mRNA_P-wetherbeei_contig56238.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig56238.1.1 vs. uniprot
Match: UPI001FAA5D4D (AAA family ATPase n=1 Tax=Nocardioides sp. SR21 TaxID=2919501 RepID=UPI001FAA5D4D) HSP 1 Score: 169 bits (429), Expect = 1.600e-46 Identity = 86/115 (74.78%), Postives = 100/115 (86.96%), Query Frame = 1
Query: 13 FDAFVPRLVREWIL-DDAELRHRRLAGTLVFADVSGFTKMSDRLSRRGKVGAETIAGVIETCFTQLLDVAHTFGGTLLQFGGDAVLLFYRGAGHEVRAASAALEMRRTMRSLGEL 354
F+ +VPRLVREW L DD+ HRR+ GTLVFADVSGFTKMS+RLSR+GKVGAE I GVIE+CFT+LL VA +FGGTL+QFGGDAVLLF+R HE RAA+A+LEMRRT+RSLGEL
Sbjct: 7 FEVYVPRLVREWALHDDSTSLHRRMPGTLVFADVSGFTKMSERLSRQGKVGAENIVGVIESCFTRLLAVASSFGGTLVQFGGDAVLLFFRDTAHEQRAAAASLEMRRTIRSLGEL 121
BLAST of mRNA_P-wetherbeei_contig56238.1.1 vs. uniprot
Match: A0A3D0RY52_9ACTN (Uncharacterized protein n=1 Tax=Nocardioides sp. TaxID=35761 RepID=A0A3D0RY52_9ACTN) HSP 1 Score: 167 bits (424), Expect = 7.530e-46 Identity = 85/118 (72.03%), Postives = 101/118 (85.59%), Query Frame = 1
Query: 7 GVFDAFVPRLVREWILDDAELR--HRRLAGTLVFADVSGFTKMSDRLSRRGKVGAETIAGVIETCFTQLLDVAHTFGGTLLQFGGDAVLLFYRGAGHEVRAASAALEMRRTMRSLGEL 354
G F+ +VP+LVREW D AE HR L GTLVFADVSGFTK+S+RL++RGKVGAE+I VIE CFT+LLDVA + GGTL+QFGGDAVLLF+RGAGHE+RAA+AALEMRRT+RSLG +
Sbjct: 6 GPFELYVPQLVREWAADGAESASLHRSLPGTLVFADVSGFTKISERLAKRGKVGAESIVEVIEACFTRLLDVADSAGGTLIQFGGDAVLLFFRGAGHELRAAAAALEMRRTIRSLGAM 123
BLAST of mRNA_P-wetherbeei_contig56238.1.1 vs. uniprot
Match: A0A523EM26_9BACT (Adenylate/guanylate cyclase domain-containing protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A523EM26_9BACT) HSP 1 Score: 125 bits (315), Expect = 3.450e-33 Identity = 61/113 (53.98%), Postives = 84/113 (74.34%), Query Frame = 1
Query: 13 FDAFVPRLVREWILD-DAELRHRRLAGTLVFADVSGFTKMSDRLSRRGKVGAETIAGVIETCFTQLLDVAHTFGGTLLQFGGDAVLLFYRGAGHEVRAASAALEMRRTMRSLG 348
F +VPR+VREW+ D H+ + GT VF DVSGFT+MS+R++R GKVGAE + G+I F+QLL+ A+ +GG L++FGGDA+LLF+RG HE R A+A+L MR T+R +G
Sbjct: 26 FAPYVPRIVREWLNSPDPTSMHQSIEGTAVFVDVSGFTRMSERMARLGKVGAEEVTGIIGDTFSQLLEEAYAYGGRLIKFGGDALLLFFRGDEHERRGAAASLAMRATLRRIG 138
BLAST of mRNA_P-wetherbeei_contig56238.1.1 vs. uniprot
Match: A0A523EX00_9BACT (Uncharacterized protein n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A523EX00_9BACT) HSP 1 Score: 125 bits (315), Expect = 3.700e-31 Identity = 61/113 (53.98%), Postives = 84/113 (74.34%), Query Frame = 1
Query: 13 FDAFVPRLVREWILD-DAELRHRRLAGTLVFADVSGFTKMSDRLSRRGKVGAETIAGVIETCFTQLLDVAHTFGGTLLQFGGDAVLLFYRGAGHEVRAASAALEMRRTMRSLG 348
F +VPR+VREW+ D H+ + GT VF DVSGFT+MS+R++R GKVGAE + G+I F+QLL+ A+ +GG L++FGGDA+LLF+RG HE R A+A+L MR T+R +G
Sbjct: 26 FAPYVPRIVREWLNSPDPTSMHQSIEGTAVFVDVSGFTRMSERMARLGKVGAEEVTGIIGDTFSQLLEEAYAYGGRLIKFGGDALLLFFRGDEHERRGAAASLAMRTTLRRIG 138
BLAST of mRNA_P-wetherbeei_contig56238.1.1 vs. uniprot
Match: A0A2V2SH78_9BACT (Uncharacterized protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V2SH78_9BACT) HSP 1 Score: 121 bits (304), Expect = 1.130e-29 Identity = 55/111 (49.55%), Postives = 83/111 (74.77%), Query Frame = 1
Query: 22 FVPRLVREWILDDAELRHRRLAGTLVFADVSGFTKMSDRLSRRGKVGAETIAGVIETCFTQLLDVAHTFGGTLLQFGGDAVLLFYRGAGHEVRAASAALEMRRTMRSLGEL 354
+VPRL EW+ D E R+ ++ G+L F D+SGFT +++RLSR+GKVGAE + ++ +CF + L+ A+ FG ++++GGDAVLL ++GA HE R+A AA EM+RTMR +G +
Sbjct: 24 YVPRLALEWLRDHPERRYTQIEGSLAFVDISGFTNLTERLSRKGKVGAEEMNQILNSCFGEFLNSAYDFGAGVIKWGGDAVLLLFQGAEHEARSARAAWEMQRTMRRVGRI 134
BLAST of mRNA_P-wetherbeei_contig56238.1.1 vs. uniprot
Match: UPI001F52D2CB (tetratricopeptide repeat protein n=1 Tax=Microbacterium sp. H1-D42 TaxID=2925844 RepID=UPI001F52D2CB) HSP 1 Score: 120 bits (302), Expect = 2.100e-29 Identity = 59/113 (52.21%), Postives = 80/113 (70.80%), Query Frame = 1
Query: 7 GVFDAFVPRLVREWILDDAELRHRRLAGTLVFADVSGFTKMSDRLSRRGKVGAETIAGVIETCFTQLLDVAHTFGGTLLQFGGDAVLLFYRGAGHEVRAASAALEMRRTMRSL 345
V AF PR+V EW D++ HRR+ GT+VFAD+SGFT++++RL+RRG+VGAE ++ ++ F LL A + G LL++GGDAVLLF+RG H VRAA AA MR +R L
Sbjct: 10 AVLSAFAPRIVGEWSAGDSQRGHRRMPGTMVFADISGFTRLTERLARRGRVGAELLSDALDLTFATLLAPAFSDGADLLKWGGDAVLLFFRGEHHAVRAARAAHRMRAALREL 122
BLAST of mRNA_P-wetherbeei_contig56238.1.1 vs. uniprot
Match: A0A7Y3DFN6_9ACTN (Adenylate/guanylate cyclase domain-containing protein (Fragment) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y3DFN6_9ACTN) HSP 1 Score: 111 bits (277), Expect = 2.460e-29 Identity = 53/112 (47.32%), Postives = 79/112 (70.54%), Query Frame = 1
Query: 13 FDAFVPRLVREWILDDAELRHRRLAGTLVFADVSGFTKMSDRLSRRGKVGAETIAGVIETCFTQLLDVAHTFGGTLLQFGGDAVLLFYRGAGHEVRAASAALEMRRTMRSLG 348
F+ + PRL+ W E RH+ L GT+VF+D+SGFT +S+RL+++G+VG+E +A + F+++LDVA GG LL+FGGDA+LL + G H VR A+AA EM+R + +G
Sbjct: 7 FERYTPRLLTSW---PDETRHQSLPGTMVFSDISGFTALSERLAKKGRVGSEEVAAALNLVFSKMLDVAIGRGGDLLKFGGDALLLLFTGEDHGVRGATAAFEMKRRLSQVG 115
BLAST of mRNA_P-wetherbeei_contig56238.1.1 vs. uniprot
Match: UPI00056728A4 (hypothetical protein n=1 Tax=Knoellia aerolata TaxID=442954 RepID=UPI00056728A4) HSP 1 Score: 114 bits (284), Expect = 4.650e-29 Identity = 55/111 (49.55%), Postives = 75/111 (67.57%), Query Frame = 1
Query: 13 FDAFVPRLVREWILDDAELRHRRLAGTLVFADVSGFTKMSDRLSRRGKVGAETIAGVIETCFTQLLDVAHTFGGTLLQFGGDAVLLFYRGAGHEVRAASAALEMRRTMRSL 345
FDA+VPRL+ W+ + RHRR+ G++ F D+SGFT +++RL+RRGKVGAE ++ ++ F LL A G LL++GGDAVLL + G H RAA AA MR T+R L
Sbjct: 25 FDAYVPRLLAAWLTHEPGTRHRRVDGSIAFVDISGFTALTERLARRGKVGAELMSDTLDRTFDALLSAAREDGADLLKWGGDAVLLLFEGEDHPARAARAAHRMRATLRDL 135
BLAST of mRNA_P-wetherbeei_contig56238.1.1 vs. uniprot
Match: A0A7Y2IM82_9ACTN (AAA family ATPase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y2IM82_9ACTN) HSP 1 Score: 119 bits (299), Expect = 5.320e-29 Identity = 61/115 (53.04%), Postives = 84/115 (73.04%), Query Frame = 1
Query: 10 VFDAFVPRLVREWILDDAELRHRRLAGTLVFADVSGFTKMSDRLSRRGKVGAETIAGVIETCFTQLLDVAHTFGGTLLQFGGDAVLLFYRGAGHEVRAASAALEMRRTMRSLGEL 354
V +VPRL+ W +AE+ ++R+ GT+VF D+SGFT MS+RL+RRG+VGAE + V+ T FT+LL VAH +GG LL+FGGDA+LL ++G+ H R AA MRR +RS+G L
Sbjct: 5 VHRTYVPRLLDSW--PEAEV-YQRVMGTMVFVDISGFTAMSERLARRGRVGAEEVVSVLNTVFTELLTVAHAYGGDLLKFGGDALLLLFQGSEHARRGCRAASLMRRRLRSVGRL 116
BLAST of mRNA_P-wetherbeei_contig56238.1.1 vs. uniprot
Match: A0A7W0NJG1_9ACTN (AAA family ATPase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W0NJG1_9ACTN) HSP 1 Score: 119 bits (299), Expect = 5.330e-29 Identity = 61/115 (53.04%), Postives = 78/115 (67.83%), Query Frame = 1
Query: 4 TGVFDAFVPRLVREWILDDAELRHRRLAGTLVFADVSGFTKMSDRLSRRGKVGAETIAGVIETCFTQLLDVAHTFGGTLLQFGGDAVLLFYRGAGHEVRAASAALEMRRTMRSLG 348
+G +VPRL EW+ D+ E R + GTL F D+SGFT MS+RL+R GKVGAE + V+ F+ LLD A+ +GG LL+FGGDA+LL Y G H RA AA +MRRT+R LG
Sbjct: 20 SGELVPYVPRLTIEWLRDEPERLWREVDGTLAFVDISGFTAMSERLARFGKVGAEEVTEVMNGVFSSLLDDAYAYGGGLLKFGGDALLLLYEGEEHAPRAVRAAHKMRRTLRELG 134 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56238.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig56238.1.1 >prot_P-wetherbeei_contig56238.1.1 ID=prot_P-wetherbeei_contig56238.1.1|Name=mRNA_P-wetherbeei_contig56238.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=118bp MTGVFDAFVPRLVREWILDDAELRHRRLAGTLVFADVSGFTKMSDRLSRRback to top mRNA from alignment at P-wetherbeei_contig56238:25..378- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig56238.1.1 ID=mRNA_P-wetherbeei_contig56238.1.1|Name=mRNA_P-wetherbeei_contig56238.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=354bp|location=Sequence derived from alignment at P-wetherbeei_contig56238:25..378- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig56238:25..378- >mRNA_P-wetherbeei_contig56238.1.1 ID=mRNA_P-wetherbeei_contig56238.1.1|Name=mRNA_P-wetherbeei_contig56238.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=354bp|location=Sequence derived from alignment at P-wetherbeei_contig56238:25..378- (Phaeothamnion wetherbeei SAG_119_79)back to top |