prot_P-wetherbeei_contig55927.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig55927.1.1
Unique Name	prot_P-wetherbeei_contig55927.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	83

Homology

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BLAST of mRNA_P-wetherbeei_contig55927.1.1 vs. uniprot
Match: A0A1G9YT59_9BACT (DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains n=2 Tax=Siphonobacter aquaeclarae TaxID=563176 RepID=A0A1G9YT59_9BACT)

HSP 1 Score: 111 bits (277), Expect = 1.530e-28
Identity = 44/83 (53.01%), Postives = 68/83 (81.93%), Query Frame = 0

Query:    1 MKRILVVEDHPIMSAGTCQMVRNYLTDAVFTEVDTFWKALQAANMEQYDLVIMDVGIPGGNSVQMVEKFRTMHPNMRLLMFSG 83
            MK++LVVEDHPI+SA TCQ++  Y+ D   TEV TFW+AL+   +E+YDLV+MD+G+PGGN+++M+ + R++ P +R+L+F+G
Sbjct:   22 MKKVLVVEDHPIVSAATCQVITQYVPDVECTEVSTFWRALELVGLEEYDLVVMDLGVPGGNTIEMITRLRSIRPGIRILIFTG 104

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BLAST of mRNA_P-wetherbeei_contig55927.1.1 vs. uniprot
Match: A0A1G9YKI8_9BACT (Two component transcriptional regulator, LuxR family n=1 Tax=Siphonobacter aquaeclarae TaxID=563176 RepID=A0A1G9YKI8_9BACT)

HSP 1 Score: 103 bits (258), Expect = 6.620e-26
Identity = 46/83 (55.42%), Postives = 63/83 (75.90%), Query Frame = 0

Query:    1 MKRILVVEDHPIMSAGTCQMVRNYLTDAVFTEVDTFWKALQAANMEQYDLVIMDVGIPGGNSVQMVEKFRTMHPNMRLLMFSG 83
            MKRIL+VEDHPI++  T   V  YL DAV  + ++FWKAL+    E +DLVI+D+GIPGGNS+QM+EK R+  P +R+L+F+G
Sbjct:    1 MKRILIVEDHPIVATATTLAVSQYLPDAVCVDTNSFWKALELVETEPFDLVILDLGIPGGNSIQMIEKLRSRQPKVRILIFTG 83

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BLAST of mRNA_P-wetherbeei_contig55927.1.1 vs. uniprot
Match: A0A5B0FQU7_9BACT (Response regulator transcription factor n=1 Tax=Dyadobacter sp. UC 10 TaxID=2605428 RepID=A0A5B0FQU7_9BACT)

HSP 1 Score: 101 bits (251), Expect = 6.610e-25
Identity = 46/83 (55.42%), Postives = 63/83 (75.90%), Query Frame = 0

Query:    1 MKRILVVEDHPIMSAGTCQMVRNYLTDAVFTEVDTFWKALQAANMEQYDLVIMDVGIPGGNSVQMVEKFRTMHPNMRLLMFSG 83
            MK IL+ EDHPIM +GT Q+V  Y  D+V TEVDTF KA+ +A  +  DL I+D+GIPGGNSV+M+E F+  HP++++L+FS 
Sbjct:    1 MKHILIAEDHPIMRSGTRQIVHTYFPDSVITEVDTFKKAIMSAGEKACDLAILDIGIPGGNSVKMIEVFKERHPDVKVLIFSS 83

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BLAST of mRNA_P-wetherbeei_contig55927.1.1 vs. uniprot
Match: A0A5B0FPA1_9BACT (Response regulator transcription factor n=1 Tax=Dyadobacter sp. UC 10 TaxID=2605428 RepID=A0A5B0FPA1_9BACT)

HSP 1 Score: 101 bits (252), Expect = 2.060e-24
Identity = 47/83 (56.63%), Postives = 64/83 (77.11%), Query Frame = 0

Query:    1 MKRILVVEDHPIMSAGTCQMVRNYLTDAVFTEVDTFWKALQAANMEQYDLVIMDVGIPGGNSVQMVEKFRTMHPNMRLLMFSG 83
            MK IL+ EDHPIM +GT Q+V  Y+  AV TEVDTF KAL +A+ + YDL I+D+GIPGGNSV+M+E F+  +P +++L+FS 
Sbjct:   72 MKNILIAEDHPIMRSGTRQIVHTYMPGAVITEVDTFKKALLSASEKTYDLAILDIGIPGGNSVKMIENFKEKYPAVKVLIFSS 154

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BLAST of mRNA_P-wetherbeei_contig55927.1.1 vs. uniprot
Match: A0A5B0FRD9_9BACT (Response regulator transcription factor n=1 Tax=Dyadobacter sp. UC 10 TaxID=2605428 RepID=A0A5B0FRD9_9BACT)

HSP 1 Score: 94.4 bits (233), Expect = 3.290e-22
Identity = 44/83 (53.01%), Postives = 60/83 (72.29%), Query Frame = 0

Query:    1 MKRILVVEDHPIMSAGTCQMVRNYLTDAVFTEVDTFWKALQAANMEQYDLVIMDVGIPGGNSVQMVEKFRTMHPNMRLLMFSG 83
            MK IL+ +DHP+M  GT Q+V  ++ DA  TE D+F KA+ AA  E + LVIMD+G+PGGNSV+MVE F+   P+ ++LM SG
Sbjct:    1 MKHILIADDHPLMRGGTRQIVVGFIPDAKITEADSFKKAILAAEKESFHLVIMDIGMPGGNSVKMVETFKRRWPDTKILMLSG 83

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BLAST of mRNA_P-wetherbeei_contig55927.1.1 vs. uniprot
Match: UPI001BE17A1D (response regulator transcription factor n=1 Tax=Dyadobacter sp. CECT 9275 TaxID=2822344 RepID=UPI001BE17A1D)

HSP 1 Score: 84.7 bits (208), Expect = 1.630e-18
Identity = 37/83 (44.58%), Postives = 60/83 (72.29%), Query Frame = 0

Query:    1 MKRILVVEDHPIMSAGTCQMVRNYLTDAVFTEVDTFWKALQAANMEQYDLVIMDVGIPGGNSVQMVEKFRTMHPNMRLLMFSG 83
            MK IL+ EDH ++  GT  ++++ + DAV ++VD F K +QA +++ YDL+I+D+ IPGGN+ +MVE  R   P++++LMFS 
Sbjct:    1 MKHILIAEDHAVVRIGTKHLLQSLIPDAVVSDVDDFDKIIQAIDVQYYDLLILDINIPGGNNTKMVELIRAKSPSIKILMFSS 83

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BLAST of mRNA_P-wetherbeei_contig55927.1.1 vs. uniprot
Match: A0A5B0FQI3_9BACT (Response regulator transcription factor n=1 Tax=Dyadobacter sp. UC 10 TaxID=2605428 RepID=A0A5B0FQI3_9BACT)

HSP 1 Score: 84.7 bits (208), Expect = 1.880e-18
Identity = 39/82 (47.56%), Postives = 57/82 (69.51%), Query Frame = 0

Query:    1 MKRILVVEDHPIMSAGTCQMVRNYLTDAVFTEVDTFWKALQAANMEQYDLVIMDVGIPGGNSVQMVEKFRTMHPNMRLLMFS 82
            M RIL+ +DHP+M AGT Q + N++ +   TEVD+F KA+ AA+   +DL I+D+ +PGGNSV+MVE F    P + +L+ S
Sbjct:    1 MIRILIADDHPLMRAGTRQALNNFIAEVDITEVDSFKKAVHAADSVDFDLAILDISMPGGNSVKMVETFNKKKPGLPVLILS 82

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BLAST of mRNA_P-wetherbeei_contig55927.1.1 vs. uniprot
Match: C6W5Q8_DYAFD (Two component transcriptional regulator, LuxR family n=27 Tax=Dyadobacter TaxID=120831 RepID=C6W5Q8_DYAFD)

HSP 1 Score: 83.2 bits (204), Expect = 6.430e-18
Identity = 37/83 (44.58%), Postives = 56/83 (67.47%), Query Frame = 0

Query:    1 MKRILVVEDHPIMSAGTCQMVRNYLTDAVFTEVDTFWKALQAANMEQYDLVIMDVGIPGGNSVQMVEKFRTMHPNMRLLMFSG 83
            MK IL+ EDH ++  GT  ++++ + D+  ++VD F K LQ    + YDL+I+D+ IPGGN+ +MVE  RT  P +R+LMFS 
Sbjct:    1 MKHILIAEDHAVVRIGTKHLLKSLIPDSTISDVDDFDKILQELETKAYDLLILDINIPGGNTTKMVETIRTKSPGIRILMFSS 83

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BLAST of mRNA_P-wetherbeei_contig55927.1.1 vs. uniprot
Match: A0A316ASX8_9BACT (DNA-binding NarL/FixJ family response regulator n=2 Tax=Dyadobacter TaxID=120831 RepID=A0A316ASX8_9BACT)

HSP 1 Score: 80.5 bits (197), Expect = 7.060e-17
Identity = 37/83 (44.58%), Postives = 55/83 (66.27%), Query Frame = 0

Query:    1 MKRILVVEDHPIMSAGTCQMVRNYLTDAVFTEVDTFWKALQAANMEQYDLVIMDVGIPGGNSVQMVEKFRTMHPNMRLLMFSG 83
            MK I++ EDH ++  GT  ++++ L DA  T VD F   + A N   YDL+I+D+ IPGGN+ +MVE  R   P++++LMFSG
Sbjct:    1 MKHIIIAEDHAVVRIGTKHLLQSLLPDAEITGVDDFDGIITAMNERSYDLLILDINIPGGNNTKMVETIRAKAPDIKILMFSG 83

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BLAST of mRNA_P-wetherbeei_contig55927.1.1 vs. uniprot
Match: A0A1H6TXB3_9BACT (Two component transcriptional regulator, LuxR family n=5 Tax=Spirosomaceae TaxID=2896860 RepID=A0A1H6TXB3_9BACT)

HSP 1 Score: 79.3 bits (194), Expect = 2.120e-16
Identity = 34/83 (40.96%), Postives = 56/83 (67.47%), Query Frame = 0

Query:    1 MKRILVVEDHPIMSAGTCQMVRNYLTDAVFTEVDTFWKALQAANMEQYDLVIMDVGIPGGNSVQMVEKFRTMHPNMRLLMFSG 83
            MK IL+ EDH ++  GT  ++++ + ++  T VDTF K L   + + +DL+I+D+ IPGGN+ +M+E  R   P++R+LMFS 
Sbjct:    1 MKHILIAEDHAVVRIGTKHLLKSLIPESQITGVDTFQKVLLELSSQNFDLLILDINIPGGNNTKMIETIRIKRPDIRILMFSS 83

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig55927.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig55927.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A1G9YT59_9BACT	1.530e-28	53.01	DNA-binding response regulator, NarL/FixJ family, ...	[more]
A0A1G9YKI8_9BACT	6.620e-26	55.42	Two component transcriptional regulator, LuxR fami...	[more]
A0A5B0FQU7_9BACT	6.610e-25	55.42	Response regulator transcription factor n=1 Tax=Dy...	[more]
A0A5B0FPA1_9BACT	2.060e-24	56.63	Response regulator transcription factor n=1 Tax=Dy...	[more]
A0A5B0FRD9_9BACT	3.290e-22	53.01	Response regulator transcription factor n=1 Tax=Dy...	[more]
UPI001BE17A1D	1.630e-18	44.58	response regulator transcription factor n=1 Tax=Dy...	[more]
A0A5B0FQI3_9BACT	1.880e-18	47.56	Response regulator transcription factor n=1 Tax=Dy...	[more]
C6W5Q8_DYAFD	6.430e-18	44.58	Two component transcriptional regulator, LuxR fami...	[more]
A0A316ASX8_9BACT	7.060e-17	44.58	DNA-binding NarL/FixJ family response regulator n=...	[more]
A0A1H6TXB3_9BACT	2.120e-16	40.96	Two component transcriptional regulator, LuxR fami...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.2300		coord: 1..83 e-value: 4.6E-14 score: 54.4
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 4..82 e-value: 9.2E-11 score: 41.9
IPR001789	Signal transduction response regulator, receiver domain	PROSITE	PS50110	RESPONSE_REGULATORY	coord: 3..83 score: 18.440928
IPR011006	CheY-like superfamily	SUPERFAMILY	52172	CheY-like	coord: 1..83

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig55927	contig	P-wetherbeei_contig55927:271..519 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig55927.1.1	mRNA_P-wetherbeei_contig55927.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig55927 271..519 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig55927.1.1 ID=prot_P-wetherbeei_contig55927.1.1|Name=mRNA_P-wetherbeei_contig55927.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=83bp
MKRILVVEDHPIMSAGTCQMVRNYLTDAVFTEVDTFWKALQAANMEQYDL
VIMDVGIPGGNSVQMVEKFRTMHPNMRLLMFSG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001789	Sig_transdc_resp-reg_receiver
IPR011006	CheY-like_superfamily