mRNA_P-wetherbeei_contig5597.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5597.1.1
Unique NamemRNA_P-wetherbeei_contig5597.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5597.1.1 vs. uniprot
Match: D7FJ40_ECTSI (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ40_ECTSI)

HSP 1 Score: 529 bits (1363), Expect = 1.970e-187
Identity = 262/304 (86.18%), Postives = 283/304 (93.09%), Query Frame = 1
Query:  166 RSMSSTAKVWIDKNTKVIVQGFTGKQGTFHAEQAIAYGTQVVGGVTPKKGGQTHLGAPVFNTVADATAAVNPDASVIYVPPPFAASAIIDAMKAEIPLVVCITEGIPQLDMVKVKYHLRQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVAGFGQSTCVGIGGDPFNGTNFIDCLERFTADPETEGIIMIGEIGGQAEEDASEWLMEHGDPNKPVVGFIAGATAPPGRRMGHAGAIVSGGKGTAAAKFSALEAAGVYVSRSPAHLGSTMLAAFEERGLSV 1077
            R MSS+AKVWID+NTKVIVQGFTGKQGTFHAEQAI YG+Q VGGVTPKKGGQTHLG PVFNTVA+A   V PDASV+YVPPPFA +A++DA++ EIPLVVCITEGIPQ DM KVK+ LRQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTV G GQSTCVGIGGDPFNGTNFIDCLERFT DPETEGI+MIGEIGGQAEEDA+EWLMEHGDP KPVV FIAG+TAPPGRRMGHAGAI+SGGKGTAAAKF+ALE AGVY+SRSPA LGSTM+ AFEERG+++
Sbjct:   19 RCMSSSAKVWIDQNTKVIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQTHLGKPVFNTVAEAKEGVKPDASVVYVPPPFAGAAVLDAIENEIPLVVCITEGIPQKDMAKVKHALRQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGIGGDPFNGTNFIDCLERFTKDPETEGIVMIGEIGGQAEEDAAEWLMEHGDPAKPVVSFIAGSTAPPGRRMGHAGAIISGGKGTAAAKFAALEDAGVYISRSPAQLGSTMVRAFEERGMTI 322          
BLAST of mRNA_P-wetherbeei_contig5597.1.1 vs. uniprot
Match: F0YDA5_AURAN (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDA5_AURAN)

HSP 1 Score: 502 bits (1293), Expect = 5.760e-177
Identity = 250/304 (82.24%), Postives = 275/304 (90.46%), Query Frame = 1
Query:  166 RSMSSTAKVWIDKNTKVIVQGFTGKQGTFHAEQAIAYGTQVVGGVTPKKGGQTHLGAPVFNTVADATAAVNPDASVIYVPPPFAASAIIDAMKAEIPLVVCITEGIPQLDMVKVKYHLRQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVAGFGQSTCVGIGGDPFNGTNFIDCLERFTADPETEGIIMIGEIGGQAEEDASEWLMEHGDPNKPVVGFIAGATAPPGRRMGHAGAIVSGGKGTAAAKFSALEAAGVYVSRSPAHLGSTMLAAFEERGLSV 1077
            RS S++AKVWI+K TKVI QGFTGKQGTFH+EQA+AYGT VVGGVTPKKGGQ HLG PVF+TV DA  AVNPDAS+IYVPPPF  +AI+DA++AEIPLVV ITEG+PQ DMV+VKYHL +Q+ATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIG+VSRSGTLTYEAV QTTV G GQSTCVGIGGDPFNGTNFIDCLERFT DPETEGIIMIGEIGG AEE+A+EWL  HGDP+KPVVGFIAG TAPPGRRMGHAGAIVSGGKGTAAAKF+A E AGV++SRSPA LGSTM+ AF+E G  +
Sbjct:    3 RSFSASAKVWINKETKVICQGFTGKQGTFHSEQALAYGTNVVGGVTPKKGGQEHLGLPVFDTVMDAKKAVNPDASMIYVPPPFCKAAIMDAIEAEIPLVVAITEGVPQQDMVEVKYHLTRQSATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGVVSRSGTLTYEAVHQTTVTGLGQSTCVGIGGDPFNGTNFIDCLERFTNDPETEGIIMIGEIGGSAEEEAAEWLKAHGDPDKPVVGFIAGTTAPPGRRMGHAGAIVSGGKGTAAAKFAAFEDAGVFISRSPAQLGSTMIQAFKEHGKEI 306          
BLAST of mRNA_P-wetherbeei_contig5597.1.1 vs. uniprot
Match: A0A7R9ZLR7_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZLR7_9STRA)

HSP 1 Score: 491 bits (1263), Expect = 3.920e-172
Identity = 253/310 (81.61%), Postives = 275/310 (88.71%), Query Frame = 1
Query:  124 VASAMGRCARTAPRRSMSSTAKVWIDKNTKVIVQGFTGKQGTFHAEQAIAYGTQVVGGVTPKKGGQTHLGAPVFNTVADATAAVNPDASVIYVPPPFAASAIIDAMKAEIPLVVCITEGIPQLDMVKVKYHLRQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVAGFGQSTCVGIGGDPFNGTNFIDCLERFTADPETEGIIMIGEIGGQAEEDASEWLMEHGDPNKPVVGFIAGATAPPGRRMGHAGAIVSGGKGTAAAKFSALEAAGVYVSRSPAHLGSTMLAA 1053
            V+S +GR A  A RRSMSSTAKVWIDK+T+VI QGFTGKQGTFH+EQAI YGT +VGGVTPKKGGQTHLG PVFNTV +A   V PDASVIYVPPPF A AI+DA++AEIPLVV ITEG+PQ +M +VK+ L  QTATRLIGPNCPGIIKPGECKIGIMPGYIH+KGKIG+VSRSGTLTYEAV QTTVAG GQSTCVGIGGDPFNGTNFIDCLERFT DPETEGIIMIGEIGG AEE+A+EW+ E+GDPNKPVVGFIAG TAPPGRRMGHAGAIV+GGKG AA KF ALE AGV+VSRSPA LG TML A
Sbjct:    8 VSSLVGRQAA-AGRRSMSSTAKVWIDKDTRVICQGFTGKQGTFHSEQAIEYGTNMVGGVTPKKGGQTHLGLPVFNTVEEAKTEVKPDASVIYVPPPFCAQAIMDAIEAEIPLVVAITEGVPQQEMARVKHALNTQTATRLIGPNCPGIIKPGECKIGIMPGYIHQKGKIGVVSRSGTLTYEAVHQTTVAGLGQSTCVGIGGDPFNGTNFIDCLERFTNDPETEGIIMIGEIGGSAEEEAAEWIKEYGDPNKPVVGFIAGMTAPPGRRMGHAGAIVAGGKGGAAEKFDALERAGVHVSRSPARLGVTMLEA 316          
BLAST of mRNA_P-wetherbeei_contig5597.1.1 vs. uniprot
Match: A0A1E7FEJ7_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=3 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FEJ7_9STRA)

HSP 1 Score: 488 bits (1257), Expect = 2.580e-171
Identity = 250/319 (78.37%), Postives = 279/319 (87.46%), Query Frame = 1
Query:   97 SKMAASLSTVASAMGRCARTAPRRSMSSTAKVWIDKNTKVIVQGFTGKQGTFHAEQAIAYGTQVVGGVTPKKGGQTHLGAPVFNTVADATAAVNPDASVIYVPPPFAASAIIDAMKAEIPLVVCITEGIPQLDMVKVKYHLRQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVAGFGQSTCVGIGGDPFNGTNFIDCLERFTADPETEGIIMIGEIGGQAEEDASEWLMEHGDPNKPVVGFIAGATAPPGRRMGHAGAIVSGGKGTAAAKFSALEAAGVYVSRSPAHLGSTMLAA 1053
            +K +A  S +A+A+    R +  RSMSSTAKVW+DKNT+VI QGFTGKQGTFH+ QAI YGT +VGGVTP KGGQ HLG PVFNTVA+A   + PDASVIYVPPPF A+AI+DA++AEIPLVV ITEG+PQ DM +VKY LRQQ+ATRLIGPNCPGIIKPGECKIGIMPGYIH KGKIG+VSRSGTLTYEAV QTT+AG GQST VGIGGDPFNGTNFIDCLERFT DPETEGIIMIGEIGG AEE+A+EWL E+GDPNKPVVGFIAG TAPPGRRMGHAGAIV+GGKG AA KF ALE+AGV++SRSPA LG+TML A
Sbjct:    2 NKSSAFASKIATAVS---RPSASRSMSSTAKVWVDKNTRVICQGFTGKQGTFHSTQAIEYGTNMVGGVTPNKGGQEHLGLPVFNTVAEAVDELKPDASVIYVPPPFCAAAIMDAIEAEIPLVVAITEGVPQQDMARVKYALRQQSATRLIGPNCPGIIKPGECKIGIMPGYIHTKGKIGVVSRSGTLTYEAVHQTTIAGLGQSTVVGIGGDPFNGTNFIDCLERFTNDPETEGIIMIGEIGGNAEEEAAEWLKEYGDPNKPVVGFIAGTTAPPGRRMGHAGAIVAGGKGGAAEKFEALESAGVHISRSPAQLGNTMLKA 317          
BLAST of mRNA_P-wetherbeei_contig5597.1.1 vs. uniprot
Match: A0A7S0AIP9_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=2 Tax=Mediophyceae TaxID=589449 RepID=A0A7S0AIP9_9STRA)

HSP 1 Score: 488 bits (1255), Expect = 9.600e-171
Identity = 247/307 (80.46%), Postives = 269/307 (87.62%), Query Frame = 1
Query:  148 ARTAPRRSMSSTAKVWIDKNTKVIVQGFTGKQGTFHAEQAIAYGTQVVGGVTPKKGGQTHLGAPVFNTVADATAAVNPDASVIYVPPPFAASAIIDAMKAEIPLVVCITEGIPQLDMVKVKYHLRQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVAGFGQSTCVGIGGDPFNGTNFIDCLERFTADPETEGIIMIGEIGGQAEEDASEWLMEHGDPNKPVVGFIAGATAPPGRRMGHAGAIVSGGKGTAAAKFSALEAAGVYVSRSPAHLGSTMLAAFEERG 1068
            A +A RR MSSTA VW+DKNTKVI QGFTGKQGTFH+ QAI YGT +VGGVTPKKGGQTHLG PVFNTVA+A   V PDASVIYVPPPF A+AI+DA++ EIPLVV ITEG+PQ DM KVK  L  Q+ATRLIGPNCPGIIKPGECKIGIMPGYIH  GKIG+VSRSGTLTYEAV QTTV G GQSTCVGIGGDPFNGT+FIDCLERFT DP+TEGIIMIGEIGG AEEDA+EWL EHGDPNKPVV FIAG TAPPGRRMGHAGAI++GGKG AA KF+ALEAAGV+V+RSPA LG+TML A +E G
Sbjct:   30 ATSASRRCMSSTANVWVDKNTKVICQGFTGKQGTFHSTQAIEYGTNMVGGVTPKKGGQTHLGLPVFNTVAEAVDGVQPDASVIYVPPPFCAAAIMDAIENEIPLVVAITEGVPQQDMAKVKKALSMQSATRLIGPNCPGIIKPGECKIGIMPGYIHTPGKIGVVSRSGTLTYEAVHQTTVTGLGQSTCVGIGGDPFNGTDFIDCLERFTNDPQTEGIIMIGEIGGSAEEDAAEWLKEHGDPNKPVVSFIAGMTAPPGRRMGHAGAIIAGGKGGAADKFAALEAAGVHVTRSPAQLGNTMLKAMQEAG 336          
BLAST of mRNA_P-wetherbeei_contig5597.1.1 vs. uniprot
Match: A0A8J2SSG9_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SSG9_9STRA)

HSP 1 Score: 486 bits (1250), Expect = 2.790e-170
Identity = 242/315 (76.83%), Postives = 275/315 (87.30%), Query Frame = 1
Query:  133 AMGRCARTAPRRSMSSTAKVWIDKNTKVIVQGFTGKQGTFHAEQAIAYGTQVVGGVTPKKGGQTHLGAPVFNTVADATAAVNPDASVIYVPPPFAASAIIDAMKAEIPLVVCITEGIPQLDMVKVKYHLRQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVAGFGQSTCVGIGGDPFNGTNFIDCLERFTADPETEGIIMIGEIGGQAEEDASEWLMEHGDPNKPVVGFIAGATAPPGRRMGHAGAIVSGGKGTAAAKFSALEAAGVYVSRSPAHLGSTMLAAFEERGLSV 1077
            A+ R A     R +S+TAKVW+D NT+VI QGFTGK G+FH+EQAIAYGT +VGGVTPKKGGQTHLG PVF++V +A   V PDASVIYVPPPF  +AI+DA++ EI LVV ITEG+PQ DMV+VKYHL +Q+ATRLIGPNCPGIIKPGECKIGIMPGYIH KGKIG+VSRSGTLTYEAV QTTVAG GQSTCVGIGGDPFNGTNFIDCLERFT DPETEGIIMIGEIGG AEE+A+EWL ++GDP+KPVVGF+AG TAPPGRRMGHAGA+VSGGKGTA AKF A E AGVY+SRSPA LG+TM+ AF+E G ++
Sbjct:    5 ALARAAPVRGARRLSATAKVWVDANTRVICQGFTGKTGSFHSEQAIAYGTNMVGGVTPKKGGQTHLGLPVFDSVKEAVQEVKPDASVIYVPPPFCKAAILDAIENEIGLVVAITEGVPQHDMVEVKYHLERQSATRLIGPNCPGIIKPGECKIGIMPGYIHAKGKIGVVSRSGTLTYEAVHQTTVAGLGQSTCVGIGGDPFNGTNFIDCLERFTNDPETEGIIMIGEIGGSAEEEAAEWLKQNGDPSKPVVGFVAGTTAPPGRRMGHAGALVSGGKGTAQAKFEAFEDAGVYISRSPAQLGATMVKAFKEMGKAI 319          
BLAST of mRNA_P-wetherbeei_contig5597.1.1 vs. uniprot
Match: A0A7S2LEI1_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LEI1_9STRA)

HSP 1 Score: 485 bits (1249), Expect = 4.920e-170
Identity = 249/317 (78.55%), Postives = 275/317 (86.75%), Query Frame = 1
Query:  115 LSTVASAMG----RCARTAPRRSMSSTAKVWIDKNTKVIVQGFTGKQGTFHAEQAIAYGTQVVGGVTPKKGGQTHLGAPVFNTVADATAAVNPDASVIYVPPPFAASAIIDAMKAEIPLVVCITEGIPQLDMVKVKYHLRQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVAGFGQSTCVGIGGDPFNGTNFIDCLERFTADPETEGIIMIGEIGGQAEEDASEWLMEHGDPNKPVVGFIAGATAPPGRRMGHAGAIVSGGKGTAAAKFSALEAAGVYVSRSPAHLGSTMLAA 1053
            ++T A+A+G    R A+    RSMS+ AKVWIDK+T+VI QGFTGKQGTFH+EQAIAYGTQ+VGGVTPKKGGQ HLG PVFNTVA+A   V PDASVIYVPPPF A AI+DA++AEIPLVV ITEG+PQ DM +VK+ L+ Q  TRLIGPNCPGIIKPGECKIGIMPGYIH  GKIG+VSRSGTLTYEAV QTT AG GQSTCVGIGGDPFNGTNFIDCLERFT DP+TEGIIMIGEIGG AEE+A+EWL EHGDPNKPVVGFIAG TAPPGRRMGHAGAI++GGKG AA KF+ALE AGVYV+RSPA LG TML A
Sbjct:    1 MNTTATALGKHTLRNAQKTLSRSMSANAKVWIDKDTRVICQGFTGKQGTFHSEQAIAYGTQMVGGVTPKKGGQEHLGLPVFNTVAEAVEGVQPDASVIYVPPPFCAKAIMDAIEAEIPLVVAITEGVPQQDMARVKHMLKAQDKTRLIGPNCPGIIKPGECKIGIMPGYIHTPGKIGVVSRSGTLTYEAVHQTTTAGLGQSTCVGIGGDPFNGTNFIDCLERFTNDPQTEGIIMIGEIGGTAEEEAAEWLKEHGDPNKPVVGFIAGMTAPPGRRMGHAGAIIAGGKGGAAEKFAALEDAGVYVTRSPAKLGETMLKA 317          
BLAST of mRNA_P-wetherbeei_contig5597.1.1 vs. uniprot
Match: A0A836CPG3_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPG3_9STRA)

HSP 1 Score: 484 bits (1245), Expect = 8.690e-170
Identity = 241/302 (79.80%), Postives = 270/302 (89.40%), Query Frame = 1
Query:  172 MSSTAKVWIDKNTKVIVQGFTGKQGTFHAEQAIAYGTQVVGGVTPKKGGQTHLGAPVFNTVADATAAVNPDASVIYVPPPFAASAIIDAMKAEIPLVVCITEGIPQLDMVKVKYHLRQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVAGFGQSTCVGIGGDPFNGTNFIDCLERFTADPETEGIIMIGEIGGQAEEDASEWLMEHGDPNKPVVGFIAGATAPPGRRMGHAGAIVSGGKGTAAAKFSALEAAGVYVSRSPAHLGSTMLAAFEERGLSV 1077
            MSSTAKVW+DKNT++IVQGFTGKQGTFH+EQAIAYGT VVGGVTP KGG+ HLG PVFN+V +A   V  +A+VIYVPPP+AA+AI+DA+KAEI L+VCITEGIPQ DMV++K  +   T TRLIGPNCPGIIKPGECKIGIMPG+IHK G+IGIVSRSGTLTYEAVWQTTVAG GQSTCVGIGGDPFNGTNF+DCLE FT DPETEGI+MIGEIGG+AEE A EWLME+GD  KPVVGFIAG TAPPGRRMGHAGAIVSGGKGTAAAKF A++AAGVY+S+SPA LG TML AF+ERGL +
Sbjct:    1 MSSTAKVWVDKNTRLIVQGFTGKQGTFHSEQAIAYGTNVVGGVTPGKGGKEHLGLPVFNSVKEAVDDVQANATVIYVPPPYAAAAIMDAIKAEIGLIVCITEGIPQQDMVRIKAMMEGNTTTRLIGPNCPGIIKPGECKIGIMPGHIHKPGRIGIVSRSGTLTYEAVWQTTVAGLGQSTCVGIGGDPFNGTNFVDCLEAFTKDPETEGIVMIGEIGGEAEERACEWLMEYGDVRKPVVGFIAGMTAPPGRRMGHAGAIVSGGKGTAAAKFEAMKAAGVYISQSPALLGDTMLKAFKERGLPM 302          
BLAST of mRNA_P-wetherbeei_contig5597.1.1 vs. uniprot
Match: B7G0K7_PHATC (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G0K7_PHATC)

HSP 1 Score: 481 bits (1238), Expect = 1.300e-168
Identity = 240/294 (81.63%), Postives = 262/294 (89.12%), Query Frame = 1
Query:  172 MSSTAKVWIDKNTKVIVQGFTGKQGTFHAEQAIAYGTQVVGGVTPKKGGQTHLGAPVFNTVADATAAVNPDASVIYVPPPFAASAIIDAMKAEIPLVVCITEGIPQLDMVKVKYHLRQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVAGFGQSTCVGIGGDPFNGTNFIDCLERFTADPETEGIIMIGEIGGQAEEDASEWLMEHGDPNKPVVGFIAGATAPPGRRMGHAGAIVSGGKGTAAAKFSALEAAGVYVSRSPAHLGSTMLAA 1053
            MSSTAKVW+DKN++VI QGFTGKQGTFH+ QAI YGT +VGGVTPKKGGQ HLG PVFNTV +A   V PDASVIYVPPP+AA AI+DA++AEI LVVCITEGIPQ DM +VK+ LR Q  TRLIGPNCPGIIKPGECKIGIMPGYIH+ GKIG+VSRSGTLTYEAVWQTTV G GQSTCVGIGGDPFNGTNFIDCLERFT DPETEGIIMIGEIGG AEE+A+EWL E+GDPNKPVVGFIAG TAPPGRRMGHAGAI++GGKG A  KF ALE+AGV+VSRSPA LG+TML A
Sbjct:    1 MSSTAKVWVDKNSRVICQGFTGKQGTFHSTQAIDYGTNMVGGVTPKKGGQEHLGLPVFNTVQEAVDGVQPDASVIYVPPPYAAQAILDAIEAEIGLVVCITEGIPQQDMARVKHALRLQDRTRLIGPNCPGIIKPGECKIGIMPGYIHRPGKIGVVSRSGTLTYEAVWQTTVTGLGQSTCVGIGGDPFNGTNFIDCLERFTNDPETEGIIMIGEIGGSAEEEAAEWLKEYGDPNKPVVGFIAGLTAPPGRRMGHAGAIIAGGKGGAEEKFQALESAGVHVSRSPARLGATMLEA 294          
BLAST of mRNA_P-wetherbeei_contig5597.1.1 vs. uniprot
Match: A0A2D4BH57_PYTIN (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BH57_PYTIN)

HSP 1 Score: 479 bits (1234), Expect = 8.140e-168
Identity = 243/302 (80.46%), Postives = 268/302 (88.74%), Query Frame = 1
Query:  166 RSMSSTAKVWIDKNTKVIVQGFTGKQGTFHAEQAIAYGTQVVGGVTPKKGGQTHLGAPVFNTVADATAAVNPDASVIYVPPPFAASAIIDAMKAEIPLVVCITEGIPQLDMVKVKYHLRQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVAGFGQSTCVGIGGDPFNGTNFIDCLERFTADPETEGIIMIGEIGGQAEEDASEWLMEHGDPNKPVVGFIAGATAPPGRRMGHAGAIVSGGKGTAAAKFSALEAAGVYVSRSPAHLGSTMLAAFEERGL 1071
            R+MS++AKVWI+K TKVI QGFTGKQGTFH+EQAIAYGT++VGGVTPKKGG THLG PVF+TV +A  A   DASVIYVPPPF A AIIDA++AEIPLVV ITEGIPQ DMVKVK+HLRQQ+ TRLIGPNCPGIIKPGECK+GIMPG+IH+KG+IGIVSRSGTLTYEAV QTT AG GQST +GIGGDPFNGTNFIDCLERFT DPETEGIIMIGEIGG AEE+A+EWL  HGDPNKPVV FIAG TAPPGRRMGHAGAIVSGGKGTA  KF+AL+ AGV V+RSPA LGS ML  F++R L
Sbjct:   19 RNMSASAKVWINKETKVICQGFTGKQGTFHSEQAIAYGTKMVGGVTPKKGGTTHLGLPVFDTVKEAKEATGADASVIYVPPPFCAQAIIDAIEAEIPLVVAITEGIPQKDMVKVKWHLRQQSVTRLIGPNCPGIIKPGECKMGIMPGHIHQKGRIGIVSRSGTLTYEAVAQTTAAGLGQSTVIGIGGDPFNGTNFIDCLERFTNDPETEGIIMIGEIGGSAEEEAAEWLKAHGDPNKPVVSFIAGITAPPGRRMGHAGAIVSGGKGTAEGKFAALQDAGVSVTRSPARLGSMMLEEFKKRNL 320          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5597.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ40_ECTSI1.970e-18786.18Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
F0YDA5_AURAN5.760e-17782.24Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A7R9ZLR7_9STRA3.920e-17281.61Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A1E7FEJ7_9STRA2.580e-17178.37Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A7S0AIP9_9STRA9.600e-17180.46Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A8J2SSG9_9STRA2.790e-17076.83Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A7S2LEI1_9STRA4.920e-17078.55Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A836CPG3_9STRA8.690e-17079.80Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
B7G0K7_PHATC1.300e-16881.63Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A2D4BH57_PYTIN8.140e-16880.46Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5597contigP-wetherbeei_contig5597:156..2410 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FJ40
Preferred nameSCS-alpha
PFAMsCoA_binding,Ligase_CoA
Model size1084
Max annot lvl2759|Eukaryota
KEGG rclassRC00004,RC00014
KEGG koko:K01899
KEGG ReactionR00432,R00727
KEGG Pathwayko00020,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00009,M00011
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0004776,GO:0005488,GO:0005507,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006104,GO:0006105,GO:0006139,GO:0006163,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0010035,GO:0010038,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019637,GO:0019693,GO:0019752,GO:0030312,GO:0031974,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0042221,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0046483,GO:0046686,GO:0046872,GO:0046914,GO:0050896,GO:0051186,GO:0055086,GO:0055114,GO:0070013,GO:0071704,GO:0071944,GO:0072350,GO:0072521,GO:1901135,GO:1901360,GO:1901564
Exons5
Evalue3.23e-188
EggNOG OGsCOG0074@1|root,KOG1255@2759|Eukaryota
EC6.2.1.4,6.2.1.5
Descriptionsuccinate-CoA ligase (GDP-forming) activity
Cds size1083
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186832.6588311-CDS-P-wetherbeei_contig5597:155..4301683186832.6588311-CDS-P-wetherbeei_contig5597:155..430Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5597 156..430 -
1683186832.672368-CDS-P-wetherbeei_contig5597:782..9431683186832.672368-CDS-P-wetherbeei_contig5597:782..943Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5597 783..943 -
1683186832.683069-CDS-P-wetherbeei_contig5597:1353..15561683186832.683069-CDS-P-wetherbeei_contig5597:1353..1556Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5597 1354..1556 -
1683186832.69417-CDS-P-wetherbeei_contig5597:1850..20091683186832.69417-CDS-P-wetherbeei_contig5597:1850..2009Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5597 1851..2009 -
1683186832.7089288-CDS-P-wetherbeei_contig5597:2125..24101683186832.7089288-CDS-P-wetherbeei_contig5597:2125..2410Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5597 2126..2410 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5597.1.1prot_P-wetherbeei_contig5597.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5597 156..2410 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5597.1.1

>prot_P-wetherbeei_contig5597.1.1 ID=prot_P-wetherbeei_contig5597.1.1|Name=mRNA_P-wetherbeei_contig5597.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=361bp
APLCIILVFARPSLAYRVAAGRLQPERRKLLGSKMAASLSTVASAMGRCA
RTAPRRSMSSTAKVWIDKNTKVIVQGFTGKQGTFHAEQAIAYGTQVVGGV
TPKKGGQTHLGAPVFNTVADATAAVNPDASVIYVPPPFAASAIIDAMKAE
IPLVVCITEGIPQLDMVKVKYHLRQQTATRLIGPNCPGIIKPGECKIGIM
PGYIHKKGKIGIVSRSGTLTYEAVWQTTVAGFGQSTCVGIGGDPFNGTNF
IDCLERFTADPETEGIIMIGEIGGQAEEDASEWLMEHGDPNKPVVGFIAG
ATAPPGRRMGHAGAIVSGGKGTAAAKFSALEAAGVYVSRSPAHLGSTMLA
AFEERGLSVS*
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mRNA from alignment at P-wetherbeei_contig5597:156..2410-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5597.1.1 ID=mRNA_P-wetherbeei_contig5597.1.1|Name=mRNA_P-wetherbeei_contig5597.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2255bp|location=Sequence derived from alignment at P-wetherbeei_contig5597:156..2410- (Phaeothamnion wetherbeei SAG_119_79)
GCACCTCTGTGTATCATCCTCGTCTTTGCGCGGCCGTCGCTGGCGTACCG GGTCGCTGCCGGACGCTTGCAACCTGAGAGACGTAAACTACTAGGAAGCA AGATGGCAGCTTCCCTCAGCACCGTTGCCTCCGCGATGGGGCGGTGCGCC CGCACTGCCCCGCGACGATCAATGTCGTCCACTGCAAAGGTCTGGATCGA CAAAAACACAAAAGTTATTGTCCAGGGCTTCACCGGGAAGCAGGGGACAT TTCATGCCGAGCAAGCAATCGCCTACGGGACACAGGTGAGAAGGATGCCA TTTACCGCGTGCCTTTGCAGATCCACTTATTTTATAAAACGCATTTCCGA AACAATGTAACTTTCCCTGCTTGGCCCTCTTCGAAAACTTTTCGACGCCA GGTAGTAGGCGGCGTCACGCCCAAGAAGGGAGGGCAGACGCATTTGGGTG CCCCAGTCTTCAACACCGTCGCCGATGCCACTGCGGCTGTCAATCCAGAC GCGTCGGTCATCTACGTGCCGCCGCCTTTTGCGGCATCTGCCATCATAGA TGCTATGAAAGTGGGTGGTAATCGGTTGAACAACTTCTCTGCAACGTATT TCCTAACTCTTTCAAGGCCCTTTGAAACATCGGAAATGATTGCTTCTGAT GGCGAGTGCCTTGTATGAGATCTAAAATATGGTGCTTACATCATTCCCTC AGATTCTGCATGACGTTACGTTCCCAGTCGGTGACAATTCGAACCTGGGG TATTCTTTCAGTGTATTTCTGGGAGCTTCGCCCGCTTTTGCTTCTGAGTG TTTCGCTGTGGTTCTCATTCTTTTCACCCCGCGTACGTATATACTGTGCT TTAGGCGGAGATCCCGCTGGTGGTGTGCATCACGGAGGGCATCCCGCAGC TGGACATGGTCAAGGTAAAATACCACCTGCGGCAGCAGACGGCGACGCGG CTAATCGGCCCCAATTGCCCGGGCATCATCAAGCCCGGCGAGTGCAAAAT TGGCATCATGCCCGGCTACATCCACAAGAAGGGCAAGATCGGCATCGTCT CCCGCAGGTGTGTGCGTCCGCATATCTGCCGTCTGGTCGTCGGCCCGTCT CGGTCGTCATGTCTCTGTCGGAGGGAGGGAAAGGCGCGGCAGCTCCTGCT CGTGTCCGGCTCTCTCGGGCGAACCGTCTCTTTTGGCGCCTCGTTTCTGC CACGGGAGAGAGATTTCTTCCTCAGCAAAGCTTTCCCTTCTTTGCGGCCC TTGAGCCTTCTGTGCTCCATAGCGATGTTGGTTGCGGCCTCAGCGTTTTT TAAAGAGCACCTTTCTTCTTCTCAGTGCCTGCTGTCTCCTAGAGCTCGGT GAAAATCTAGATCCCCGAACACATCCAGTCTACGGCTTTGTTTCACTTTC ATCCTCTTTTGCTGCACGAAAAACACCAAATGACACAATGTGCTGGCCAT GGCAATACCACCGGCAGCGGCACACTGACGTACGAGGCGGTGTGGCAGAC GACGGTGGCGGGGTTCGGGCAGAGCACGTGCGTGGGCATCGGCGGTGACC CTTTCAACGGCACCAACTTCATCGACTGCCTCGAGCGCTTCACCGCTGAC CCCGAGACCGAGGGCATCATCATGATCGGTGAGAGCCGGGCGGGCGAGAG TAATAAGCTGGAGGTGGAGCTGCCTGACCGGGGGCTTCTGATGCCGGGGC GAAGCGGACCAGGAAGAAGCCGGGGCGGAAAGAAGACGATAGAGGCATCT CGTTTGCGTTTTCTGGGGCACTGCCGCAGCTCTTCCTTCTCGATACTTTA ACGGTCGTAACCTTCAAACGGGAACGATAATTTCATCCAAGAGATGTTTT GAGCAGTTTTGCTTTGTTTTTCTTGCATTAGGGTCCCTTGACCACGTTCT TGCAGTCTTGTGGTTGGTTTCTTTTTCCCTGTCTGACCTCCCGCCCAATT CTTTAACCCTGTTTTCTGATTCCGCCGCAGGCGAGATCGGCGGGCAGGCG GAGGAGGACGCGTCGGAGTGGCTTATGGAGCACGGCGACCCCAACAAGCC CGTGGTGGGTTTCATCGCAGGCGCCACCGCCCCTCCGGGCCGACGGATGG GCCACGCCGGAGCCATCGTTTCGGGCGGCAAGGGCACCGCCGCCGCCAAG TTCTCAGCGCTCGAGGCCGCGGGAGTCTACGTCTCGCGGTCGCCGGCGCA TCTGGGCAGCACCATGCTCGCCGCCTTCGAGGAGAGGGGATTGTCCGTGT CGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5597:156..2410-

>mRNA_P-wetherbeei_contig5597.1.1 ID=mRNA_P-wetherbeei_contig5597.1.1|Name=mRNA_P-wetherbeei_contig5597.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1083bp|location=Sequence derived from alignment at P-wetherbeei_contig5597:156..2410- (Phaeothamnion wetherbeei SAG_119_79)
GCACCTCTGTGTATCATCCTCGTCTTTGCGCGGCCGTCGCTGGCGTACCG
GGTCGCTGCCGGACGCTTGCAACCTGAGAGACGTAAACTACTAGGAAGCA
AGATGGCAGCTTCCCTCAGCACCGTTGCCTCCGCGATGGGGCGGTGCGCC
CGCACTGCCCCGCGACGATCAATGTCGTCCACTGCAAAGGTCTGGATCGA
CAAAAACACAAAAGTTATTGTCCAGGGCTTCACCGGGAAGCAGGGGACAT
TTCATGCCGAGCAAGCAATCGCCTACGGGACACAGGTAGTAGGCGGCGTC
ACGCCCAAGAAGGGAGGGCAGACGCATTTGGGTGCCCCAGTCTTCAACAC
CGTCGCCGATGCCACTGCGGCTGTCAATCCAGACGCGTCGGTCATCTACG
TGCCGCCGCCTTTTGCGGCATCTGCCATCATAGATGCTATGAAAGCGGAG
ATCCCGCTGGTGGTGTGCATCACGGAGGGCATCCCGCAGCTGGACATGGT
CAAGGTAAAATACCACCTGCGGCAGCAGACGGCGACGCGGCTAATCGGCC
CCAATTGCCCGGGCATCATCAAGCCCGGCGAGTGCAAAATTGGCATCATG
CCCGGCTACATCCACAAGAAGGGCAAGATCGGCATCGTCTCCCGCAGCGG
CACACTGACGTACGAGGCGGTGTGGCAGACGACGGTGGCGGGGTTCGGGC
AGAGCACGTGCGTGGGCATCGGCGGTGACCCTTTCAACGGCACCAACTTC
ATCGACTGCCTCGAGCGCTTCACCGCTGACCCCGAGACCGAGGGCATCAT
CATGATCGGCGAGATCGGCGGGCAGGCGGAGGAGGACGCGTCGGAGTGGC
TTATGGAGCACGGCGACCCCAACAAGCCCGTGGTGGGTTTCATCGCAGGC
GCCACCGCCCCTCCGGGCCGACGGATGGGCCACGCCGGAGCCATCGTTTC
GGGCGGCAAGGGCACCGCCGCCGCCAAGTTCTCAGCGCTCGAGGCCGCGG
GAGTCTACGTCTCGCGGTCGCCGGCGCATCTGGGCAGCACCATGCTCGCC
GCCTTCGAGGAGAGGGGATTGTCCGTGTCGTGA
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