mRNA_P-wetherbeei_contig56003.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig56003.1.1
Unique NamemRNA_P-wetherbeei_contig56003.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig56003.1.1 vs. uniprot
Match: A0A0S8CPY2_9PROT (AAA family ATPase n=1 Tax=Betaproteobacteria bacterium SG8_40 TaxID=1703389 RepID=A0A0S8CPY2_9PROT)

HSP 1 Score: 292 bits (748), Expect = 5.470e-97
Identity = 145/173 (83.82%), Postives = 159/173 (91.91%), Query Frame = 1
Query:    1 PGVGKTKLVQSMADVLHLKFSRIQFTPDLMPGDIIGTNIVREDDAGHKSFEFQRGPIFANMVLADEINRATPKTQSALLEAMQENSVSAAGRTHPLDQPFFVLATQNPIEMEGTYPLPEAQMDRFFFKLKLDFPDVDQLHLIIDRTTRQEEPAVRRVLEQGQILQMRDTARAI 519
            PGVGKTKLVQ++ADV+HL+FSRIQFTPDLMPGDIIGTN+VRED +G K FEFQ+GPIFANMVLADEINRATPKTQSALLEAMQENSVSA G TH LDQPFFVLATQNPIEMEGTYPLPEAQMDRF FKL+LDFP  DQL+ I+DRTT+Q EP VRRVLE+ QIL+MR TARA+
Sbjct:   53 PGVGKTKLVQTLADVMHLEFSRIQFTPDLMPGDIIGTNVVREDASGQKFFEFQQGPIFANMVLADEINRATPKTQSALLEAMQENSVSAGGDTHNLDQPFFVLATQNPIEMEGTYPLPEAQMDRFLFKLRLDFPGADQLYSIVDRTTQQSEPKVRRVLEKEQILEMRSTARAV 225          
BLAST of mRNA_P-wetherbeei_contig56003.1.1 vs. uniprot
Match: A0A2E1THP1_9PROT (AAA family ATPase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2E1THP1_9PROT)

HSP 1 Score: 283 bits (724), Expect = 2.400e-93
Identity = 141/171 (82.46%), Postives = 153/171 (89.47%), Query Frame = 1
Query:    1 PGVGKTKLVQSMADVLHLKFSRIQFTPDLMPGDIIGTNIVREDDAGHKSFEFQRGPIFANMVLADEINRATPKTQSALLEAMQENSVSAAGRTHPLDQPFFVLATQNPIEMEGTYPLPEAQMDRFFFKLKLDFPDVDQLHLIIDRTTRQEEPAVRRVLEQGQILQMRDTAR 513
            PGVGKTKLVQ++ADVL L FSRIQFTPDLMPGDIIGTNIV EDD G K+FEFQ GPIFANMVLADEINRATPKTQSALLEAMQENSVSA G T  LDQP FVLATQNPIEMEGTYPLPEAQMDRF FKLKLDFP  ++LH I+DRTT+++EP+V RVL++ QILQMRD AR
Sbjct:   53 PGVGKTKLVQTLADVLDLSFSRIQFTPDLMPGDIIGTNIVNEDDKGRKTFEFQSGPIFANMVLADEINRATPKTQSALLEAMQENSVSAGGETRKLDQPVFVLATQNPIEMEGTYPLPEAQMDRFLFKLKLDFPSAEELHTIVDRTTQRDEPSVTRVLDKDQILQMRDVAR 223          
BLAST of mRNA_P-wetherbeei_contig56003.1.1 vs. uniprot
Match: A0A317H090_9PROT (AAA family ATPase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A317H090_9PROT)

HSP 1 Score: 273 bits (697), Expect = 3.080e-89
Identity = 135/173 (78.03%), Postives = 151/173 (87.28%), Query Frame = 1
Query:    1 PGVGKTKLVQSMADVLHLKFSRIQFTPDLMPGDIIGTNIVREDDAGHKSFEFQRGPIFANMVLADEINRATPKTQSALLEAMQENSVSAAGRTHPLDQPFFVLATQNPIEMEGTYPLPEAQMDRFFFKLKLDFPDVDQLHLIIDRTTRQEEPAVRRVLEQGQILQMRDTARAI 519
            PG+GKTKLVQ++ADVLHLKFSRIQFTPDLMP DI+G+ +VRE DAG K  EFQ GPIFAN+VLADEINRATPKTQSALLEAMQENSVSA G+THPL QPFFVLAT NP+EMEGTY LPEAQ+DRFFFKL+L FP  + L  I+DRTTRQ EP V RVL QGQIL+MR+T RA+
Sbjct:   54 PGIGKTKLVQTLADVLHLKFSRIQFTPDLMPADIMGSTVVRETDAGRKFLEFQPGPIFANLVLADEINRATPKTQSALLEAMQENSVSAGGQTHPLQQPFFVLATMNPLEMEGTYSLPEAQLDRFFFKLRLGFPTAEGLSEILDRTTRQMEPQVERVLGQGQILEMRETVRAV 226          
BLAST of mRNA_P-wetherbeei_contig56003.1.1 vs. uniprot
Match: A0A349YBN5_9PROT (AAA family ATPase n=3 Tax=Betaproteobacteria TaxID=28216 RepID=A0A349YBN5_9PROT)

HSP 1 Score: 259 bits (663), Expect = 4.250e-84
Identity = 127/173 (73.41%), Postives = 149/173 (86.13%), Query Frame = 1
Query:    1 PGVGKTKLVQSMADVLHLKFSRIQFTPDLMPGDIIGTNIVREDDAGHKSFEFQRGPIFANMVLADEINRATPKTQSALLEAMQENSVSAAGRTHPLDQPFFVLATQNPIEMEGTYPLPEAQMDRFFFKLKLDFPDVDQLHLIIDRTTRQEEPAVRRVLEQGQILQMRDTARAI 519
            PGVGKTKLVQ+++D   L FSRIQFTPDLMPGDIIG+N+VRE + G KSFEFQRGP+F N++LADEINRATPKTQSALLEAMQENSVSA G TH LDQPFFVLATQNPIEMEGTYPLPEAQMDRF +KL+LDFP+   L  I++RTT+Q++     VL + +IL+MR+TARA+
Sbjct:   53 PGVGKTKLVQTLSDATDLGFSRIQFTPDLMPGDIIGSNVVRETEDGKKSFEFQRGPVFTNILLADEINRATPKTQSALLEAMQENSVSAGGSTHKLDQPFFVLATQNPIEMEGTYPLPEAQMDRFLYKLRLDFPEASDLLTIVERTTQQDDLTASHVLGKTEILEMRETARAV 225          
BLAST of mRNA_P-wetherbeei_contig56003.1.1 vs. uniprot
Match: A0A2V8JE45_9BACT (AAA family ATPase n=6 Tax=unclassified Acidobacteria TaxID=305072 RepID=A0A2V8JE45_9BACT)

HSP 1 Score: 254 bits (650), Expect = 3.840e-82
Identity = 122/173 (70.52%), Postives = 145/173 (83.82%), Query Frame = 1
Query:    1 PGVGKTKLVQSMADVLHLKFSRIQFTPDLMPGDIIGTNIVREDDAGHKSFEFQRGPIFANMVLADEINRATPKTQSALLEAMQENSVSAAGRTHPLDQPFFVLATQNPIEMEGTYPLPEAQMDRFFFKLKLDFPDVDQLHLIIDRTTRQEEPAVRRVLEQGQILQMRDTARAI 519
            PG+GKTKLV +++DV+ LKFSRIQFTPDLMP DI GTN+V+ED  G K  EFQ GPIF+N+VLADE+NRATPKTQSALLEAM+E SV+   RTH LD PFFVLATQNP+EMEGTYPLPEAQ+DRFF KLK+D+P  D LH I++RTT+ +EP V RVL QG++L MR T RA+
Sbjct:   53 PGLGKTKLVSTLSDVMRLKFSRIQFTPDLMPADITGTNVVQEDAMGEKFLEFQPGPIFSNIVLADEVNRATPKTQSALLEAMEERSVTVGKRTHKLDSPFFVLATQNPLEMEGTYPLPEAQLDRFFLKLKVDYPTKDSLHTILNRTTKNKEPEVNRVLGQGEVLDMRKTVRAV 225          
BLAST of mRNA_P-wetherbeei_contig56003.1.1 vs. uniprot
Match: A0A2E4W8J0_9BACT (AAA family ATPase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2E4W8J0_9BACT)

HSP 1 Score: 250 bits (638), Expect = 2.600e-80
Identity = 122/173 (70.52%), Postives = 146/173 (84.39%), Query Frame = 1
Query:    1 PGVGKTKLVQSMADVLHLKFSRIQFTPDLMPGDIIGTNIVREDDAGHKSFEFQRGPIFANMVLADEINRATPKTQSALLEAMQENSVSAAGRTHPLDQPFFVLATQNPIEMEGTYPLPEAQMDRFFFKLKLDFPDVDQLHLIIDRTTRQEEPAVRRVLEQGQILQMRDTARAI 519
            PG+GKTKLVQ+++DVLHLKFSR+QFTPDLMP DIIGTN+V+E   G K  EFQ GP+FAN+VLADEINRATPKTQSALLEAMQE SVS   +T+ L+ PFFVLATQNP+EMEGTYPLPEAQ+DRFF KLK+ +P ++ LH I+DRTT+ EEP V RVL   Q+++MR TAR +
Sbjct:   53 PGLGKTKLVQTLSDVLHLKFSRVQFTPDLMPADIIGTNVVQERQHGQKFLEFQEGPLFANIVLADEINRATPKTQSALLEAMQEKSVSVGKQTYKLELPFFVLATQNPLEMEGTYPLPEAQLDRFFVKLKVTYPSMESLHEILDRTTQFEEPDVERVLTGAQLMEMRRTAREV 225          
BLAST of mRNA_P-wetherbeei_contig56003.1.1 vs. uniprot
Match: A0A7V0Y2F2_9BACT (MoxR family ATPase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7V0Y2F2_9BACT)

HSP 1 Score: 249 bits (637), Expect = 3.570e-80
Identity = 119/173 (68.79%), Postives = 148/173 (85.55%), Query Frame = 1
Query:    1 PGVGKTKLVQSMADVLHLKFSRIQFTPDLMPGDIIGTNIVREDDAGHKSFEFQRGPIFANMVLADEINRATPKTQSALLEAMQENSVSAAGRTHPLDQPFFVLATQNPIEMEGTYPLPEAQMDRFFFKLKLDFPDVDQLHLIIDRTTRQEEPAVRRVLEQGQILQMRDTARAI 519
            PG+GKT+LV ++ADV+HLKFSRIQFTPDLMP DI GTNIV+E+ +G +S EFQ GPIFA+++LADE+NRATPKTQSALLEAM+E SV+   RT+ LD PFFVLATQNP+EMEGTYPLPEAQ+DRFF KLK+D+P  D LH+I++RTT+ E P V R+L+  QIL+MR T R++
Sbjct:   53 PGLGKTRLVSTLADVVHLKFSRIQFTPDLMPADITGTNIVQENASGERSLEFQPGPIFAHVILADEVNRATPKTQSALLEAMEEQSVTVGKRTYRLDAPFFVLATQNPLEMEGTYPLPEAQLDRFFVKLKVDYPSADSLHVILNRTTQVESPQVSRILDGPQILEMRKTVRSV 225          
BLAST of mRNA_P-wetherbeei_contig56003.1.1 vs. uniprot
Match: A0A2D6QYZ9_9BACT (AAA family ATPase n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2D6QYZ9_9BACT)

HSP 1 Score: 249 bits (636), Expect = 5.220e-80
Identity = 121/173 (69.94%), Postives = 146/173 (84.39%), Query Frame = 1
Query:    1 PGVGKTKLVQSMADVLHLKFSRIQFTPDLMPGDIIGTNIVREDDAGHKSFEFQRGPIFANMVLADEINRATPKTQSALLEAMQENSVSAAGRTHPLDQPFFVLATQNPIEMEGTYPLPEAQMDRFFFKLKLDFPDVDQLHLIIDRTTRQEEPAVRRVLEQGQILQMRDTARAI 519
            PG+GKTKLV +++DVLHLKF+R+QFTPDLMP DIIGTN+++E   G K  EFQ+GPIFAN+VLADEINRATPKTQSALLEAMQE SVS   RT+ L+ PFFVLATQNP+EMEGTYPLPEAQ+DRFF KLK+ +PD++ LH I+DRTT+  EP V RVL   Q+++MR TAR +
Sbjct:   53 PGLGKTKLVHTLSDVLHLKFARVQFTPDLMPADIIGTNVIQEGAKGEKFLEFQQGPIFANIVLADEINRATPKTQSALLEAMQEKSVSVGKRTYKLELPFFVLATQNPLEMEGTYPLPEAQLDRFFLKLKVAYPDMESLHEILDRTTQLNEPDVERVLTGEQLMEMRRTAREV 225          
BLAST of mRNA_P-wetherbeei_contig56003.1.1 vs. uniprot
Match: A0A2E9WXP4_9BACT (AAA family ATPase n=6 Tax=root TaxID=1 RepID=A0A2E9WXP4_9BACT)

HSP 1 Score: 248 bits (634), Expect = 1.080e-79
Identity = 118/173 (68.21%), Postives = 145/173 (83.82%), Query Frame = 1
Query:    1 PGVGKTKLVQSMADVLHLKFSRIQFTPDLMPGDIIGTNIVREDDAGHKSFEFQRGPIFANMVLADEINRATPKTQSALLEAMQENSVSAAGRTHPLDQPFFVLATQNPIEMEGTYPLPEAQMDRFFFKLKLDFPDVDQLHLIIDRTTRQEEPAVRRVLEQGQILQMRDTARAI 519
            PG+GKTK+V ++ADVLHL FSRIQFTPDLMPGDI+G+++V E D G K  +FQ+GPIF +++LADEINRATPKTQSALLEAMQE SV+    TH L  PFFVLATQNP+EMEGTYPLPEAQ+DRFF+KLK+ +P+   +H I+DRTTR+EEP    VL++ QIL MRDTAR++
Sbjct:   54 PGIGKTKIVATVADVLHLTFSRIQFTPDLMPGDIVGSDVVHESDTGEKHLDFQKGPIFTHILLADEINRATPKTQSALLEAMQERSVTVGTTTHQLQPPFFVLATQNPLEMEGTYPLPEAQLDRFFYKLKITYPEPHHMHEIMDRTTRREEPEAGMVLDRDQILVMRDTARSV 226          
BLAST of mRNA_P-wetherbeei_contig56003.1.1 vs. uniprot
Match: A0A2V8MIU8_9BACT (AAA family ATPase (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8MIU8_9BACT)

HSP 1 Score: 246 bits (627), Expect = 1.340e-79
Identity = 118/173 (68.21%), Postives = 142/173 (82.08%), Query Frame = 1
Query:    1 PGVGKTKLVQSMADVLHLKFSRIQFTPDLMPGDIIGTNIVREDDAGHKSFEFQRGPIFANMVLADEINRATPKTQSALLEAMQENSVSAAGRTHPLDQPFFVLATQNPIEMEGTYPLPEAQMDRFFFKLKLDFPDVDQLHLIIDRTTRQEEPAVRRVLEQGQILQMRDTARAI 519
            PG+GKTKLV +++DV+ LKFSR+QFTPDLMP DI GTN+V+ED  G K  EFQ GPIF+N+VLADE+NRATPK QSALLEAM+  SV+    TH LD PFFVLATQNP+EMEGTYPLPEAQ+DRFF KLK+D+P  D LH+I++RTT+  EP V RVL QG++L MR T RA+
Sbjct:   53 PGLGKTKLVSTLSDVMRLKFSRVQFTPDLMPADITGTNVVQEDALGEKFLEFQPGPIFSNIVLADEVNRATPKPQSALLEAMEGRSVTVGKTTHKLDSPFFVLATQNPLEMEGTYPLPEAQLDRFFMKLKVDYPTRDSLHIILNRTTKTNEPRVDRVLGQGEVLAMRKTVRAV 225          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56003.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0S8CPY2_9PROT5.470e-9783.82AAA family ATPase n=1 Tax=Betaproteobacteria bacte... [more]
A0A2E1THP1_9PROT2.400e-9382.46AAA family ATPase n=1 Tax=Proteobacteria bacterium... [more]
A0A317H090_9PROT3.080e-8978.03AAA family ATPase n=1 Tax=Proteobacteria bacterium... [more]
A0A349YBN5_9PROT4.250e-8473.41AAA family ATPase n=3 Tax=Betaproteobacteria TaxID... [more]
A0A2V8JE45_9BACT3.840e-8270.52AAA family ATPase n=6 Tax=unclassified Acidobacter... [more]
A0A2E4W8J0_9BACT2.600e-8070.52AAA family ATPase n=1 Tax=Acidobacteria bacterium ... [more]
A0A7V0Y2F2_9BACT3.570e-8068.79MoxR family ATPase n=1 Tax=Acidobacteria bacterium... [more]
A0A2D6QYZ9_9BACT5.220e-8069.94AAA family ATPase n=2 Tax=Acidobacteria bacterium ... [more]
A0A2E9WXP4_9BACT1.080e-7968.21AAA family ATPase n=6 Tax=root TaxID=1 RepID=A0A2E... [more]
A0A2V8MIU8_9BACT1.340e-7968.21AAA family ATPase (Fragment) n=1 Tax=Acidobacteria... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56003contigP-wetherbeei_contig56003:2..520 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1499967.BAYZ01000095_gene4253
PFAMsAAA_3
Model size519
Max annot lvl2|Bacteria
KEGG koko:K03924
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.77e-72
EggNOG OGsCOG0714@1|root,COG0714@2|Bacteria,2NNV8@2323|unclassified Bacteria
DescriptionATPase family associated with various cellular activities (AAA)
Cds size519
COG categoryO
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186833.5464332-CDS-P-wetherbeei_contig56003:1..5201683186833.5464332-CDS-P-wetherbeei_contig56003:1..520Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig56003 2..520 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56003.1.1prot_P-wetherbeei_contig56003.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig56003 2..520 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig56003.1.1

>prot_P-wetherbeei_contig56003.1.1 ID=prot_P-wetherbeei_contig56003.1.1|Name=mRNA_P-wetherbeei_contig56003.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=173bp
PGVGKTKLVQSMADVLHLKFSRIQFTPDLMPGDIIGTNIVREDDAGHKSF
EFQRGPIFANMVLADEINRATPKTQSALLEAMQENSVSAAGRTHPLDQPF
FVLATQNPIEMEGTYPLPEAQMDRFFFKLKLDFPDVDQLHLIIDRTTRQE
EPAVRRVLEQGQILQMRDTARAI
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mRNA from alignment at P-wetherbeei_contig56003:2..520-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig56003.1.1 ID=mRNA_P-wetherbeei_contig56003.1.1|Name=mRNA_P-wetherbeei_contig56003.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig56003:2..520- (Phaeothamnion wetherbeei SAG_119_79)
CCCGGAGTGGGCAAGACCAAACTGGTGCAGTCCATGGCAGACGTGCTGCA CCTGAAATTCTCGCGCATCCAGTTTACCCCCGACCTGATGCCAGGCGACA TCATCGGCACGAATATCGTGCGCGAGGACGATGCCGGGCACAAGTCGTTC GAATTTCAGCGCGGCCCGATTTTCGCCAACATGGTGCTGGCCGATGAAAT CAACCGCGCGACACCCAAGACCCAGTCGGCGCTGCTCGAGGCGATGCAGG AAAACAGCGTGTCGGCAGCCGGGCGCACACATCCCCTCGATCAGCCGTTC TTCGTGCTTGCCACGCAGAATCCAATCGAGATGGAAGGAACGTATCCCTT GCCCGAAGCGCAGATGGATCGCTTCTTTTTCAAGCTGAAACTTGACTTTC CGGATGTCGATCAACTGCATTTGATCATCGACCGGACCACGCGCCAGGAG GAACCGGCGGTGCGTCGCGTGCTCGAGCAAGGGCAGATTTTACAAATGCG CGACACGGCGCGAGCGATA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig56003:2..520-

>mRNA_P-wetherbeei_contig56003.1.1 ID=mRNA_P-wetherbeei_contig56003.1.1|Name=mRNA_P-wetherbeei_contig56003.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig56003:2..520- (Phaeothamnion wetherbeei SAG_119_79)
CCCGGAGTGGGCAAGACCAAACTGGTGCAGTCCATGGCAGACGTGCTGCA
CCTGAAATTCTCGCGCATCCAGTTTACCCCCGACCTGATGCCAGGCGACA
TCATCGGCACGAATATCGTGCGCGAGGACGATGCCGGGCACAAGTCGTTC
GAATTTCAGCGCGGCCCGATTTTCGCCAACATGGTGCTGGCCGATGAAAT
CAACCGCGCGACACCCAAGACCCAGTCGGCGCTGCTCGAGGCGATGCAGG
AAAACAGCGTGTCGGCAGCCGGGCGCACACATCCCCTCGATCAGCCGTTC
TTCGTGCTTGCCACGCAGAATCCAATCGAGATGGAAGGAACGTATCCCTT
GCCCGAAGCGCAGATGGATCGCTTCTTTTTCAAGCTGAAACTTGACTTTC
CGGATGTCGATCAACTGCATTTGATCATCGACCGGACCACGCGCCAGGAG
GAACCGGCGGTGCGTCGCGTGCTCGAGCAAGGGCAGATTTTACAAATGCG
CGACACGGCGCGAGCGATA
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