mRNA_P-wetherbeei_contig55891.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig55891.1.1 vs. uniprot
Match: A0A523PE64_9PROT (Bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523PE64_9PROT) HSP 1 Score: 174 bits (441), Expect = 1.960e-53 Identity = 82/121 (67.77%), Postives = 98/121 (80.99%), Query Frame = 1
Query: 19 LDVDTLIADIAARLKQRIQDHNLSQPALVGIRTGGVWLAQRLQKKLKLPGPIGELNIAFYRDDFSRIGMHPTVEPSALPFDVNDRHLLLVDDILYTGRTIRAAMNEIFDYGRPRSISLVVL 381
+DVD L+ DI +L +RI D P ++G+ TGGVW+AQ L K++ P+GELNIAFYRDDFSRIG+HPTVEPS LPF V+DRHL+L+DDILYTGRT+RAAMNEIFDYGRP SI LVVL
Sbjct: 3 IDVDALLDDIGTQLIRRIADLGREDPVVIGVHTGGVWVAQHLHKRIAATLPLGELNIAFYRDDFSRIGLHPTVEPSKLPFAVDDRHLILIDDILYTGRTVRAAMNEIFDYGRPASIMLVVL 123
BLAST of mRNA_P-wetherbeei_contig55891.1.1 vs. uniprot
Match: A0A7C1XS28_9GAMM (Bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C1XS28_9GAMM) HSP 1 Score: 168 bits (426), Expect = 3.990e-51 Identity = 76/123 (61.79%), Postives = 101/123 (82.11%), Query Frame = 1
Query: 13 EQLDVDTLIADIAARLKQRIQDHNLSQPALVGIRTGGVWLAQRLQKKLKLPGPIGELNIAFYRDDFSRIGMHPTVEPSALPFDVNDRHLLLVDDILYTGRTIRAAMNEIFDYGRPRSISLVVL 381
E LDVDTL+AD+A L++ ++ ++ P ++GI TGGVW+A+RL ++L L P+G LNI FYRDDF+RIG+HP VEPS LPF+V DRH++LVDD+L+TGRT+RAA+NEIFDYGRP S+ L VL
Sbjct: 3 ENLDVDTLLADLANDLRRTLEARGITDPLMIGIHTGGVWVAERLHRELGLAEPLGMLNIVFYRDDFTRIGVHPRVEPSNLPFEVEDRHIVLVDDVLHTGRTVRAALNEIFDYGRPASVLLAVL 125
BLAST of mRNA_P-wetherbeei_contig55891.1.1 vs. uniprot
Match: A0A5Q4FJP0_9GAMM (Bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR n=4 Tax=Chromatiales TaxID=135613 RepID=A0A5Q4FJP0_9GAMM) HSP 1 Score: 166 bits (421), Expect = 2.290e-50 Identity = 76/119 (63.87%), Postives = 99/119 (83.19%), Query Frame = 1
Query: 25 VDTLIADIAARLKQRIQDHNLSQPALVGIRTGGVWLAQRLQKKLKLPGPIGELNIAFYRDDFSRIGMHPTVEPSALPFDVNDRHLLLVDDILYTGRTIRAAMNEIFDYGRPRSISLVVL 381
V L+ +A L+ R+QD ++ P LVGI +GGVW+A++LQ +L+L P+G L+I+FYRDDFSRIGMHP V+PS++PF V DRH+LLVDD+L+TGRTIRAAMNEIFDYGRP S++LVVL
Sbjct: 5 VKQLLDRMADELRHRLQDKGITDPGLVGIHSGGVWVAEQLQSRLQLEAPLGRLDISFYRDDFSRIGMHPQVKPSSIPFSVEDRHILLVDDVLFTGRTIRAAMNEIFDYGRPASVTLVVL 123
BLAST of mRNA_P-wetherbeei_contig55891.1.1 vs. uniprot
Match: A0A3D5DAT9_9GAMM (Bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DAT9_9GAMM) HSP 1 Score: 165 bits (418), Expect = 6.160e-50 Identity = 79/121 (65.29%), Postives = 94/121 (77.69%), Query Frame = 1
Query: 19 LDVDTLIADIAARLKQRIQDHNLSQPALVGIRTGGVWLAQRLQKKLKLPGPIGELNIAFYRDDFSRIGMHPTVEPSALPFDVNDRHLLLVDDILYTGRTIRAAMNEIFDYGRPRSISLVVL 381
+DV L+ ++ L++ I VG+ TGGVW+AQ L +L P P+GELNIAFYRDDFSRIG+HPTVEPS LPFDVN+RHL+LVDDILYTGRT+RAAMNEIFDYGRP SI+LV L
Sbjct: 3 IDVAELLDRMSVELQKNITAEARENTVFVGVHTGGVWIAQHLHNRLANPFPVGELNIAFYRDDFSRIGLHPTVEPSKLPFDVNNRHLILVDDILYTGRTVRAAMNEIFDYGRPSSITLVAL 123
BLAST of mRNA_P-wetherbeei_contig55891.1.1 vs. uniprot
Match: A0A1Z9UM19_9GAMM (Bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9UM19_9GAMM) HSP 1 Score: 164 bits (414), Expect = 2.740e-49 Identity = 79/121 (65.29%), Postives = 96/121 (79.34%), Query Frame = 1
Query: 19 LDVDTLIADIAARLKQRIQDHNLSQPALVGIRTGGVWLAQRLQKKLKLPGPIGELNIAFYRDDFSRIGMHPTVEPSALPFDVNDRHLLLVDDILYTGRTIRAAMNEIFDYGRPRSISLVVL 381
LD + LI I + + + S+ VGI TGGVWLAQR+ K L+L IGELNIAFYRDDFS++G+HPTVEPS +PFD+ND+H++LVDDIL+TGRTIRAAMNE+FDYGRP SISLVVL
Sbjct: 7 LDTEELIESIVRQTNVLLDGLSSSETCFVGIHTGGVWLAQRICKDLRLSSVIGELNIAFYRDDFSKLGVHPTVEPSQIPFDINDKHVILVDDILHTGRTIRAAMNELFDYGRPLSISLVVL 127
BLAST of mRNA_P-wetherbeei_contig55891.1.1 vs. uniprot
Match: A0A521R955_9GAMM (Bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521R955_9GAMM) HSP 1 Score: 163 bits (412), Expect = 5.350e-49 Identity = 76/119 (63.87%), Postives = 98/119 (82.35%), Query Frame = 1
Query: 25 VDTLIADIAARLKQRIQDHNLSQPALVGIRTGGVWLAQRLQKKLKLPGPIGELNIAFYRDDFSRIGMHPTVEPSALPFDVNDRHLLLVDDILYTGRTIRAAMNEIFDYGRPRSISLVVL 381
V+ +IA++AARL + + D + P ++GI+TGGVW+A+RL+ +L + P+G LNIAFYRDDFSRIGMHP V PS LPF V DRH++LVDD+L+TGRT+RAAMNEIFDYGRP SI+L VL
Sbjct: 8 VEAIIAEMAARLGKFLADRDRRDPLILGIQTGGVWVAERLRTQLGIDHPLGRLNIAFYRDDFSRIGMHPHVTPSLLPFSVEDRHVILVDDVLHTGRTVRAAMNEIFDYGRPASIALAVL 126
BLAST of mRNA_P-wetherbeei_contig55891.1.1 vs. uniprot
Match: A0A523KAI6_9GAMM (Bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523KAI6_9GAMM) HSP 1 Score: 163 bits (412), Expect = 5.350e-49 Identity = 74/120 (61.67%), Postives = 96/120 (80.00%), Query Frame = 1
Query: 22 DVDTLIADIAARLKQRIQDHNLSQPALVGIRTGGVWLAQRLQKKLKLPGPIGELNIAFYRDDFSRIGMHPTVEPSALPFDVNDRHLLLVDDILYTGRTIRAAMNEIFDYGRPRSISLVVL 381
DV + ++ +++ I +++LS+ ++GI TGGVW+A+RL KKL + P+G+LNIAFYRDDFSRIG HP V PS LPFD+ D+HLLLVDD+LYTGRTIRAA+NEIFDYGRP S+ L VL
Sbjct: 7 DVKQCVDEMITQIRAEIANNDLSEMLMIGIHTGGVWIAERLHKKLNIEPPLGKLNIAFYRDDFSRIGTHPQVTPSKLPFDIEDKHLLLVDDVLYTGRTIRAALNEIFDYGRPASVRLAVL 126
BLAST of mRNA_P-wetherbeei_contig55891.1.1 vs. uniprot
Match: A0A1G0G3N1_9GAMM (Bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase n=1 Tax=Gammaproteobacteria bacterium RBG_16_51_14 TaxID=1798265 RepID=A0A1G0G3N1_9GAMM) HSP 1 Score: 162 bits (411), Expect = 7.130e-49 Identity = 76/120 (63.33%), Postives = 95/120 (79.17%), Query Frame = 1
Query: 22 DVDTLIADIAARLKQRIQDHNLSQPALVGIRTGGVWLAQRLQKKLKLPGPIGELNIAFYRDDFSRIGMHPTVEPSALPFDVNDRHLLLVDDILYTGRTIRAAMNEIFDYGRPRSISLVVL 381
D++ L+ IA LK +Q + P ++GI TGG+W+A L KKL L P+GELNIAFYRDDFS IG+HP V PS LPFDV++RH++LVDD+LYTGRTIRAA+NEIFDYGRP S++LVVL
Sbjct: 5 DIEGLLEQIALDLKSLLQAQLRTDPVMIGIHTGGIWVAAYLHKKLHLADPLGELNIAFYRDDFSHIGIHPRVTPSNLPFDVDNRHIILVDDVLYTGRTIRAALNEIFDYGRPASVTLVVL 124
BLAST of mRNA_P-wetherbeei_contig55891.1.1 vs. uniprot
Match: A0A1G0JZ65_9GAMM (Bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_52_10 TaxID=1798297 RepID=A0A1G0JZ65_9GAMM) HSP 1 Score: 162 bits (410), Expect = 1.180e-48 Identity = 74/121 (61.16%), Postives = 99/121 (81.82%), Query Frame = 1
Query: 19 LDVDTLIADIAARLKQRIQDHNLSQPALVGIRTGGVWLAQRLQKKLKLPGPIGELNIAFYRDDFSRIGMHPTVEPSALPFDVNDRHLLLVDDILYTGRTIRAAMNEIFDYGRPRSISLVVL 381
++V+ LI +A +L+ ++ +S+PA++GI TGG+W+A+RL+ KL++ P+G LNIAFYRDDFS+IGMHP V PS LPF+V RH++LVDD+LYTGRTIRAAMNEIFD+GRP SI L VL
Sbjct: 9 VNVEVLIDRLADQLQVWLRSKQISEPAIIGIHTGGIWIAERLRDKLRIAAPLGHLNIAFYRDDFSQIGMHPHVTPSKLPFEVEGRHIILVDDVLYTGRTIRAAMNEIFDFGRPASICLAVL 129
BLAST of mRNA_P-wetherbeei_contig55891.1.1 vs. uniprot
Match: A0A3S0TWG6_9GAMM (Bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3S0TWG6_9GAMM) HSP 1 Score: 162 bits (409), Expect = 1.310e-48 Identity = 72/120 (60.00%), Postives = 99/120 (82.50%), Query Frame = 1
Query: 22 DVDTLIADIAARLKQRIQDHNLSQPALVGIRTGGVWLAQRLQKKLKLPGPIGELNIAFYRDDFSRIGMHPTVEPSALPFDVNDRHLLLVDDILYTGRTIRAAMNEIFDYGRPRSISLVVL 381
D + LI +A +L++ + ++ PALVGI TGGVW+A+RL+++L + P+G+++IAFYRDDFSRIG+HP V PS LPFDV+DRH++L+DD+LYTGRTIRAA+NE+FDYGRP S+ L VL
Sbjct: 3 DAEFLIEALAGQLRELLTRRGIADPALVGIHTGGVWIAERLRRRLGILTPLGQMDIAFYRDDFSRIGVHPQVRPSELPFDVDDRHIVLIDDVLYTGRTIRAALNELFDYGRPASVLLAVL 122 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55891.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig55891.1.1 >prot_P-wetherbeei_contig55891.1.1 ID=prot_P-wetherbeei_contig55891.1.1|Name=mRNA_P-wetherbeei_contig55891.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=127bp MHELEQLDVDTLIADIAARLKQRIQDHNLSQPALVGIRTGGVWLAQRLQKback to top mRNA from alignment at P-wetherbeei_contig55891:1..381- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig55891.1.1 ID=mRNA_P-wetherbeei_contig55891.1.1|Name=mRNA_P-wetherbeei_contig55891.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=381bp|location=Sequence derived from alignment at P-wetherbeei_contig55891:1..381- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig55891:1..381- >mRNA_P-wetherbeei_contig55891.1.1 ID=mRNA_P-wetherbeei_contig55891.1.1|Name=mRNA_P-wetherbeei_contig55891.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=381bp|location=Sequence derived from alignment at P-wetherbeei_contig55891:1..381- (Phaeothamnion wetherbeei SAG_119_79)back to top |