mRNA_P-wetherbeei_contig56224.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig56224.1.1
Unique NamemRNA_P-wetherbeei_contig56224.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig56224.1.1 vs. uniprot
Match: A0A2E2J800_9GAMM (Metal-dependent hydrolase n=1 Tax=Polycyclovorans sp. TaxID=2024852 RepID=A0A2E2J800_9GAMM)

HSP 1 Score: 319 bits (818), Expect = 4.810e-108
Identity = 158/171 (92.40%), Postives = 164/171 (95.91%), Query Frame = 1
Query:    1 RRQDEKVRKAGIAFIKQEHYHAREHDDMNNALIEQGVPLDVVERSFKRIRATLERFTPQDMHLSMMAAFEHFTATFAAVFIDNPDILEDSDKKVAAMLYWHFVEETEHKSVTFDVFQDAVGSYPQRVAGMLIASAVFLPMVEGHMLYLLYKEKQLLNWRSMLKCLQLQIGP 513
            R QDE VRKAGIAFIKQEHYHAREHDDMNNALI QGVPLDVVERSFKRIR TLER TP DMHLSMMAAFEHFTATFAAVFIDNPD+L++SDKKVAAMLYWHFVEETEHKSVTFDVFQDAVGSYPQRVAGMLIASA+FLPMVEGHMLYLLYKEKQLLNWRSML CL+LQ+GP
Sbjct:   66 RLQDESVRKAGIAFIKQEHYHAREHDDMNNALIAQGVPLDVVERSFKRIRGTLERLTPPDMHLSMMAAFEHFTATFAAVFIDNPDMLDNSDKKVAAMLYWHFVEETEHKSVTFDVFQDAVGSYPQRVAGMLIASAIFLPMVEGHMLYLLYKEKQLLNWRSMLNCLKLQVGP 236          
BLAST of mRNA_P-wetherbeei_contig56224.1.1 vs. uniprot
Match: UPI001CA72918 (metal-dependent hydrolase n=1 Tax=Algiphilus sp. NNCM1 TaxID=2834409 RepID=UPI001CA72918)

HSP 1 Score: 276 bits (707), Expect = 3.540e-91
Identity = 134/167 (80.24%), Postives = 150/167 (89.82%), Query Frame = 1
Query:   10 DEKVRKAGIAFIKQEHYHAREHDDMNNALIEQGVPLDVVERSFKRIRATLERFTPQDMHLSMMAAFEHFTATFAAVFIDNPDILEDSDKKVAAMLYWHFVEETEHKSVTFDVFQDAVGSYPQRVAGMLIASAVFLPMVEGHMLYLLYKEKQLLNWRSMLKCLQLQIG 510
            DE VRKAGIAFIKQEHYHAREHDDMN ALI+QGVPLDVVE +FKRIRA LER TP  MHLSMMA+FEHFTAT AAVFID+P++L+DSD ++AAML+WHFVEETEHKSVTFDVFQDAVGSYPQRV GMLIASA+FLP++EGHMLYL +K+ QL NWRS L+CL  Q G
Sbjct:   70 DETVRKAGIAFIKQEHYHAREHDDMNQALIQQGVPLDVVEANFKRIRAMLERLTPPSMHLSMMASFEHFTATIAAVFIDHPEMLDDSDPQIAAMLFWHFVEETEHKSVTFDVFQDAVGSYPQRVLGMLIASALFLPLIEGHMLYLAWKDGQLRNWRSALRCLDTQFG 236          
BLAST of mRNA_P-wetherbeei_contig56224.1.1 vs. uniprot
Match: A0A2E2J7K8_9GAMM (Metal-dependent hydrolase n=1 Tax=Polycyclovorans sp. TaxID=2024852 RepID=A0A2E2J7K8_9GAMM)

HSP 1 Score: 201 bits (511), Expect = 1.400e-61
Identity = 98/165 (59.39%), Postives = 125/165 (75.76%), Query Frame = 1
Query:   10 DEKVRKAGIAFIKQEHYHAREHDDMNNALIEQGVPLDVVERSFKRIRATLERFTPQDMHLSMMAAFEHFTATFAAVFIDNPDILEDSDKKVAAMLYWHFVEETEHKSVTFDVFQDAVGSYPQRVAGMLIASAVFLPMVEGHMLYLLYKEKQLLNWRSMLKCLQLQ 504
            DEKVRKAGI FIKQEH+HAREHD MN A++  GVP+D VE +FKR R  L+RF  +DM LS MAA EHFT T +AVF+D+P+I +D D  + AM+ WH +EETEHKSV+FDV+QDAVGSYP+R+AGM++ + +F  + E   L L+ K+  L NWRS LK L+ Q
Sbjct:   67 DEKVRKAGIDFIKQEHFHAREHDIMNKAVMAHGVPVDKVEDAFKRTRTFLQRFLSEDMQLSTMAAGEHFTGTISAVFVDHPEIFKDFDPSLGAMIAWHMIEETEHKSVSFDVYQDAVGSYPKRIAGMVLMTGIFFAISEYQRLILVAKDGHLFNWRSALKGLKFQ 231          
BLAST of mRNA_P-wetherbeei_contig56224.1.1 vs. uniprot
Match: UPI001CA6E4FB (metal-dependent hydrolase n=1 Tax=Algiphilus sp. NNCM1 TaxID=2834409 RepID=UPI001CA6E4FB)

HSP 1 Score: 195 bits (495), Expect = 3.440e-59
Identity = 95/165 (57.58%), Postives = 122/165 (73.94%), Query Frame = 1
Query:   10 DEKVRKAGIAFIKQEHYHAREHDDMNNALIEQGVPLDVVERSFKRIRATLERFTPQDMHLSMMAAFEHFTATFAAVFIDNPDILEDSDKKVAAMLYWHFVEETEHKSVTFDVFQDAVGSYPQRVAGMLIASAVFLPMVEGHMLYLLYKEKQLLNWRSMLKCLQLQ 504
            DEKVRKA + FIKQEHYHAREHD MN A+ + GVP+  VE++FK IR  L++    DM LSMMAA EHFT T +AVF+++P+I  D D K+ AM+ WH +EETEHKSV+FDV+QDAVGSY +R+AGM++ + VF  + E   L L+ ++ QL NWRS LK L  Q
Sbjct:   67 DEKVRKAAVDFIKQEHYHAREHDIMNEAVAKHGVPVAEVEQAFKNIRGFLQKILSDDMQLSMMAAGEHFTGTISAVFVEHPEIFRDFDPKLGAMIAWHMIEETEHKSVSFDVYQDAVGSYSKRIAGMILMTGVFFSISEYQRLKLVARDGQLFNWRSALKALDFQ 231          
BLAST of mRNA_P-wetherbeei_contig56224.1.1 vs. uniprot
Match: UPI0003B5F8B8 (metal-dependent hydrolase n=1 Tax=Perlucidibaca piscinae TaxID=392589 RepID=UPI0003B5F8B8)

HSP 1 Score: 178 bits (452), Expect = 2.060e-52
Identity = 89/164 (54.27%), Postives = 119/164 (72.56%), Query Frame = 1
Query:   10 DEKVRKAGIAFIKQEHYHAREHDDMNNALIEQGVPLDVVERSFKRIRATLERFTPQDMHLSMMAAFEHFTATFAAVFIDNPDILEDSDKKVAAMLYWHFVEETEHKSVTFDVFQDAVGS----YPQRVAGMLIASAVFLPMVEGHMLYLLYKEKQLLNWRSMLK 489
            D +VR+A I F KQE  HAREHD+MN A +E GVP+DVVER F RIR +L+     DM  S+ AAFEHFTA  ++V ++NPD+ +++D ++ AML+WHFVEETEHK V+FDVF +A G     Y +RV GM +A AV +P++ G+  YLLYK+ QL NWRS ++
Sbjct:   69 DPEVRQAAINFCKQERIHAREHDEMNKACVEHGVPIDVVERVFTRIRTSLQGSLSPDMQCSIAAAFEHFTAIISSVMLENPDLFDETDPELRAMLFWHFVEETEHKGVSFDVFVEASGGGLSGYFKRVGGMGLAVAVGVPIMVGNQAYLLYKDGQLTNWRSAIR 232          
BLAST of mRNA_P-wetherbeei_contig56224.1.1 vs. uniprot
Match: A0A3E0H6E7_9GAMM (Putative metal-dependent hydrolase n=1 Tax=Paraperlucidibaca baekdonensis TaxID=748120 RepID=A0A3E0H6E7_9GAMM)

HSP 1 Score: 174 bits (440), Expect = 1.090e-50
Identity = 86/171 (50.29%), Postives = 117/171 (68.42%), Query Frame = 1
Query:   10 DEKVRKAGIAFIKQEHYHAREHDDMNNALIEQGVPLDVVERSFKRIRATLERFTPQDMHLSMMAAFEHFTATFAAVFIDNPDILEDSDKKVAAMLYWHFVEETEHKSVTFDVFQDAVGS----YPQRVAGMLIASAVFLPMVEGHMLYLLYKEKQLLNWRSMLKCLQLQIG 510
            D +VRKA I F +QE  HAREHD+MN A + QGVP+D VE  F +IR T++     DM  SM AAFEHFTA  ++V ++NP++  +SD ++ AMLYWHFVEETEHK V+FDV+  A G     Y +RV GM + + + LP++ G+  YLL+K+KQL NWRS ++   +  G
Sbjct:   69 DPEVRKAAIDFCRQERIHAREHDEMNKACVAQGVPIDKVEAVFTKIRVTMQERLSLDMQSSMAAAFEHFTAVISSVMLENPELFNESDPELRAMLYWHFVEETEHKGVSFDVYVAASGGGIKGYLRRVGGMAMGTVLGLPLMVGNQAYLLHKDKQLTNWRSAMRMSNILFG 239          
BLAST of mRNA_P-wetherbeei_contig56224.1.1 vs. uniprot
Match: A0A2D4S839_9GAMM (Metal-dependent hydrolase n=1 Tax=Salinisphaeraceae bacterium TaxID=2026789 RepID=A0A2D4S839_9GAMM)

HSP 1 Score: 172 bits (435), Expect = 7.550e-50
Identity = 84/158 (53.16%), Postives = 115/158 (72.78%), Query Frame = 1
Query:   10 DEKVRKAGIAFIKQEHYHAREHDDMNNALIEQGVPLDVVERSFKRIRATLERFTPQDMHLSMMAAFEHFTATFAAVFIDNPDILEDSDKKVAAMLYWHFVEETEHKSVTFDVFQDAVGS----YPQRVAGMLIASAVFLPMVEGHMLYLLYKEKQLLN 471
            D  VRKA I FI+QE  HAREHD MN+ +I  G+PLD  E+ F RIR+ +E+    DM  +M AAFEHFTA  +++ + +P+I +D+  ++AAMLYWHFVEETEHKSV+FDVF D+VG     Y  R++ M +A+A+F+PM+ G+ LY L+K+KQLL 
Sbjct:   69 DPSVRKAAIGFIRQERTHAREHDVMNDIVIGHGIPLDEAEKLFVRIRSLMEKHMSDDMQSAMGAAFEHFTAIISSIMLRHPEIFDDTPPELAAMLYWHFVEETEHKSVSFDVFVDSVGGGARGYVMRISAMALATAIFVPMLHGNWLYFLWKDKQLLR 226          
BLAST of mRNA_P-wetherbeei_contig56224.1.1 vs. uniprot
Match: A0A2K9LFN1_9GAMM (Metal-dependent hydrolase n=7 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2K9LFN1_9GAMM)

HSP 1 Score: 171 bits (433), Expect = 1.130e-49
Identity = 86/161 (53.42%), Postives = 116/161 (72.05%), Query Frame = 1
Query:   10 DEKVRKAGIAFIKQEHYHAREHDDMNNALIEQGVPLDVVERSFKRIRATLERFTPQDMHLSMMAAFEHFTATFAAVFIDNPDILEDSDKKVAAMLYWHFVEETEHKSVTFDVFQDAVG----SYPQRVAGMLIASAVFLPMVEGHMLYLLYKEKQLLNWRS 480
            D +VRKA + FI+QE  HAREHD+MN   ++QGVP+D VE  FK IR  L+     DM  S+ AAFEHFTA  +AV +++P++ +++  ++ AMLYWHFVEETEHKSV+FDVF DA G    SY  R +GML+A A+  P++ G+  +LLYK+KQ+LN RS
Sbjct:   69 DPEVRKAALEFIRQERIHAREHDEMNAICVQQGVPIDKVEGIFKHIRKELQHRLSDDMQSSIAAAFEHFTAIISAVMLEHPELFDETHPELRAMLYWHFVEETEHKSVSFDVFVDASGGGLRSYRLRTSGMLLAIALGFPLMLGNQAFLLYKDKQILNLRS 229          
BLAST of mRNA_P-wetherbeei_contig56224.1.1 vs. uniprot
Match: A0A0B4XNJ1_9GAMM (Metal-dependent hydrolase n=1 Tax=Alcanivorax pacificus W11-5 TaxID=391936 RepID=A0A0B4XNJ1_9GAMM)

HSP 1 Score: 168 bits (425), Expect = 1.990e-48
Identity = 86/161 (53.42%), Postives = 115/161 (71.43%), Query Frame = 1
Query:   10 DEKVRKAGIAFIKQEHYHAREHDDMNNALIEQGVPLDVVERSFKRIRATLERFTPQDMHLSMMAAFEHFTATFAAVFIDNPDILEDSDKKVAAMLYWHFVEETEHKSVTFDVFQDAVG----SYPQRVAGMLIASAVFLPMVEGHMLYLLYKEKQLLNWRS 480
            D +VRKA I FI+QE  HAREHD+MN   ++ GVP+D VE  FK IR  L+     DM  S+ AAFEHFTA  ++V +++P++ +D+  ++ AMLYWHFVEETEHKSV+FDVF DA G    SY  R +GML+A A+  P++ G+  YLLYK++Q+LN RS
Sbjct:   69 DPEVRKAAIEFIRQERIHAREHDEMNAIGVQHGVPIDKVEGVFKLIRKQLQHRLSDDMQSSIAAAFEHFTAIISSVLLEHPELFDDTHPELRAMLYWHFVEETEHKSVSFDVFVDASGGGLRSYRLRTSGMLLAIALGFPIMIGNQTYLLYKDRQVLNLRS 229          
BLAST of mRNA_P-wetherbeei_contig56224.1.1 vs. uniprot
Match: UPI001CA653E6 (metal-dependent hydrolase n=1 Tax=Algiphilus sp. NNCM1 TaxID=2834409 RepID=UPI001CA653E6)

HSP 1 Score: 166 bits (421), Expect = 7.150e-48
Identity = 82/164 (50.00%), Postives = 115/164 (70.12%), Query Frame = 1
Query:   10 DEKVRKAGIAFIKQEHYHAREHDDMNNALIEQGVPLDVVERSFKRIRATLERFTPQDMHLSMMAAFEHFTATFAAVFIDNPDILEDSDKKVAAMLYWHFVEETEHKSVTFDVFQDAVG----SYPQRVAGMLIASAVFLPMVEGHMLYLLYKEKQLLNWRSMLK 489
            D  VRKA I FI+QEH HAREHD MN A++  G+P+D VE  FK +R TL+R+       ++ A FEHFTA  + V +D+P++ +D+  +V+AML+WHFVEETEHKSV+FDVF DA G    +Y  R+A + +  A+F+P+V G+ LY L+K++QL N  S L+
Sbjct:   69 DPSVRKAAIGFIRQEHTHAREHDAMNEAMVAHGIPVDRVEAVFKVVRQTLQRYLGDVSQCAIAATFEHFTAVISQVMLDHPELWDDTKPEVSAMLFWHFVEETEHKSVSFDVFMDASGGGFRAYAIRMATLALGVAIFVPLVHGNWLYFLWKDRQLSNVASALR 232          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56224.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E2J800_9GAMM4.810e-10892.40Metal-dependent hydrolase n=1 Tax=Polycyclovorans ... [more]
UPI001CA729183.540e-9180.24metal-dependent hydrolase n=1 Tax=Algiphilus sp. N... [more]
A0A2E2J7K8_9GAMM1.400e-6159.39Metal-dependent hydrolase n=1 Tax=Polycyclovorans ... [more]
UPI001CA6E4FB3.440e-5957.58metal-dependent hydrolase n=1 Tax=Algiphilus sp. N... [more]
UPI0003B5F8B82.060e-5254.27metal-dependent hydrolase n=1 Tax=Perlucidibaca pi... [more]
A0A3E0H6E7_9GAMM1.090e-5050.29Putative metal-dependent hydrolase n=1 Tax=Paraper... [more]
A0A2D4S839_9GAMM7.550e-5053.16Metal-dependent hydrolase n=1 Tax=Salinisphaeracea... [more]
A0A2K9LFN1_9GAMM1.130e-4953.42Metal-dependent hydrolase n=7 Tax=Gammaproteobacte... [more]
A0A0B4XNJ1_9GAMM1.990e-4853.42Metal-dependent hydrolase n=1 Tax=Alcanivorax paci... [more]
UPI001CA653E67.150e-4850.00metal-dependent hydrolase n=1 Tax=Algiphilus sp. N... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56224contigP-wetherbeei_contig56224:5..517 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog83406.HDN1F_17610
PFAMsMetal_hydrol
Model size513
Max annot lvl1236|Gammaproteobacteria
KEGG koko:K07044
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.31e-48
EggNOG OGsCOG3687@1|root,COG3687@2|Bacteria,1MWGV@1224|Proteobacteria,1RZKP@1236|Gammaproteobacteria,1J7V5@118884|unclassified Gammaproteobacteria
Descriptionmetal-dependent hydrolase
Cds size513
COG categoryS
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186836.6241004-CDS-P-wetherbeei_contig56224:4..5171683186836.6241004-CDS-P-wetherbeei_contig56224:4..517Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig56224 5..517 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56224.1.1prot_P-wetherbeei_contig56224.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig56224 5..517 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig56224.1.1

>prot_P-wetherbeei_contig56224.1.1 ID=prot_P-wetherbeei_contig56224.1.1|Name=mRNA_P-wetherbeei_contig56224.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=171bp
RRQDEKVRKAGIAFIKQEHYHAREHDDMNNALIEQGVPLDVVERSFKRIR
ATLERFTPQDMHLSMMAAFEHFTATFAAVFIDNPDILEDSDKKVAAMLYW
HFVEETEHKSVTFDVFQDAVGSYPQRVAGMLIASAVFLPMVEGHMLYLLY
KEKQLLNWRSMLKCLQLQIGP
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mRNA from alignment at P-wetherbeei_contig56224:5..517-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig56224.1.1 ID=mRNA_P-wetherbeei_contig56224.1.1|Name=mRNA_P-wetherbeei_contig56224.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig56224:5..517- (Phaeothamnion wetherbeei SAG_119_79)
CGCCGCCAGGACGAGAAGGTGCGCAAGGCGGGAATCGCCTTCATCAAGCA GGAGCACTACCACGCGCGCGAACATGACGACATGAACAACGCGCTGATCG AGCAGGGCGTTCCACTCGACGTGGTGGAGCGCAGCTTCAAGCGTATCCGC GCAACGCTGGAACGATTCACGCCGCAGGACATGCACCTGTCGATGATGGC GGCGTTCGAACATTTTACCGCGACCTTTGCGGCGGTGTTCATCGACAATC CGGATATACTGGAAGATTCCGACAAGAAGGTCGCGGCGATGCTGTACTGG CATTTCGTCGAGGAAACCGAGCACAAGTCGGTGACCTTCGACGTGTTCCA GGACGCGGTCGGCAGCTATCCGCAGCGCGTCGCCGGAATGCTGATTGCCA GCGCAGTCTTCCTGCCGATGGTCGAGGGCCACATGCTCTACCTGCTGTAC AAGGAAAAGCAGCTGCTAAACTGGCGCTCCATGCTGAAGTGCCTGCAGTT GCAGATCGGTCCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig56224:5..517-

>mRNA_P-wetherbeei_contig56224.1.1 ID=mRNA_P-wetherbeei_contig56224.1.1|Name=mRNA_P-wetherbeei_contig56224.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig56224:5..517- (Phaeothamnion wetherbeei SAG_119_79)
CGCCGCCAGGACGAGAAGGTGCGCAAGGCGGGAATCGCCTTCATCAAGCA
GGAGCACTACCACGCGCGCGAACATGACGACATGAACAACGCGCTGATCG
AGCAGGGCGTTCCACTCGACGTGGTGGAGCGCAGCTTCAAGCGTATCCGC
GCAACGCTGGAACGATTCACGCCGCAGGACATGCACCTGTCGATGATGGC
GGCGTTCGAACATTTTACCGCGACCTTTGCGGCGGTGTTCATCGACAATC
CGGATATACTGGAAGATTCCGACAAGAAGGTCGCGGCGATGCTGTACTGG
CATTTCGTCGAGGAAACCGAGCACAAGTCGGTGACCTTCGACGTGTTCCA
GGACGCGGTCGGCAGCTATCCGCAGCGCGTCGCCGGAATGCTGATTGCCA
GCGCAGTCTTCCTGCCGATGGTCGAGGGCCACATGCTCTACCTGCTGTAC
AAGGAAAAGCAGCTGCTAAACTGGCGCTCCATGCTGAAGTGCCTGCAGTT
GCAGATCGGTCCC
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