAACTAAAACCAGTGTACAAAGCTTTGCAATGGTGCTGGT
CGTCCAGGTCGACGAGGCGGTGAACCGCTTGACGATCTTGCAGGTCTCGG
AGAATTTTGCGGAGCATGGCTACAGGCCGCACGAAATGATCGGCCGCGAC
GCCCGCGAGATCTTGGTGGGGCCGGCGGACGTCAAGGCGCTACGGCGGTC
CGTGCTGCTCTGCCGGAAAAACCGGCGCTCCGATCACCCCATGAACGAAA
AGCAGATCTGGGAGACGTTCGTGGCGCTGGAAATGTTCGACGGGACGCTG
CAGGTGGCGGACGACAACCCCGAAGGCCGCAAGGGTGGCGCTGAAACCAA
CGGTAACGGCGGCAGCGGCGGCGGCGGCGCGACCGCCAACAGCGCCACGG
CGAATGGCAACGGCGCTGCCGAGCACGGCACCGACGCGAAGAACGCCTTT
TCAGACTATATCGACCAGCTCTACTCCAAATGGAAGCACGCGGCGATCAA
CCTGGCGTACGGC back to top
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