mRNA_P-wetherbeei_contig558.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig558.2.1 vs. uniprot
Match: A0A835Z5W3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5W3_9STRA) HSP 1 Score: 209 bits (531), Expect = 6.400e-60 Identity = 135/319 (42.32%), Postives = 181/319 (56.74%), Query Frame = 3
Query: 249 NAGIGTRAAGRLVQRGYHVVMTTRNKTKGERVFGEISDEFPEGVKQGGR---LELMLCDLNDLESVAQFVLDFRSKFQRLDVLINDAGTTLPGRSKDNYQQLFQAGFLGAFVLTRGLLDLIEQTDGARVINLSSVMHRFGSTDWEAAALGWGRGALDVCSLNVFPNGYADAKLAMLMFTEELRRRFRSAGVSATAIAVHPGTVKTAIWGNVGG-FGAAYLVVIKDILFLEPDDGAFPVLYAATAPMDDLIKLNKEHDPLAPDHPPLYLEPYWLPFGLTIPFELLGPWIGVAASDASLPRDYVTRERRLWDAAHMLAELA 1193
N GIG R A L + G V++ R++ K EI+ E V+ GGR LELM DL D SV FV DF++K RLDVL+N+AG GR+K +F + F+G F+LT+ L D I T GARV+NL+S+MH +G DWE A WG S Y +KLAM++F++ELRRRFR AG +AT+ AV+PG V++ IW V F Y V++ FL + GAF +YAA AP+D L PD P LY +PY LP GL PFE+ GP++G A+ ++P D+ RLW+ + E A
Sbjct: 65 NTGIGKRTALHLARLGGTVILACRSQEKAAAARDEITAE----VQAGGRVAKLELMSLDLADTHSVRSFVSDFKAKHDRLDVLVNNAGLNAGGRTKQGLGLVFASNFVGHFLLTKLLQDTITATPGARVVNLASLMHHYGRVDWERAC--WGNDDWKGFS------SYQASKLAMVLFSQELRRRFRRAGGTATSFAVNPGAVRSDIWRFVPPPFKYVYDAVMR-AGFLNVEQGAFTSVYAAAAPLDALG---------GPDGP-LYWQPYLLPLGLAHPFEVAGPFVGATAAAPAVPPDHEREGARLWEECTRMVEAA 360
BLAST of mRNA_P-wetherbeei_contig558.2.1 vs. uniprot
Match: A0A835ZF30_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF30_9STRA) HSP 1 Score: 205 bits (522), Expect = 1.370e-58 Identity = 124/316 (39.24%), Postives = 175/316 (55.38%), Query Frame = 3
Query: 249 NAGIGTRAAGRLVQRGYHVVMTTRNKTKGERVFGEISDEFPEGVKQGGRLELMLCDLNDLESVAQFVLDFRSKFQRLDVLINDAGTTLPGRSKDNYQQLFQAGFLGAFVLTRGLLDLIEQTDGARVINLSSVMHRFGSTDWEAAALGWGRGALDVCSLNVFPNGYADAKLAMLMFTEELRRRFRSAGVSATAIAVHPGTVKTAIWGNVGGFGAAYLVVIKDILFLEPDDGAFPVLYAATAPMDDLIK-LNKEHDPLAPDHPPLYLEPYWLPFGLTIPFELLGPWIGVAASDASLPRDYVTRERRLWDAAHMLAELA 1193
N G+G R A L + VV+ RN KG E+ E + + +M +L S+ +FV DF++K+ RLD+L+N+AG PG + F A +LGA+++T L D I T GARVIN+SS +H +G+T WE AA+G RG D +NV + YAD+KLAM++FT ELRRRF + SA AI V PG V + IW V + V+ +FL PD P + AA AP+++L + K+ + L PLYL+PYW P PF++ GP+ G S SLP +Y +RLW + L + A
Sbjct: 60 NTGVGKRTAFHLAKMKATVVLAVRNMEKGHMAKKELIKELQKHKIMAPDINVMELELCSTGSIKRFVHDFKAKYNRLDILVNNAGQVDPGTTDQGLSSTFMADYLGAYMMTTMLYDTIRNTQGARVINVSSPLHHYGTTKWEDAAMGR-RGEPDF--MNVLFHCYADSKLAMMLFTNELRRRFAADNCSAVAICVSPGNVNSDIWRTVPIPLLMPMKVVMAAVFLTPDQACHPSVMAAAAPLNELKGFMAKDAEEL-----PLYLQPYWNPLKQAHPFDVFGPYAGTDVSIPSLPPNYEEEGKRLWFVSSELIKAA 367
BLAST of mRNA_P-wetherbeei_contig558.2.1 vs. uniprot
Match: D8LBW3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBW3_ECTSI) HSP 1 Score: 192 bits (487), Expect = 1.710e-53 Identity = 121/332 (36.45%), Postives = 174/332 (52.41%), Query Frame = 3
Query: 249 NAGIGTRAAGRLVQRGYHVVMTTRNKTKGERVFGEISDEFPEGVKQ-----------GGRLELMLCDLNDLESVAQFVLDFRSKF-QRLDVLINDAGTTL---PGRSKDNYQQLFQAGFLGAFVLTRGLLDLIEQTDGARVINLSSVMHRFGSTDWEAAALGWG--RGALDVCSLNVFPNGYADAKLAMLMFTEELRRRFRSAGVSATAIAVHPGTVKTAIWGNVGGFGAAYLVVIKDILFLEPDDGAFPVLYAATAPMDDLIKLNKEHDPLAPDHPPLYLEPYWLPFGLTIPFELLGPWIGVAASDASLPRDYVTRERRLWDAAHMLAELA 1193
N GIG+R A L + G V+M R+ +GE ++ +E E + + G LE+M CDL++LESV F +F+ K RLDVL+N+AG + P + D +F F+G F LT LL LI+ T ARV+ LSSVMH G TDWE+A +G RG+ YAD+KLAM++F +EL++RF +AG SATA+AV+PG V++ IW NV + LFL + G++ + AA P++ + Y +PYW+PF +PFE+ GP++G A L +D LW + E A
Sbjct: 54 NTGIGSRTAFNLAKAGAKVIMACRSLERGESARQQLEEEMRETLSKVEGGGGASAARQGTLEVMKCDLSELESVRTFAREFKVKHGDRLDVLVNNAGVGITDGPRVTADGLDLVFGVNFVGHFCLTNELLPLIQSTPAARVVCLSSVMHHSGGTDWESAVMGHPKRRGST-----------YADSKLAMVIFAKELKKRFAAAGSSATAVAVNPGAVRSDIWRNVPKLVMPVFDLFMRFLFLTSEQGSYTSVRAAALPLETVSGSG-------------YYQPYWMPFKRPLPFEVFGPFVGCAPGLPKLVKDEPAATSALWTTCERVIEAA 361
BLAST of mRNA_P-wetherbeei_contig558.2.1 vs. uniprot
Match: A0A6L3ERR4_9CHLR (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L3ERR4_9CHLR) HSP 1 Score: 154 bits (389), Expect = 6.280e-40 Identity = 96/248 (38.71%), Postives = 138/248 (55.65%), Query Frame = 3
Query: 249 NAGIGTRAAGRLVQRGYHVVMTTRNKTKGERVFGEISDEFPEGVKQGGRLELMLCDLNDLESVAQFVLDFRSKFQRLDVLINDAGTTLPG--RSKDNYQQLFQAGFLGAFVLTRGLLDLIEQTDGARVINLSSVMHRFGSTDWEAAALGWGRGALDVCSLNVFPN-----GYADAKLAMLMFTEELRRRFRSAGVSATAIAVHPGTVKTAIWGNVGGFGAAYLVVIKDILFLEPDDGAFPVLYAATAP 971
N+GIG A L Q+G V++ R+ KGE +I E P L+LM DL+DL SV QFV +F+ ++++LD+L+N+AG +P ++KD ++ F LG F LT LLDLI +T ARV+N+SS+ H+ G D+E +LN N Y +KLA L+FT EL+RRF++A ++A A A HPG T + + G F ++ I +P+ GA P LYAA AP
Sbjct: 26 NSGIGYETARALAQKGATVILACRSLPKGETAVSQIRQETPTA-----NLDLMQLDLSDLSSVRQFVQEFKEQYKQLDLLVNNAGVMVPPFTKTKDGFELQFGTNHLGHFALTGQLLDLIIRTPNARVVNVSSMAHKMGQIDFE--------------NLNAEKNYNRSGAYGQSKLANLLFTYELQRRFQTASINAVATAAHPGWTGTNLQSHSGLFS-----MLNPIFSQKPEMGALPTLYAAIAP 249
BLAST of mRNA_P-wetherbeei_contig558.2.1 vs. uniprot
Match: A0A835YP27_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP27_9STRA) HSP 1 Score: 151 bits (382), Expect = 5.000e-38 Identity = 103/316 (32.59%), Postives = 158/316 (50.00%), Query Frame = 3
Query: 249 NAGIGTRAAGRLVQRGYHVVMTTRNKTKGERVFGEISDEFPE-GVKQGGRLELMLCDLNDLESVAQFVLDFRSKFQRLDVLINDAGTTLPGRSKDNYQQLFQAGFLGAFVLTRGLLDLIEQTDGARVINLSSVMHRFGSTDWEAAALGWGRGALDVCSLNVFPNGYADAKLAMLMFTEELRRRFRSAGVSATAIAVHPGTVKTAIWGNVGGFGAAYLVVIKDILFLEPDDGAFPVLYAATAPMDDLIKLNKEHDPLAPDHPPLYLEPYWLPFGLTIPFELLGPWIGVAASDASLPRDYVTRERRLWDAAHMLAELA 1193
N GIG + A L + G ++M R+K +GE+ ++ F G+K +E+M DL + S+ F DF+ K+ L +L+N+AGT +PG + +F +LG F+LT L D I+ T ARV+N+SS++HR+G+T W AAA G RG+ + N + Y D+KLAM++FT+ + IW V + L + + FL + G + AA AP++ L + P LYL+PY P PF+++GP+ G + ASLP D RLWD + + E A
Sbjct: 112 NTGIGRKTAEHLAETGVTLIMACRSKERGEQAMADMERSFSRRGIKTN--IEVMQLDLLEPASIRAFARDFKQKYDALHILVNNAGTNIPGITDRGLDYVFTVSYLGHFMLTNLLYDTIKATPDARVVNVSSLLHRYGTTQWAAAATGK-RGSDNY--FNALFHVYCDSKLAMMIFTQ------------------------SDIWRAVPLWLRIPLDLFMRVAFLSTEQGCHTSVMAALAPLEALSTDGE---------PALYLQPYKGPVQKR-PFDVIGPFGGTVPTTASLPADVKAEGERLWDTSAKIWEAA 388
BLAST of mRNA_P-wetherbeei_contig558.2.1 vs. uniprot
Match: A0A7Y3BU72_9DELT (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3BU72_9DELT) HSP 1 Score: 145 bits (366), Expect = 1.180e-36 Identity = 98/243 (40.33%), Postives = 129/243 (53.09%), Query Frame = 3
Query: 249 NAGIGTRAAGRLVQRGYHVVMTTRNKTKGERVFGEISDEFPEGVKQGGRLELMLCDLNDLESVAQFVLDFRSKFQRLDVLINDAGTTLP--GRSKDNYQQLFQAGFLGAFVLTRGLLDLIEQTDGARVINLSSVMHRFGSTDWEAAALGWGRGALDVCSLNVFPNGYADAKLAMLMFTEELRRRFRSAGVSATAIAVHPGTVKTAIWGNVGGFGAAYLVVIKDILFLEPDDGAFPVLYAATAP 971
N+GIG A L ++G VVM RN K EI P G +E+M DL+DLESV +F +FR K+QRLD+LIN+AG +P G++ ++ F LG F LT LL LI T G+R++ +SSV H FG D+ + L W G + Y +KLA L+FT EL+RR +AG A+A HPG +T + V G +L L P GA P LYAATAP
Sbjct: 25 NSGIGFETARVLAEKGATVVMACRNLDKANPKAEEIRTANP-----GAMVEVMQLDLSDLESVKRFAQEFRGKYQRLDLLINNAGIMVPPYGQTAQGFETQFGVNHLGHFALTGALLGLITNTPGSRIVTVSSVAHLFGKIDF--SDLNWENGYKAQAA-------YGQSKLANLLFTYELQRRLAAAGKDTLAVAAHPGWTETNL--QVHAKGVKFL---NRFLAQAPPMGALPTLYAATAP 248
BLAST of mRNA_P-wetherbeei_contig558.2.1 vs. uniprot
Match: UPI000289A710 (oxidoreductase n=1 Tax=Salinibacterium sp. PAMC 21357 TaxID=1112215 RepID=UPI000289A710) HSP 1 Score: 142 bits (357), Expect = 3.260e-35 Identity = 101/251 (40.24%), Postives = 137/251 (54.58%), Query Frame = 3
Query: 249 NAGIGTRAAGRLVQRGYHVVMTTRNKTKGE----RVFGEISDEFPEGVKQGGRLELMLCDLNDLESVAQFVLDFRSKFQRLDVLINDAGTTLPGRSK--DNYQQLFQAGFLGAFVLTRGLLDLIEQTDGARVINLSSVMHRFGSTDWEAAALGWGRGALDVCSLNVFPNG-YADAKLAMLMFTEELRRRFRSAGVSATAIAVHPGTVKTAIWGNVGGFGAAYLVVIKDILFL---EPDDGAFPVLYAATAP 971
N+G+G + L++ G HVVMT R+ K E R+ GE+ + LE ML DL DLES+ +F +F SK RLD+LIN+AG + D ++ LG F LT LLD+I T GARV++LSSV HR+G ++ G L + + P Y +KLA L+FT EL+RRF +AGV A A+A HPGT T + ++ F YL +K ++FL P GA P L AAT P
Sbjct: 26 NSGLGFETSRALLKAGAHVVMTMRSAAKAETAATRLLGELGEVS---------LETMLLDLADLESIRRFSDEFHSKHSRLDLLINNAGIMMTDAQLTIDGFESQLGTNHLGHFALTGRLLDVIAATPGARVVSLSSVAHRWGFMEF---------GNLMFQNGSYTPRAAYGRSKLANLLFTYELQRRFEAAGVDAMAVAAHPGTAGTGLADHM--FDRWYLRPLKKLVFLGIQTPKQGAQPSLRAATDP 256
BLAST of mRNA_P-wetherbeei_contig558.2.1 vs. uniprot
Match: A0A7S3Y5K9_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5K9_HETAK) HSP 1 Score: 143 bits (360), Expect = 3.400e-35 Identity = 109/315 (34.60%), Postives = 154/315 (48.89%), Query Frame = 3
Query: 249 NAGIGTRAAGRLVQRGYHVVMTTRNKTKGERVFGEISDE-------FPEGVKQGGRLELMLCDLNDLESVAQFVLDFRSKFQRLDVLINDAGTTLPGRSKDNYQQLFQAGFLGAFVLTRGLLDLIEQT-DGARVINLSSVMHRFGST--DWEAAALGWGRGALDVCSLNVFPNGYADAKLAMLMFTEELRRRFRSAGVSATAIAVHPGTVKTAIWGNVGGFGAAYLVVIKDILFLEPDDGAFPVLYAATAPMDDLIKLNKEHDPLAPDHPPLYLEPYWLPFGLTIPFELLGPWIGVAASDASLPRDYVTRERRLW 1163
N GIG R+A L + G V++ R+ +G I +E FP + GR+ DL D ES+ F + +DVLIN+AG +K ++F FLG F+LT LL+ ++ GAR+IN+SSV+HRF + D+EA+A G + + Y ++KLAM++FT+ELRRR + G +A AV PG V++ IW + G A L LFL+ D GA P ++ A AP L H LY PY +PFE+LGP+ G S SLP + LW
Sbjct: 52 NCGIGFRSAAWLSKMGATVILACRSTERGLAAEKAIKEELETPLASFP--YRDTGRVVFHKLDLGDFESIRSFASTICQGYMNIDVLINNAGLNDGKMTKQGLDEVFGVNFLGHFLLTILLLEKLKNNFRGARIINVSSVVHRFSPSKPDFEASANGMDK-----------MHNYQNSKLAMVLFTKELRRRLK--GTQVSAYAVSPGAVRSEIWRSWRGLPRAALNAAMAALFLDTDQGAAPSIHCAAAPPAAL----GTH---------LYHCPYLTAPACPLPFEMLGPYAGALPSRPSLPDNEPEISADLW 338
BLAST of mRNA_P-wetherbeei_contig558.2.1 vs. uniprot
Match: A0A847SMC3_9ARCH (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Methanomassiliicoccus sp. TaxID=2528041 RepID=A0A847SMC3_9ARCH) HSP 1 Score: 140 bits (354), Expect = 1.130e-34 Identity = 92/245 (37.55%), Postives = 133/245 (54.29%), Query Frame = 3
Query: 249 NAGIGTRAAGRLVQRGYHVVMTTRNKTKGERVFGEISDEFPEGVKQGGRLELMLCDLNDLESVAQFVLDFRSKFQRLDVLINDAGT--TLPGRSKDNYQQLFQAGFLGAFVLTRGLLDLIEQTDGARVINLSSVMHRFGSTDWEAAALGWGRGALDVCSLNVFP--NGYADAKLAMLMFTEELRRRFRSAGVSATAIAVHPGTVKTAIWGNVGGFGAAYLVVIKDILFLEPDDGAFPVLYAATAP 971
N+GIG A L Q+G V++ RN K EI P G++E+M DL+DL+SV +F FR ++ RLD+LIN+AG T G++K ++Q F LG F LT LLD + T GAR++ +SS HR G+ D++ D+ S + Y +KLA L+FT EL+RR + G S A+A HPG+ +T N+ A++ ++ I+ + D GA P LYAAT P
Sbjct: 24 NSGIGWHTARVLAQKGATVIIACRNMQKANTAADEIRAFNP-----SGKVEVMPLDLSDLDSVREFEALFRERYDRLDLLINNAGIMFTPQGKTKQGFEQQFGTNHLGHFALTGILLDKLNGTPGARIVTVSSGAHRMGNIDFD-----------DLNSERDYSPYRAYGQSKLANLLFTYELQRRLIATGQSTLAVAAHPGSTRT----NLTRHSNAFVKLLDRIISQKSDMGALPTLYAATEP 248
BLAST of mRNA_P-wetherbeei_contig558.2.1 vs. uniprot
Match: A0A1U7NRS2_9DEIO (Oxidoreductase/Short-chain dehydrogenase n=3 Tax=Deinococcus TaxID=1298 RepID=A0A1U7NRS2_9DEIO) HSP 1 Score: 141 bits (356), Expect = 1.610e-34 Identity = 93/244 (38.11%), Postives = 129/244 (52.87%), Query Frame = 3
Query: 249 NAGIGTRAAGRLVQRGYHVVMTTRNKTKGERVFGEISDEFPEGVKQGGRLELMLCDLNDLESVAQFVLDFRSKFQRLDVLINDAGTTLP--GRSKDNYQQLFQAGFLGAFVLTRGLLDLIEQTDGARVINLSSVMHRFGSTDWEAAALGW-GRGALDVCSLNVFPNGYADAKLAMLMFTEELRRRFRSAGVSATAIAVHPGTVKTAIWGNVGGFGAAYLVVIKDILFLEPDDGAFPVLYAATAP 971
N+G+G A L Q G VVM RN K E G I P G ++ M DL DL+SV F DF+ +F+RLD+L+N+AG +P G + ++ F LG F LT L+D++ T ARV+NLSS+ HRFG +++ L W GR P Y +KLA L+FT EL+RR ++AG + A+A HPG T + G G + ++ + GA P +YAATAP
Sbjct: 98 NSGLGYETARALAQHGATVVMACRNAQKAEAAAGRILATGPRG-----KVIPMSLDLGDLDSVRAFADDFKGRFERLDLLVNNAGIMVPPQGETAQGFETQFGVNHLGHFALTAQLIDVLNATPDARVVNLSSIAHRFGKIEFDD--LNWKGR------EYKPMP-AYGQSKLANLLFTYELQRRLQAAGKTTVAVAAHPGYAATGLQGEGMNDG------LMGLIAQTQEMGALPSMYAATAP 321 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig558.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig558.2.1 >prot_P-wetherbeei_contig558.2.1 ID=prot_P-wetherbeei_contig558.2.1|Name=mRNA_P-wetherbeei_contig558.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=363bp MRREHCLFTRFDELQLNAGIGTRAAGRLVQRGYHVVMTTRNKTKGERVFGback to top mRNA from alignment at P-wetherbeei_contig558:3778..7492+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig558.2.1 ID=mRNA_P-wetherbeei_contig558.2.1|Name=mRNA_P-wetherbeei_contig558.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3715bp|location=Sequence derived from alignment at P-wetherbeei_contig558:3778..7492+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig558:3778..7492+ >mRNA_P-wetherbeei_contig558.2.1 ID=mRNA_P-wetherbeei_contig558.2.1|Name=mRNA_P-wetherbeei_contig558.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1089bp|location=Sequence derived from alignment at P-wetherbeei_contig558:3778..7492+ (Phaeothamnion wetherbeei SAG_119_79)back to top |