mRNA_P-wetherbeei_contig560.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig560.5.1 vs. uniprot
Match: A0A7S2WH42_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WH42_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 5.960e-17 Identity = 52/125 (41.60%), Postives = 68/125 (54.40%), Query Frame = 1
Query: 1 VLAVWLPLSMGFDVLFVDDDLVWW----RSIEHLLATGDAADADIVMQDDGSRRHDFAPGFGNTGKGSKLPVCLYLVRHNPRSLYFMRTMLQSYDSIVNRATHQGVFDTLLDEHVVNTGLKSVTL 363
VL V+LP+ +GF+VLF D DLVW R H A + D D+ DDGSR F+P F NTG Y +R+N R+ YFM++ML S D I+ +HQ LL +H GL+ TL
Sbjct: 168 VLCVYLPVDLGFNVLFQDADLVWLQDPLRQYFHKPAV--SGDFDMYFMDDGSRSTRFSPFFSNTG--------FYYIRNNERTKYFMQSMLYSSDLIIEWRSHQSALVQLLADHASTFGLRVKTL 282
BLAST of mRNA_P-wetherbeei_contig560.5.1 vs. uniprot
Match: A0A7S2WG47_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WG47_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 8.980e-17 Identity = 52/125 (41.60%), Postives = 68/125 (54.40%), Query Frame = 1
Query: 1 VLAVWLPLSMGFDVLFVDDDLVWW----RSIEHLLATGDAADADIVMQDDGSRRHDFAPGFGNTGKGSKLPVCLYLVRHNPRSLYFMRTMLQSYDSIVNRATHQGVFDTLLDEHVVNTGLKSVTL 363
VL V+LP+ +GF+VLF D DLVW R H A + D D+ DDGSR F+P F NTG Y +R+N R+ YFM++ML S D I+ +HQ LL +H GL+ TL
Sbjct: 419 VLCVYLPVDLGFNVLFQDADLVWLQDPLRQYFHKPAV--SGDFDMYFMDDGSRSTRFSPFFSNTG--------FYYIRNNERTKYFMQSMLYSSDLIIEWRSHQSALVQLLADHASTFGLRVKTL 533
BLAST of mRNA_P-wetherbeei_contig560.5.1 vs. uniprot
Match: A0A7S0BYX8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BYX8_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 5.850e-16 Identity = 50/124 (40.32%), Postives = 66/124 (53.23%), Query Frame = 1
Query: 1 VLAVWLPLSMGFDVLFVDDDLVWWRSIEHLLATGDAA-DADIVMQDDGSRRHDFAPGFGNTGKGSKLPVCLYLVRHNPRSLYFMRTMLQSYDSIVNRATHQGVFDTLLDEHVVNTGLKSVTLHE 369
VLAV L +G+DVLF+D DLVW++ L ++ + D++ QDDGSR +AP NTG Y VRHNPR+ Y +L S D I +HQ LL EH GLK T+ +
Sbjct: 164 VLAVQLINHIGYDVLFMDVDLVWYKDPLELFHNDESLQEFDLIFQDDGSRSIRYAPFCANTG--------FYFVRHNPRTRYLFTALLYSGDVIKAAKSHQQALSALLSEHSSLYGLKVKTIED 279
BLAST of mRNA_P-wetherbeei_contig560.5.1 vs. uniprot
Match: A0A6U5L4L7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5L4L7_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.130e-13 Identity = 43/119 (36.13%), Postives = 66/119 (55.46%), Query Frame = 1
Query: 1 VLAVWLPLSMGFDVLFVDDDLVWWRSIEHLL--ATGDAADADIVMQDDGSRRHDFAPGFGNTGKGSKLPVCLYLVRHNPRSLYFMRTMLQSYDSIVNRATHQGVFDTLLDEHVVNTGLK 351
VL+V + +G+D+LF D D+VW++ L + D A+ DI+ QDDG+R +AP N+G Y VRHN R++Y +++ D I+ +HQ V +LL EH GL+
Sbjct: 426 VLSVQMVNFLGYDLLFQDVDMVWYKDPLDLFHDKSNDLAEYDILFQDDGARSQRYAPYSANSG--------FYYVRHNARTVYLFTSLMYHGDMIIQSGSHQQVLISLLTEHASLFGLR 536
BLAST of mRNA_P-wetherbeei_contig560.5.1 vs. uniprot
Match: A0A8J2WSU3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WSU3_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 3.750e-13 Identity = 41/107 (38.32%), Postives = 56/107 (52.34%), Query Frame = 1
Query: 7 AVWLPLSMGFDVLFVDDDLVWWRSIEHLLATGDAADADIVMQDDGSRRHDFAPGFGNTGKGSKLPVCLYLVRHNPRSLYFMRTMLQSYDSIVNRATHQGVFDTLLDE 327
V+L ++G+D+LF D DL WWR AT D D DDG+R FAP + NTG YL+RHNPR+ T++ YD ++ +HQ V +L E
Sbjct: 304 CVYLVNALGYDLLFQDADLYWWREPWSFFAT--RPDIDTFWMDDGARTSRFAPLYPNTG--------YYLIRHNPRTALLCETLVGMYDVVLAWQSHQAVVSQVLGE 400
BLAST of mRNA_P-wetherbeei_contig560.5.1 vs. uniprot
Match: A0A7R9WVE0_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WVE0_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 4.450e-13 Identity = 43/118 (36.44%), Postives = 64/118 (54.24%), Query Frame = 1
Query: 1 VLAVWLPLSMGFDVLFVDDDLVWWRS-IEHLLATGDAADADIVMQDDGSRRHDFAPGFGNTGKGSKLPVCLYLVRHNPRSLYFMRTMLQSYDSIVNRATHQGVFDTLLDEHVVNTGLK 351
V V + +G+DVLF D DLVW+++ +E+ + D DI QDDG+ +AP NTG Y VR+N R+ YF ++L + D I++ +HQ LL+EH GL+
Sbjct: 7 VYCVQMVNMLGYDVLFQDVDLVWYKNPLEYFYNHDNYPDFDIYFQDDGNHALFYAPYSANTG--------FYYVRYNDRTQYFFNSLLLAGDLILSTHSHQNALIALLNEHASMYGLR 116
BLAST of mRNA_P-wetherbeei_contig560.5.1 vs. uniprot
Match: A0A1E7EJP1_9STRA (Nucleotid_trans domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EJP1_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 4.500e-12 Identity = 42/123 (34.15%), Postives = 65/123 (52.85%), Query Frame = 1
Query: 1 VLAVWLPLSMGFDVLFVDDDLVWWRSIEHLLATGDAADADIVMQDDGSRRHDFAPGFGNTGKGSKLPVCLYLVRHNPRSLYFMRTMLQSYDSIVNRATHQGVFDTLLDEHVVNTGLKSVTLHE 369
V V L +S+G+DVLF D D++W ++ L T ++ + D++ QDDGSR+ + P NTG Y VR+ P ++YF ++L+ D I +HQ LL E GL+ H+
Sbjct: 276 VYCVHLVMSLGYDVLFQDVDVIWNQNPLEYLTTKESKEWDMMFQDDGSRQARYNPYSPNTG--------FYFVRNTPLTMYFFGSLLRMGDLISATKSHQAALSALLAEFAGWKGLRVKVWHK 390
BLAST of mRNA_P-wetherbeei_contig560.5.1 vs. uniprot
Match: A0A1Z5KS91_FISSO (Nucleotid_trans domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KS91_FISSO) HSP 1 Score: 70.9 bits (172), Expect = 8.600e-12 Identity = 46/128 (35.94%), Postives = 63/128 (49.22%), Query Frame = 1
Query: 1 VLAVWLPLSMGFDVLFVDDDLVWWRS-IEHLLATG--DAADADIVMQDDGSRRHDFAPGFGNTGKGSKLPVCLYLVRHNPRSLYFMRTMLQSYDSIVNRATHQGVFDTLLDEHVVNTGLKSVTLHEDD 375
V V L +G+D+LF D D+VW+++ +E+ A D D+ QDDG+R +AP NTG Y VRHN R+ Y L+ D I +HQ TLL + + GLK L DD
Sbjct: 348 VYCVQLINMLGYDLLFQDVDIVWYKNPLEYFHADNIPTIGDFDLYFQDDGARSSRYAPYSPNTG--------FYFVRHNARTEYLFSVFLRMGDVIQQSGSHQSALTTLLADFASDRGLKVKVLGRDD 467
BLAST of mRNA_P-wetherbeei_contig560.5.1 vs. uniprot
Match: A0A7S4AKP5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AKP5_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 8.630e-12 Identity = 40/117 (34.19%), Postives = 62/117 (52.99%), Query Frame = 1
Query: 1 VLAVWLPLSMGFDVLFVDDDLVWWRSIEHLLATGDAADADIVMQDDGSRRHDFAPGFGNTGKGSKLPVCLYLVRHNPRSLYFMRTMLQSYDSIVNRATHQGVFDTLLDEHVVNTGLK 351
V V L +S+G+DVLF D D+VW + L T ++ + D++ QDDGSR+ + P NTG Y VR+N + YF ++++ D + +HQ L+ E V GL+
Sbjct: 376 VYCVHLIISLGYDVLFQDVDVVWHENPLEYLETEESKEWDMIFQDDGSRQVRYQPYSPNTG--------FYFVRNNELTTYFFNSLVKMGDLVTKSKSHQAALTALMAEFVSWKGLR 484
BLAST of mRNA_P-wetherbeei_contig560.5.1 vs. uniprot
Match: A0A7S0CD54_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CD54_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 9.800e-12 Identity = 42/122 (34.43%), Postives = 66/122 (54.10%), Query Frame = 1
Query: 1 VLAVWLPLSMGFDVLFVDDDLVWWRSIEHLLATGDA-ADADIVMQDDGSRRHDFAPGFGNTGKGSKLPVCLYLVRHNPRSLYFMRTMLQSYDSIVNRATHQGVFDTLLDEHVVNTGLKSVTL 363
V++V L +G+D+LF+D D+VW++ + + ++ A DI+ QDDG+R +AP N+G Y VRHN R+ + +L S + I+ +HQ L+EH GLK TL
Sbjct: 147 VISVALINLLGYDLLFMDVDIVWYKEPLNFFHSDESVAQYDIMFQDDGARSIRYAPYSANSG--------FYYVRHNERTTHLFTRLLNSGELIIESKSHQQALGIFLEEHSSLYGLKVKTL 260 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig560.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig560.5.1 >prot_P-wetherbeei_contig560.5.1 ID=prot_P-wetherbeei_contig560.5.1|Name=mRNA_P-wetherbeei_contig560.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=116bp MGFDVLFVDDDLVWWRSIEHLLATGDAADADIVMQDDGSRRHDFAPGFGNback to top mRNA from alignment at P-wetherbeei_contig560:8379..9158- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig560.5.1 ID=mRNA_P-wetherbeei_contig560.5.1|Name=mRNA_P-wetherbeei_contig560.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=780bp|location=Sequence derived from alignment at P-wetherbeei_contig560:8379..9158- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig560:8379..9158- >mRNA_P-wetherbeei_contig560.5.1 ID=mRNA_P-wetherbeei_contig560.5.1|Name=mRNA_P-wetherbeei_contig560.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=348bp|location=Sequence derived from alignment at P-wetherbeei_contig560:8379..9158- (Phaeothamnion wetherbeei SAG_119_79)back to top |