mRNA_P-wetherbeei_contig56.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig56.3.1 vs. uniprot
Match: A0A6H5KFV9_9PHAE (Lipid_desat domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFV9_9PHAE) HSP 1 Score: 251 bits (641), Expect = 8.810e-79 Identity = 127/234 (54.27%), Postives = 161/234 (68.80%), Query Frame = 1
Query: 1 KAPKLVITGDTIEEEPHMVVTVVATFALATFVLLRAAVEASTPLMGFESVAAAIGGLLFADFFTGIFHFLVDNYGNGSTPVFGSVIEAFQGHHDSPWTITSRGFANNVHKICYGVLPLLALVALVGPGPVTSSSAVAFLVASVMSQELHKFSHMISPPAPVRALQDAGVILSRRAHGQHHSSPFQDHYCIVTGHCNEFMDKSGIFRLLENIIYKATGVESNTWKLDHNIKNQAL 702
KAP++V+ GD + P M+V V ++ AL LL+A ++PL + A A G AD +G+FH+ VDNYG+ STPVFG+VIEAFQGHH SPWTIT R F NNVHKI Y VLPLLAL+ LV PGP + V FLV S+MS E H+F+HM SPP VRALQ GV +SR+ HG+HHSSPF++ YCIVTG CN +D +FR +E ++Y+ GVE WKLD ++K AL
Sbjct: 149 KAPEVVVEGDLLGNTPKMIVLVWSSLALNAIYLLQALSTVTSPLEALWTAAGAFVGYTIADLVSGVFHWSVDNYGDDSTPVFGAVIEAFQGHHGSPWTITYRPFENNVHKIAYAVLPLLALLRLVNPGPAGVALGVTFLVGSLMSNEFHRFAHMTSPPPLVRALQKFGVTVSRKEHGRHHSSPFEEKYCIVTGICNGPLDHFRVFRFMERVVYELNGVEPIAWKLDPSVKEVAL 382
BLAST of mRNA_P-wetherbeei_contig56.3.1 vs. uniprot
Match: A0A835ZEB7_9STRA (Kua-ubiquitin conjugating enzyme hybrid localization domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEB7_9STRA) HSP 1 Score: 248 bits (633), Expect = 1.090e-78 Identity = 124/230 (53.91%), Postives = 157/230 (68.26%), Query Frame = 1
Query: 1 KAPKLVITGDTIEEEPHMVVTVVATFALATF----VLLRAAVEASTPLMGFESVAAAIGGLLFADFFTGIFHFLVDNYGNGSTPVFGSVIEAFQGHHDSPWTITSRGFANNVHKICYGVLPLLALVALVGPGPVTSSSAVAFLVASVMSQELHKFSHMISPPAPVRALQDAGVILSRRAHGQHHSSPFQDHYCIVTGHCNEFMDKSGIFRLLENIIYKATGVESNTWKLD 678
+A KLVI DT+ +EP+M+ V AT +A V+ VAA + G+LF+D FTG+FH+ VDNYGN TPV G VI AFQGHH+SPWTIT R FANNVHK+ YGVLPLL L+AL PGP + V+ L+ +M QELHK+SHM+ PP V LQ +G+ILS++ HG HH+SPF+ YCIVTGHCNE MD + ++R LE ++Y+ TGVE N WKLD
Sbjct: 72 EAAKLVIDSDTLTDEPYMIAIVAATVVMAAAMTSGVIGAXXXXXXXXXXXXXXVAATVAGILFSDAFTGVFHWSVDNYGNLQTPVLGPVIAAFQGHHESPWTITYRNFANNVHKVAYGVLPLLGLLALSHPGPAGTMFGVSALMGLLMCQELHKYSHMVRPPQWVARLQQSGIILSKKEHGLHHTSPFEGKYCIVTGHCNEIMDSTNLYRHLERVVYERTGVEPNCWKLD 301
BLAST of mRNA_P-wetherbeei_contig56.3.1 vs. uniprot
Match: D7G5G4_ECTSI (Lipid_desat domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G4_ECTSI) HSP 1 Score: 237 bits (605), Expect = 1.540e-75 Identity = 120/217 (55.30%), Postives = 150/217 (69.12%), Query Frame = 1
Query: 52 MVVTVVATFALATFVLLRAAVEASTPLMGFESVAAAIGGLLFADFFTGIFHFLVDNYGNGSTPVFGSVIEAFQGHHDSPWTITSRGFANNVHKICYGVLPLLALVALVGPGPVTSSSAVAFLVASVMSQELHKFSHMISPPAPVRALQDAGVILSRRAHGQHHSSPFQDHYCIVTGHCNEFMDKSGIFRLLENIIYKATGVESNTWKLDHNIKNQAL 702
M+ V ++ AL L+A ++PL + A A G AD +G+FH+ VDNYG+GSTPVFG+VIEAFQGHH SPWTIT R F NNVHKI Y VLPLLAL+ LV PGP + VAFLV S+MS E H+F+HM SPP VRALQ GV +SR+ HG+HHSSPF++ YCIVTG CN +D +FR +E ++Y+ GVE WKLD ++K AL
Sbjct: 1 MIALVWSSLALNAIYFLQALSTVTSPLEALWTAAGAFVGYTIADLVSGVFHWSVDNYGDGSTPVFGAVIEAFQGHHGSPWTITYRPFENNVHKIAYAVLPLLALLRLVNPGPAGVALGVAFLVGSLMSNEFHRFAHMTSPPPIVRALQKFGVTVSRKEHGRHHSSPFEEKYCIVTGVCNGPLDHFRVFRFMERVVYELNGVEPIAWKLDPSVKEVAL 217
BLAST of mRNA_P-wetherbeei_contig56.3.1 vs. uniprot
Match: A0A0G4GQ94_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GQ94_9ALVE) HSP 1 Score: 227 bits (578), Expect = 6.600e-70 Identity = 117/241 (48.55%), Postives = 155/241 (64.32%), Query Frame = 1
Query: 1 KAPKLVITGDTIEEEPHMVVTVVATFALATFVLLRAAVEASTPLMGFESVAAAIG---GLLFADFFTGIFHFLVDNYGNGSTPVFGSVIEAFQGHHDSPWTITSRGFANNVHKICYGVLPLLAL-VALVGPGPVTSSSAVAFLVASVMSQELHKFSHMISPPAPVRALQDAGVILSRRAHGQHHSSPFQDHYCIVTGHCNEFMDKSGIFRLLENIIYKATGVESNTWKLDHNIKNQALRMM 711
KAP LV+ GD+++ P V +T LA F L ++A+ S+ + A+G L+F DFF+G+FH++ DNYGNGSTPVFG VIE FQGHH +PWTIT R F NN KICY ++AL L+G P + F V+ +QE HK+SHM +PPA VR LQDAG+ILSR+ HGQHH+SPF+ HYCI+ G CN +D G FR LE + G E N+WKLD +++ + R+M
Sbjct: 107 KAPVLVVEGDSVKSTPWQKGVVWSTLLLALFSLTKSAISVSSAQSLAGGLDIALGFLCALVFGDFFSGLFHWVADNYGNGSTPVFGGVIEGFQGHHKAPWTITYRDFENNTFKICYAAGAIVALSFLLLGGSPFWQTFWTVFAVSQAFAQEFHKYSHMTNPPALVRRLQDAGLILSRKEHGQHHNSPFEGHYCILFGFCNRPLDSIGFFRFLERRVVALGGHEPNSWKLDESLREEQKRIM 347
BLAST of mRNA_P-wetherbeei_contig56.3.1 vs. uniprot
Match: A0A6S9FHC8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FHC8_HETAK) HSP 1 Score: 220 bits (561), Expect = 6.820e-68 Identity = 115/236 (48.73%), Postives = 160/236 (67.80%), Query Frame = 1
Query: 7 PKLVITGDTIEEEPHMVVTVVATFALATFVLLRAAVEA-STPLMGFESVAAAIGGLLFADFFTGIFHFLVDNYGNGSTPVFGSVIEAFQGHHDSPWTITSRGFANNVHKICYGVLPLLALVALVGPGPVTSSS-AVAFLVASVMSQELHKFSHMISPPAPVRALQDAGVILSRRAHGQHHSSPFQDHYCIVTGHCNEFMDKSGIFRLLENIIYKATGVESNTWKLDHNIKNQALRM 708
P+L I GD++E+ P + + + A F + F L+ + + A TP A + +F+DFF+G+FH+ VDNYGNG TP+ GSVIEAFQGHH +PWTIT R FANNVHKIC +P+ AL+A P + + V +L V+SQE HK SHM++PPA + LQ+ VI+SR+ HG HHSSPF+ +YCI+TG CN+ +D+S +FR LE ++Y+ GVE N WKLD +K +AL +
Sbjct: 75 PELAIEGDSLEDSP-VTIGITAAFWVLAFSLIGSYIMAIQTPAEAITMGATFLFSTVFSDFFSGVFHWSVDNYGNGKTPLLGSVIEAFQGHHSAPWTITYRPFANNVHKICKVAIPI-ALIANALPLALPAKLFTVLWLCFQVLSQEFHKLSHMVNPPAWAQVLQEKNVIISRKVHGLHHSSPFEGNYCILTGWCNQALDQSRLFRGLEKLVYEWNGVEPNCWKLDPKVKAEALAL 308
BLAST of mRNA_P-wetherbeei_contig56.3.1 vs. uniprot
Match: A0A7S2W8D5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8D5_9STRA) HSP 1 Score: 212 bits (540), Expect = 2.060e-64 Identity = 108/237 (45.57%), Postives = 151/237 (63.71%), Query Frame = 1
Query: 4 APKLVITGDTIEEEPHMVVTVVATFALATFVLLRAAVE----ASTPLMGFESVAAAIGGLLFADFFTGIFHFLVDNYGNGSTPVFGSVIEAFQGHHDSPWTITSRGFANNVHKICYGVLPLLALVALVGPGPVTSSSAVAFLVASVMSQELHKFSHMISPPAPVRALQDAGVILSRRAHGQHHSSPFQDHYCIVTGHCNEFMDKSGIFRLLENIIYKATGVESNTWKLDHNIKNQAL 702
+P LV+ GDT+E P V V + + L +F+ L+ ++ + +P A+A+ ++F+D F+G+FH++ DNYGNG TP+ G VIEAFQGHH +PWTIT R F NNVHKI +PL LV ++ P V F A ++SQE HK SH ++PP LQ VILSR+ HG HHSSPF+ HYCI+TG CN+ +D+ ++R LE I+Y+ GVE N WK D ++K +L
Sbjct: 93 SPVLVLGGDTLETRPKHVALVTSAW-LVSFIALKPVLDLWMSSPSPEQLVSVSASALASMIFSDLFSGLFHWVADNYGNGRTPILGGVIEAFQGHHVNPWTITHRSFFNNVHKIAQAAIPLTLLVCVLTTSPEARLFWVIFFNAQILSQEFHKLSHTVNPPPWASWLQARNVILSRKEHGLHHSSPFESHYCILTGMCNKPLDRFNVWRRLEAIVYRVNGVEPNCWKEDPSLKKFSL 328
BLAST of mRNA_P-wetherbeei_contig56.3.1 vs. uniprot
Match: A0A0G4F217_VITBC (Lipid_desat domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F217_VITBC) HSP 1 Score: 211 bits (536), Expect = 1.290e-63 Identity = 111/238 (46.64%), Postives = 150/238 (63.03%), Query Frame = 1
Query: 1 KAPKLVITGDTIEEEPHMVVTVVATFALATFVLLRAAV-EASTPLMGFESVAAAIGGLLFADFFTGIFHFLVDNYGNGSTPVFGSVIEAFQGHHDSPWTITSRGFANNVHKICYGVLPLLALVALVGPGPVTSSSAVAFLVASVMSQELHKFSHMISPPAPVRALQDAGVILSRRAHGQHHSSPFQDHYCIVTGHCNEFMDKSGIFRLLENIIYKATGVESNTWKLDHNIKNQALRMM 711
K P+L++ GD+ + P+ + T ALA + +A V +AS P + V A LLF D F+G+FH+ VDNYGN +TPVFGSVIE FQGHH PWTIT R FANNV+KICYGVL ++A ++ P F ++ VM+QE HK+SHM PP V+ LQ G++L R+ HG HHS PF+ HY I+ G N +D S +FRL+E IYK G N+WKLD ++ + + M+
Sbjct: 110 KDPQLIVEGDSTQVTPYQQLVTYGTLALALAAIAQALVSDASNPALMSLMVPFA---LLFGDLFSGVFHWAVDNYGNKNTPVFGSVIEGFQGHHKYPWTITYRPFANNVYKICYGVLLIMATTFILQAPPAVRVFMTVFGLSQVMAQEFHKYSHMTKPPIIVQRLQGMGLMLPRKEHGLHHSEPFEGHYSILFGWFNPLLDHSQVFRLMERAIYKWNGHMPNSWKLDERLRQEQVDMI 344
BLAST of mRNA_P-wetherbeei_contig56.3.1 vs. uniprot
Match: K8YWU6_NANGC (Lipid_desat domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YWU6_NANGC) HSP 1 Score: 206 bits (525), Expect = 3.500e-63 Identity = 100/169 (59.17%), Postives = 123/169 (72.78%), Query Frame = 1
Query: 169 LLFADFFTGIFHFLVDNYGNGSTPVFGSVIEAFQGHHDSPWTITSRGFANNVHKICYGVLP-LLALVALVGPGPVTSSSAVAFLVASVMSQELHKFSHMISPPAPVRALQDAGVILSRRAHGQHHSSPFQDHYCIVTGHCNEFMDKSGIFRLLENIIYKATGVESNTWK 672
+LF+DFF+GIFH+ VDNYGNG TPV G+VIEAFQGHHD+PWTIT R F+NNVHKI +P +LA+VAL P+ + A F V+SQE HK SH+ PPA LQD G+I+SR+ HGQHHSSPF+ +YCI+TG CN +D+SG FR LE +Y TGV N WK
Sbjct: 58 VLFSDFFSGIFHWSVDNYGNGKTPVLGTVIEAFQGHHDAPWTITYRQFSNNVHKITKITIPAMLAVVALHPSSPLVTLFATLFFNLQVLSQEFHKLSHLSKPPAWAVRLQDLGLIISRKEHGQHHSSPFESNYCILTGTCNRMLDESGFFRFLEKAVYDVTGVMPNCWK 226
BLAST of mRNA_P-wetherbeei_contig56.3.1 vs. uniprot
Match: W7U0R7_9STRA (Kua-ubiquitin conjugating enzyme hybrid, localization n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0R7_9STRA) HSP 1 Score: 207 bits (526), Expect = 6.360e-62 Identity = 113/231 (48.92%), Postives = 144/231 (62.34%), Query Frame = 1
Query: 7 PKLVITGDTIEEE--------PHMVVTVVATFALATFVLLRAAVEASTPLMGFESVAAAIGGLLFADFFTGIFHFLVDNYGNGSTPVFGSVIEAFQGHHDSPWTITSRGFANNVHKICYGVLP-LLALVALVGPGPVTSSSAVAFLVASVMSQELHKFSHMISPPAPVRALQDAGVILSRRAHGQHHSSPFQDHYCIVTGHCNEFMDKSGIFRLLENIIYKATGVESNTWK 672
P +V GD +E H +VT+ A +A+ V M + A ++ LF+DFF+GIFH+ VDNYGNG TPV G+VIEAFQGHHD+PWTIT R F+NNVHKI +P +LA+VAL P+ + A F V+SQE HK SH+ PPA LQD G+I+SR+ HGQHHSSPF+ +YCI+TG CN +D+SG FR LE +Y TGV N WK
Sbjct: 111 PVMVADGDVLESSWIHRSYVATHYLVTLAAMQQVASTYAGNGGVTPGDLTMLAATTAFSV---LFSDFFSGIFHWSVDNYGNGKTPVLGTVIEAFQGHHDAPWTITYRQFSNNVHKITKITIPAMLAIVALHPSSPLVTLFATLFFNLQVLSQEFHKLSHLSKPPAWAVRLQDLGLIISRKEHGQHHSSPFESNYCILTGTCNRMLDESGFFRFLEKAVYDVTGVMPNCWK 338
BLAST of mRNA_P-wetherbeei_contig56.3.1 vs. uniprot
Match: A0A7S2K3J7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K3J7_9STRA) HSP 1 Score: 204 bits (519), Expect = 4.250e-61 Identity = 111/249 (44.58%), Postives = 151/249 (60.64%), Query Frame = 1
Query: 1 KAPKLVITGDTIEEEPHMVVTVVATFALATFVLLRAAVEA-----------STPLMGFESVAAAIGGLLFADFFTGIFHFLVDNYGNGSTPVFGSVIEAFQGHHDSPWTITSRGFANNVHKIC--YGVLPLLALVALVGPGPVTSSSAVAFLVASVMSQELHKFSHMISPPAP--VRALQDAGVILSRRAHGQHHSSPFQDHYCIVTGHCNEFMDKSGIFRLLENIIYKATGVESNTWKLDHNIKNQAL 702
K ++V+ GD++E +P V V AT + AA A STPL ES A + + AD +GI H+ VDNYGNGSTPV G++I AFQGHH +PWTIT RGF NNV+K+C +G+ +LAL L G P+ S F ++SQELHK+SHM P V +QDAG+ + R H HH +P++ +YCIV+G CN +D+SG FR LE+++Y GVESN+WKLD ++ + L
Sbjct: 99 KEARVVVEGDSLETQPWQVALVSATM------MFHAAFSAYNVHEVIGQTHSTPLGLTESAVAIVSSWVMADLGSGILHWSVDNYGNGSTPVMGNIIAAFQGHHSAPWTITERGFCNNVYKLCTPFGIPTVLALSYLTGFAPLPSLFVAVFCAMEILSQELHKWSHMTKKEVPGWVNWMQDAGLSIPRTDHANHHKAPYEGNYCIVSGVCNPALDQSGFFRRLEHLVYNINGVESNSWKLDGALRAKTL 341 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig56.3.1 >prot_P-wetherbeei_contig56.3.1 ID=prot_P-wetherbeei_contig56.3.1|Name=mRNA_P-wetherbeei_contig56.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=238bp KAPKLVITGDTIEEEPHMVVTVVATFALATFVLLRAAVEASTPLMGFESVback to top mRNA from alignment at P-wetherbeei_contig56:4957..6127- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig56.3.1 ID=mRNA_P-wetherbeei_contig56.3.1|Name=mRNA_P-wetherbeei_contig56.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1171bp|location=Sequence derived from alignment at P-wetherbeei_contig56:4957..6127- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig56:4957..6127- >mRNA_P-wetherbeei_contig56.3.1 ID=mRNA_P-wetherbeei_contig56.3.1|Name=mRNA_P-wetherbeei_contig56.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=714bp|location=Sequence derived from alignment at P-wetherbeei_contig56:4957..6127- (Phaeothamnion wetherbeei SAG_119_79)back to top |