mRNA_P-wetherbeei_contig5585.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-wetherbeei_contig5585.1.1
Unique Name	mRNA_P-wetherbeei_contig5585.1.1
Type	mRNA
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)

Homology

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BLAST of mRNA_P-wetherbeei_contig5585.1.1 vs. uniprot
Match: A0A507DML1_9FUNG (DNA-directed DNA polymerase n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DML1_9FUNG)

HSP 1 Score: 118 bits (296), Expect = 2.910e-27
Identity = 62/141 (43.97%), Postives = 86/141 (60.99%), Query Frame = 1

Query: 2536 SELAAHKHNRTWRRSSRRPLPGRTIIGSRWVFTKKRAEDGTILRYKARLVGQGFRQRHGVDSEATFAPVMSADAMHFLLSLAAEFGFKVHQMDVVMAYLSAPLTEQLWMRPPPGPFGFEGCVALELLKAIHGLKHAAYLWH 2958
            +EL +   N TW    R P P   ++ SRWVF  KR  DGTI ++KARLV +GF QRHG+D + T+APV+   A+   L+L A+ G   HQ+D V AYL+  +   ++M  P GP  F   VAL L ++++GLK A  LW+
Sbjct:    3 TELDSLTVNNTWSVVDR-PAPPTNVVDSRWVFALKRNVDGTINKFKARLVAKGFTQRHGLDYQDTYAPVVGWPALRLFLALCAQMGLDAHQLDAVTAYLNGLIDFNIYMELPSGPLRFTNKVAL-LNRSLYGLKQAGKLWN 141

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BLAST of mRNA_P-wetherbeei_contig5585.1.1 vs. uniprot
Match: A0A5C3E5T1_9BASI (Uncharacterized protein n=2 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3E5T1_9BASI)

HSP 1 Score: 130 bits (327), Expect = 7.800e-27
Identity = 68/143 (47.55%), Postives = 90/143 (62.94%), Query Frame = 1

Query: 2533 RSELAAHKHNRTWRRSSRRPLPGRTIIGSRWVFTKKRAEDGTILRYKARLVGQGFRQRHGVDSEATFAPVMSADAMHFLLSLAAEFGFKVHQMDVVMAYLSAPLTEQLWMRPPPGPFGFEGCVALELLKAIHGLKHAAYLWHI 2961
            + ELA+   N TW        PGR  +GS+WVF  K   DGT+ +YKARLV QGF Q+HGVD + TFAPV+    +  L++LAA+ G+  HQMDV+ AYL+  L E+++MR PPG    EG     L KA++GLK A   W+I
Sbjct:  850 KKELASLSENGTWTLEDL--PPGRRAVGSKWVFKIKLKADGTVDKYKARLVAQGFTQQHGVDYDETFAPVLKFATLRLLIALAAQEGWLAHQMDVITAYLNGNLEEEIYMRAPPGYA--EGDKVCRLCKALYGLKQAGRTWYI 988

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BLAST of mRNA_P-wetherbeei_contig5585.1.1 vs. uniprot
Match: A0A507DZK9_9FUNG (DNA-directed DNA polymerase n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DZK9_9FUNG)

HSP 1 Score: 125 bits (314), Expect = 8.590e-26
Identity = 68/145 (46.90%), Postives = 94/145 (64.83%), Query Frame = 1

Query: 2536 SELAAHKHNRTWRRSSRRPLP-GRTIIGSRWVFTKKRAEDGTILRYKARLVGQGFRQRHGVDSEATFAPVMSADAMHFLLSLAAEFGFKVHQMDVVMAYLSAPLTEQLWMRPPPGPFGFEGCVALELLKAIHGLKHAAYLWHIYL 2967
            SEL +   N+TW  +   PLP G   I ++WVF +KR  DGTI +YKARLV +GF Q  G+D   TFAPV+    +  L++LA   GF +HQ+DVV A+L+  L E+++MRPPPG    +G V L+LL++++ LK A   WHI L
Sbjct:  168 SELESLATNKTWVVT---PLPPGCRAITAKWVFKRKRNADGTIAKYKARLVARGFTQIEGIDFTETFAPVVRMQTLRLLIALALNLGFLIHQLDVVTAFLNGILYEEIYMRPPPGVSVPDGYV-LKLLRSLYSLKQAGREWHIRL 308

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BLAST of mRNA_P-wetherbeei_contig5585.1.1 vs. uniprot
Match: A0A151U130_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151U130_CAJCA)

HSP 1 Score: 115 bits (288), Expect = 1.460e-25
Identity = 61/147 (41.50%), Postives = 88/147 (59.86%), Query Frame = 1

Query: 2539 ELAAHKHNRTWRRSSRRPLPGRTIIGSRWVFTKKRAEDGTILRYKARLVGQGFRQRHGVDSEATFAPVMSADAMHFLLSLAAEFGFKVHQMDVVMAYLSAPLTEQLWMRPPPGPFGFEGCVALELLKAIHGLKHAAYLWHIYLRTCV 2979
            EL A + N+TW  S  +  PG+ I+G RWV+  K   DGT+ RYKARLV QGF Q  GVD   TF+PV     + FLL +     + +HQ+DV  A+L   L E+++MRPPPG    +  +  +L K+++GLK A+  W+  L + +
Sbjct:    4 ELTALETNKTW--SLVKLPPGKPIVGCRWVYKVKYKADGTLERYKARLVAQGFTQTEGVDFFETFSPVAKLTTVRFLLLIVVSNNWFLHQLDVDNAFLHGELKEEVYMRPPPGMTISDPSLVCKLKKSLYGLKQASRQWNQKLNSAL 148

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BLAST of mRNA_P-wetherbeei_contig5585.1.1 vs. uniprot
Match: A0A2G2YIY4_CAPAN (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Capsicum annuum TaxID=4072 RepID=A0A2G2YIY4_CAPAN)

HSP 1 Score: 113 bits (283), Expect = 1.590e-25
Identity = 61/138 (44.20%), Postives = 82/138 (59.42%), Query Frame = 1

Query: 2542 LAAHKHNRTWRRSSRRPLPGRTIIGSRWVFTKKRAEDGTILRYKARLVGQGFRQRHGVDSEATFAPVMSADAMHFLLSLAAEFGFKVHQMDVVMAYLSAPLTEQLWMRPPPGPFGFEGCVALELLKAIHGLKHAAYLW 2955
            LAA + N TW    R      TIIGS WV++ K   DG++ RYKARLV QG++Q +G+D E TFAPV     +H LL+LA    +K+HQ+DV  A+L   L E ++M PPPG           L K+++GLK A + W
Sbjct:    5 LAALEENDTWDMVDR--PTNATIIGSTWVYSVKMKADGSLDRYKARLVAQGYKQEYGIDYEETFAPVAKMTPVHILLALALIRSWKLHQLDVKNAFLHRDLQEVIYMNPPPGYKHSSPNQVCRLKKSLYGLKQAPHSW 140

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BLAST of mRNA_P-wetherbeei_contig5585.1.1 vs. uniprot
Match: A0A5C3FVP2_PSEA2 (Uncharacterized protein n=2 Tax=Pseudozyma antarctica TaxID=84753 RepID=A0A5C3FVP2_PSEA2)

HSP 1 Score: 124 bits (310), Expect = 6.720e-25
Identity = 62/143 (43.36%), Postives = 85/143 (59.44%), Query Frame = 1

Query: 2539 ELAAHKHNRTWRRSSRRPLPGRTIIGSRWVFTKKRAEDGTILRYKARLVGQGFRQRHGVDSEATFAPVMSADAMHFLLSLAAEFGFKVHQMDVVMAYLSAPLTEQLWMRPPPGPFGFEGCVA---LELLKAIHGLKHAAYLWH 2958
            EL  H  N TW      P     IIGSRWVF  KR  DGT+ +YKARLV QGF Q+HG+D + TFAPV+    +  L+ ++ +  +K++QMDV  AYL+  + + L+MRPPP P    G       +L K+++GLK A   W+
Sbjct:  869 ELELHAENNTWTLVD--PPANANIIGSRWVFKVKRKADGTVDKYKARLVAQGFAQKHGIDYDETFAPVVKLATLRLLMIISIQLEWKIYQMDVATAYLNGEVDKDLYMRPPPTPDAPRGATTGQVCKLNKSLYGLKQAGRTWY 1009

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BLAST of mRNA_P-wetherbeei_contig5585.1.1 vs. uniprot
Match: A0A507DTC0_9FUNG (DNA-directed DNA polymerase n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DTC0_9FUNG)

HSP 1 Score: 122 bits (307), Expect = 7.550e-25
Identity = 58/146 (39.73%), Postives = 94/146 (64.38%), Query Frame = 1

Query: 2521 RQCARSELAAHKHNRTWRRSSRRPLPGRTIIGSRWVFTKKRAEDGTILRYKARLVGQGFRQRHGVDSEATFAPVMSADAMHFLLSLAAEFGFKVHQMDVVMAYLSAPLTEQLWMRPPPGPFGFEGCVALELLKAIHGLKHAAYLWH 2958
            +Q   +EL++H+ N+TW   + +  PG  ++ S+WVF  KR  DG+I ++KARLV +GF QR G+D   T+APV+  + +  LL+LAA+    VHQMDV+ A+L+  L  ++WMR P G         ++L ++++GLK + +LW+
Sbjct:  219 KQAIDAELSSHRTNKTWDTDTMQTPPGTHLVDSKWVFKVKRNADGSIKKFKARLVARGFTQREGIDFNETYAPVVKFNTLRALLALAAKLDLHVHQMDVITAFLNGDLDVEIWMRLPAGVADN----VVKLRRSLYGLKQSPHLWN 360

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BLAST of mRNA_P-wetherbeei_contig5585.1.1 vs. uniprot
Match: A0A0A9WI29_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9WI29_LYGHE)

HSP 1 Score: 118 bits (295), Expect = 1.460e-24
Identity = 59/121 (48.76%), Postives = 80/121 (66.12%), Query Frame = 1

Query: 2596 PGRTIIGSRWVFTKKRAEDGTILRYKARLVGQGFRQRHGVDSEATFAPVMSADAMHFLLSLAAEFGFKVHQMDVVMAYLSAPLTEQLWMRPPPGPFGFEGCVALELLKAIHGLKHAAYLWH 2958
            PG+T IGS+WVF  K   DGT+ RYKARLV QGF Q+ GVD E T++PV+S  A+  L  LA    + +HQMDV  AYL+  L E+++M+ P G  G EG V   LL++++GLK +   W+
Sbjct:   65 PGKTAIGSKWVFKIKYMADGTVERYKARLVAQGFTQKPGVDYEETYSPVISLPAIRLLFKLAVNNNWIIHQMDVKTAYLNGELKEEIYMKCPDGITGAEGKVC-RLLRSLYGLKQSGRSWY 184

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BLAST of mRNA_P-wetherbeei_contig5585.1.1 vs. uniprot
Match: H3G5Q7_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5Q7_PHYRM)

HSP 1 Score: 111 bits (277), Expect = 3.780e-24
Identity = 64/151 (42.38%), Postives = 94/151 (62.25%), Query Frame = 1

Query: 2530 ARSELAAHKHNRTWRRSSRRPLP-GRTIIGSRWVFTKKRAEDGTILRYKARLVGQGFRQRHGVDSEATFAPVMSADAMHFLLSLAAEFGFKVHQMDVVMAYLSAPLTEQLWMRPPPG--PFGFEGCVALELLKAIHGLKHAAYLWHIYLRT 2973
            AR+E  +   N+TWR +    LP GR  +  RWVF  K   DGTI RYKARLV +GF Q++G+D +  F+PV+  + +  LL++AA    ++HQMDV  A+L+  L E+++M  P G    G E  V  +LLK+++GLK A  +W++ L T
Sbjct:    2 ARAEYTSLMENKTWRLTK---LPKGRRSLQCRWVFVVKYKSDGTIDRYKARLVIKGFLQKYGIDYDEIFSPVIRMEVLWLLLTIAALLDLEIHQMDVKTAFLNGFLDEEIYMEQPEGFTTRGKEHLVC-KLLKSLYGLKQAPRIWYLTLCT 148

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BLAST of mRNA_P-wetherbeei_contig5585.1.1 vs. uniprot
Match: A0A5C3ERV5_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3ERV5_9BASI)

HSP 1 Score: 120 bits (302), Expect = 4.590e-24
Identity = 61/140 (43.57%), Postives = 90/140 (64.29%), Query Frame = 1

Query: 2539 ELAAHKHNRTWRRSSRRPLPGRTIIGSRWVFTKKRAEDGTILRYKARLVGQGFRQRHGVDSEATFAPVMSADAMHFLLSLAAEFGFKVHQMDVVMAYLSAPLTEQLWMRPPPGPFGFEGCVALELLKAIHGLKHAAYLWH 2958
            EL +H+ N TW  +S+ P     ++  +WV+  K   DG++ +YKARLV +GF QR G+D E TFAPV+    +  L++LA   G K+ QMDVV A+L+  +TE ++M+PPPG +  EG   L+L KA++GLK A   W+
Sbjct:  379 ELESHRENGTWEVTSK-PTSDGHVVDCKWVYKLKINPDGSLDKYKARLVARGFTQREGIDYEETFAPVLKFSTLRILIALATSLGLKMEQMDVVTAFLNGVITEDIFMKPPPGYW--EG-KTLKLKKALYGLKQAGRKWY 514

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig5585.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig5585.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A507DML1_9FUNG	2.910e-27	43.97	DNA-directed DNA polymerase n=1 Tax=Powellomyces h...	[more]
A0A5C3E5T1_9BASI	7.800e-27	47.55	Uncharacterized protein n=2 Tax=Ustilago trichopho...	[more]
A0A507DZK9_9FUNG	8.590e-26	46.90	DNA-directed DNA polymerase n=1 Tax=Powellomyces h...	[more]
A0A151U130_CAJCA	1.460e-25	41.50	Retrovirus-related Pol polyprotein from transposon...	[more]
A0A2G2YIY4_CAPAN	1.590e-25	44.20	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A5C3FVP2_PSEA2	6.720e-25	43.36	Uncharacterized protein n=2 Tax=Pseudozyma antarct...	[more]
A0A507DTC0_9FUNG	7.550e-25	39.73	DNA-directed DNA polymerase n=1 Tax=Powellomyces h...	[more]
A0A0A9WI29_LYGHE	1.460e-24	48.76	Retrovirus-related Pol polyprotein from transposon...	[more]
H3G5Q7_PHYRM	3.780e-24	42.38	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A5C3ERV5_9BASI	4.590e-24	43.57	Integrase catalytic domain-containing protein n=1 ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig5585	contig	P-wetherbeei_contig5585:411..3797 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	15368.BRADI2G31610.1
PFAMs	DUF4219,RVT_2,Retrotran_gag_2,gag_pre-integrs,rve,zf-CCHC
Model size	3387
Max annot lvl	35493\|Streptophyta
Hectar predicted targeting category	mitochondrion
Exons	1
Evalue	3.33e-26
EggNOG OGs	COG2801@1\|root,KOG0017@2759\|Eukaryota,37THH@33090\|Viridiplantae,3GG2K@35493\|Streptophyta,3M5VU@4447\|Liliopsida,3IIIB@38820\|Poales
Description	gag-polypeptide of LTR copia-type
Cds size	756
COG category	L

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1683186830.9645128-UTR-P-wetherbeei_contig5585:410..809	1683186830.9645128-UTR-P-wetherbeei_contig5585:410..809	Phaeothamnion wetherbeei SAG_119_79	UTR	P-wetherbeei_contig5585 411..809 -
1683186830.9883835-UTR-P-wetherbeei_contig5585:1565..3797	1683186830.9883835-UTR-P-wetherbeei_contig5585:1565..3797	Phaeothamnion wetherbeei SAG_119_79	UTR	P-wetherbeei_contig5585 1566..3797 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1683186830.9776535-CDS-P-wetherbeei_contig5585:809..1565	1683186830.9776535-CDS-P-wetherbeei_contig5585:809..1565	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig5585 810..1565 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig5585.1.1	prot_P-wetherbeei_contig5585.1.1	Phaeothamnion wetherbeei SAG_119_79	polypeptide	P-wetherbeei_contig5585 810..1565 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-wetherbeei_contig5585:411..3797-
coding sequence from alignment at P-wetherbeei_contig5585:411..3797-

protein sequence of mRNA_P-wetherbeei_contig5585.1.1

>prot_P-wetherbeei_contig5585.1.1 ID=prot_P-wetherbeei_contig5585.1.1|Name=mRNA_P-wetherbeei_contig5585.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=252bp
MAAAHATLAAVTAAASTAPHLRHRRMRLTRRHRRPPSALGLRCLRLAAFP
HLRSFGGGGAAVLGTDRRDHRGRSGDSRRSSSADSGGGAGRAGGRCRQCA
RSELAAHKHNRTWRRSSRRPLPGRTIIGSRWVFTKKRAEDGTILRYKARL
VGQGFRQRHGVDSEATFAPVMSADAMHFLLSLAAEFGFKVHQMDVVMAYL
SAPLTEQLWMRPPPGPFGFEGCVALELLKAIHGLKHAAYLWHIYLRTCVA
L*

mRNA from alignment at P-wetherbeei_contig5585:411..3797-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-wetherbeei_contig5585.1.1 ID=mRNA_P-wetherbeei_contig5585.1.1|Name=mRNA_P-wetherbeei_contig5585.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3387bp|location=Sequence derived from alignment at P-wetherbeei_contig5585:411..3797- (Phaeothamnion wetherbeei SAG_119_79)
GCTCAGGACAGACCAGCAGCGCCGCGCCTCCGTCGTGATGAAAGAGCTCA
CAAAAACGTACAAGGCGAAGTCCGGCAAGGCGATGAACGACGCGATGCGG
GCCTGTACGCTCTTCGAGCTGGCTCCTGGAAGCAATGCGTCGCCGACCGT
CATACAGGCATCTTTTAACGAGATTCGTCAGCCGCTGGAGGCGCTGGGCA
CGCCGGTGGCAGAGATACAGGCGCTGTCGAGGATCCTGGAAGTTATCAGG
GCGTCGGACCGCTTGGCGAGCTCCTGGCGACGTCTGCCGAGGTCTTTGAA
GCCATGGCCGACGTCTGGTCGGAGGAGATCATTCGCGCGCTGCCGACTCT
CTCGCTTGACGGGTGCGGCGGCGGCGGAGGTGGTGGCGGCGGCGGCGGCA
GGGGCGGCGGTGACCGCAATCGCGACGCTGATTGACGTGGCCGCAACGGC
GGCGACGGTGGCGCTGGGCGTCGGCGCGAGGAAGATTTGCGGCAAGGGAA
GCAGCAATGGTGCTGGCGGGGGCTATGGCGACGGTTACGGTGGTGGAAGC
TACAGCGGCTACGGCGGCGGCGGCGGCCGACGTGGCGGCCGCAGGGGCAA
CCAGTGGGATCCTGGCACGCCGTACCGTACGCGAGAGGAGTACCTCGATA
GCGACGATGCCTGGTACAGCCGCTACCGCAAGATCAGCCACAGCATGTTG
TACTGGCCGGCCCTCCACCGAAGACGGGAGGTAATAACATTCTTTTAGGC
TGCTCAAATCTCGGAGTTTTGACTGTGCCTTTCGCAGTGCGTGCCACTTT
TCCCGCGATCTGCGGAACTGCCGGCTATGCCAGCTGGATTGTGGACTCTG
GCACTCAGGCGCACGTCACCAGCTCTCTCCGGAGCCTGTCCAACGTGCGG
CCGTACGAAAGTATCATGCGCGGCGTCGGCGGCGGAACCGCACCGATCGT
AGCTTTGGGCAACCTTGATGGGTTCGTCTGTGATACTCTCGGCATCGAAG
TGCCGATCTCACAGAGGCGGCAGTGGTGGCAATGGCGACACTGGCGGCGA
CGGCGGCGGCGACAGCGGCGACAGCGCTGGCGGCAGTTACGAAGGCAGAG
CAGCTGCCGTGCCAACCAGTGAAGAGCGACCTGATCGGACGTCAGGTCAG
CGTCCTTTGGGATAAACTGGACGATGCTTTGACGATAGAGTCTGGGAAGT
GGGAACAGTGGTTACCTACAACCCGAAGCGAGTAAACGGCGCTTACGAAA
CTCAGTTCCCGAACCAGGTGGCCCCCGGCAACGGAACTTCGAAGCTGGGG
ACCACCAGGCAGGCGATGCTGCACGGTCAGGCGTTTGGCACATCTCCACG
ACCGAGGAGCTGGGCAACTTCGTCCCGACGGCGCAGGGCAGCCGGGCGAA
GAAGAGGCTGGCGCAGGCAATTGCTTTTCAGCGGCGGCGTGATGCTCAGA
GTGCTGAGGCAGAAGTGGCTGCCTCGACCGCATCAGGAGCGGCTGCTGCT
GACAGTGTGGTTGGTGCGTCGGCGACGGCGGCGGCAGCGGGGTCGACGAA
GGCGGCAGCGGAGTCTACGGAGCTGGCGGCAGATATGGCAGCAGAGTCGA
CGGAAGAACCAGCCGCCGTGGCGGTCGTAGCGGAGGCGATGACTAGCACC
AGCGCAGCTACCTCAGAAACTTGATCGCCGGTACAACCGATGGCCGCATC
TCCAGCTCCGATGTCCGCTGCCGGCGACGGATGAGACGGCGGCAACGGCG
TTGCCGGCACTGAGGCCGACGACGCCATAAAGCGGCGATCGCAAGCGAAG
CCAAGGATGTTAGTCCTTACGTCCGCCCGAGGCCGCTTTGCGTCAGCGCA
CCATCCTTTTGCGACGACGGTCACGTTGGTTTTATGTTCGGCCTATGCGG
CGCTGTGAAACGATCTTTGGCGGCGGCGCTAGGAGCAGCCTGCGTGTGGC
GGCGATGGCGGCACCAACGCCACTCAAAGCTGCTGCCCGAGCAGCTCCAC
CTGCTACCACGGTTGCGGCATCGACGGCGATGGAGGGGATGATGGCGTCA
ACGGCAGTGCTCACGGCGGCGGCAGACGGGCCCGCAGCCGTAGCAACTAC
TGCCGAACTCCTCGCGGCTCAAAAAGTCTACCACCGCTGGGCGGTCATGC
GGCTCCCGGCAGACGGTGAGCGTGGCGGGACGACGGACGTCGGCGCCGCT
GCCGTTATTGTGCTAGCGGCGACGGCGTAGCGATGGCGGCGGCACACGCC
ACCTTGGCGGCGGTGACAGCGGCGGCTTCGACGGCGCCGCACCTACGGCA
CCGTCGGATGCGGCTGACACGGCGGCATCGGCGGCCACCCTCAGCGCTTG
GGCTGAGATGTCTTCGTCTGGCCGCCTTCCCCCATCTCCGTTCCTTTGGC
GGCGGAGGCGCTGCAGTACTCGGCACTGACCGCCGAGATCATCGCGGCCG
CAGCGGAGACAGTCGACGGTCCTCTTCCGCGGACAGTGGCGGAGGTGCTG
GACGGGCTGGAGGCCGATGCCGGCAATGCGCGAGGAGCGAGCTTGCTGCC
CACAAGCACAACAGGACGTGGCGCCGTTCGTCGCGCCGCCCCTTGCCGGG
ACGCACCATCATCGGCAGCCGGTGGGTGTTTACGAAGAAACGGGCGGAGG
ACGGCACCATTTTGCGTTACAAAGCGCGGCTTGTGGGGCAGGGTTTCAGG
CAGCGGCATGGAGTGGATTCTGAGGCGACGTTTGCGCCGGTTATGTCCGC
GGACGCGATGCATTTTCTGCTTTCTCTGGCGGCGGAGTTCGGGTTCAAGG
TGCACCAGATGGACGTGGTGATGGCGTACCTCAGTGCTCCATTGACAGAA
CAATTGTGGATGCGACCGCCGCCGGGACCGTTTGGTTTTGAGGGCTGCGT
GGCGTTGGAGCTGTTGAAGGCTATTCATGGGCTGAAGCACGCGGCGTACC
TGTGGCATATCTACCTGCGCACGTGCGTGGCTCTTTAGCATCGGTTTTGC
CGGAGCGAGAGGCGGCGGCACCATAGGAAAGCGCGGCCAGAAAAGATACC
TCGTTAGAAGTAAGCAGTTACGCTGGCAGCGGACCCTCTCCGGCATCGGG
CTTCAGTCCCAGACTAACTAGGATTAACTTCAAGACGGAAAGGGAATGGT
CTGGGCAATCATGCAATCGCTGTTGGAAAGGAAGTGAATTCAGGAGCCGC
AAGGCAGAGTCAGGAATCCGGTAACAAGACCGGCTCATTAGTCGGACGGA
AAGATGCACTGTAGCTGGCCAGGATAAGTGGCGCAACGGCTGACTGTTCT
GAATTGAATCCCTTGGAAGATCTCAGAAGTCACACTTCGGGAATAGTCCG
TCAGGCTTTCTGAGATATAATCACAATCAAACTTCTC

Coding sequence (CDS) from alignment at P-wetherbeei_contig5585:411..3797-

>mRNA_P-wetherbeei_contig5585.1.1 ID=mRNA_P-wetherbeei_contig5585.1.1|Name=mRNA_P-wetherbeei_contig5585.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=756bp|location=Sequence derived from alignment at P-wetherbeei_contig5585:411..3797- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGCGGCACACGCCACCTTGGCGGCGGTGACAGCGGCGGCTTCGAC
GGCGCCGCACCTACGGCACCGTCGGATGCGGCTGACACGGCGGCATCGGC
GGCCACCCTCAGCGCTTGGGCTGAGATGTCTTCGTCTGGCCGCCTTCCCC
CATCTCCGTTCCTTTGGCGGCGGAGGCGCTGCAGTACTCGGCACTGACCG
CCGAGATCATCGCGGCCGCAGCGGAGACAGTCGACGGTCCTCTTCCGCGG
ACAGTGGCGGAGGTGCTGGACGGGCTGGAGGCCGATGCCGGCAATGCGCG
AGGAGCGAGCTTGCTGCCCACAAGCACAACAGGACGTGGCGCCGTTCGTC
GCGCCGCCCCTTGCCGGGACGCACCATCATCGGCAGCCGGTGGGTGTTTA
CGAAGAAACGGGCGGAGGACGGCACCATTTTGCGTTACAAAGCGCGGCTT
GTGGGGCAGGGTTTCAGGCAGCGGCATGGAGTGGATTCTGAGGCGACGTT
TGCGCCGGTTATGTCCGCGGACGCGATGCATTTTCTGCTTTCTCTGGCGG
CGGAGTTCGGGTTCAAGGTGCACCAGATGGACGTGGTGATGGCGTACCTC
AGTGCTCCATTGACAGAACAATTGTGGATGCGACCGCCGCCGGGACCGTT
TGGTTTTGAGGGCTGCGTGGCGTTGGAGCTGTTGAAGGCTATTCATGGGC
TGAAGCACGCGGCGTACCTGTGGCATATCTACCTGCGCACGTGCGTGGCT
CTTTAG