mRNA_P-wetherbeei_contig55764.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig55764.1.1
Unique NamemRNA_P-wetherbeei_contig55764.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig55764.1.1 vs. uniprot
Match: A0A6H5KVD1_9PHAE (UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD1_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 3.380e-21
Identity = 43/68 (63.24%), Postives = 53/68 (77.94%), Query Frame = 1 
Query:    1 QRKTFMRLFSKFSQHRNRPVVDWARVEAPPPAIVIHSGDIAPCPKDQALRHELLDKMVILKLNGACGS 204
            QRK F+RLF +F Q R +P ++WAR+E PP   ++ + DI PCPKDQALRHELLDKMVILKLNG  G+
Sbjct:   49 QRKGFLRLFGQFVQQRQKPALEWARLEPPPREAMVQATDIPPCPKDQALRHELLDKMVILKLNGGLGT 116
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BLAST of mRNA_P-wetherbeei_contig55764.1.1 vs. uniprot
Match: D7FKF0_ECTSI (UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKF0_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 3.790e-21
Identity = 43/68 (63.24%), Postives = 53/68 (77.94%), Query Frame = 1 
Query:    1 QRKTFMRLFSKFSQHRNRPVVDWARVEAPPPAIVIHSGDIAPCPKDQALRHELLDKMVILKLNGACGS 204
            QRK F+RLF +F Q R +P ++WAR+E PP   ++ + DI PCPKDQALRHELLDKMVILKLNG  G+
Sbjct:   38 QRKGFLRLFGQFVQQRQKPALEWARLEPPPREAMVQATDIPPCPKDQALRHELLDKMVILKLNGGLGT 105
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BLAST of mRNA_P-wetherbeei_contig55764.1.1 vs. uniprot
Match: A0A6A4Z306_9STRA (UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z306_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.100e-15
Identity = 36/68 (52.94%), Postives = 46/68 (67.65%), Query Frame = 1 
Query:    1 QRKTFMRLFSKFSQHRNRPVVDWARVEAPPPAIVIHSGDIAPCPKDQALRHELLDKMVILKLNGACGS 204
            QRK FM+LF K+   +  P+ DW  V  PPP +VI+S  +  CP D  L+HELLDK+VILKLNG  G+
Sbjct:   32 QRKGFMKLFRKYCSSKKSPI-DWKVVHPPPPGMVINSNSVEACPNDAGLKHELLDKLVILKLNGGLGT 98
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BLAST of mRNA_P-wetherbeei_contig55764.1.1 vs. uniprot
Match: A0A836CA96_9STRA (UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA96_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.990e-15
Identity = 40/68 (58.82%), Postives = 50/68 (73.53%), Query Frame = 1 
Query:    1 QRKTFMRLFSKFSQHRNRPVVDWARVEAPPPAIVIHSGDIAPCPKDQALRHELLDKMVILKLNGACGS 204
            QRK FM+LFS   Q R+ P +  A+V+ PPP ++I+  DI  CP DQALRHELLDK+VILKLNG  G+
Sbjct:   66 QRKGFMQLFSAHCQTRSCPAIVPAKVQHPPPEMLINLEDIPECPGDQALRHELLDKVVILKLNGGLGT 133
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BLAST of mRNA_P-wetherbeei_contig55764.1.1 vs. uniprot
Match: A0A3R7Y453_9STRA (Alkaline phosphatase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7Y453_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 7.120e-15
Identity = 36/68 (52.94%), Postives = 46/68 (67.65%), Query Frame = 1 
Query:    1 QRKTFMRLFSKFSQHRNRPVVDWARVEAPPPAIVIHSGDIAPCPKDQALRHELLDKMVILKLNGACGS 204
            QRK FM+LF K+   +  P+ DW  V  PPP +VI+S  +  CP D  L+HELLDK+VILKLNG  G+
Sbjct:  583 QRKGFMKLFRKYCSSKKSPI-DWKVVHPPPPGMVINSNSVEACPNDAGLKHELLDKLVILKLNGGLGT 649
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BLAST of mRNA_P-wetherbeei_contig55764.1.1 vs. uniprot
Match: K3X633_GLOUD (UTP--glucose-1-phosphate uridylyltransferase n=9 Tax=Oomycota TaxID=4762 RepID=K3X633_GLOUD)

HSP 1 Score: 74.3 bits (181), Expect = 8.320e-14
Identity = 34/68 (50.00%), Postives = 48/68 (70.59%), Query Frame = 1 
Query:    1 QRKTFMRLFSKFSQHRNRPVVDWARVEAPPPAIVIHSGDIAPCPKDQALRHELLDKMVILKLNGACGS 204
            QRK F++LF K+ +H+ + V+DW  V+ P P I++ S  +  CP D  L+HELLDK+VILKLNG  G+
Sbjct:   32 QRKNFLKLFRKYVKHK-KDVIDWNAVKPPTPDILLPSSSLESCPNDMNLKHELLDKLVILKLNGGLGT 98
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BLAST of mRNA_P-wetherbeei_contig55764.1.1 vs. uniprot
Match: A0A024UP01_9STRA (UTP--glucose-1-phosphate uridylyltransferase n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024UP01_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.550e-13
Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = 1 
Query:    1 QRKTFMRLFSKFSQHRNRPVVDWARVEAPPPAIVIHSGDIAPCPKDQALRHELLDKMVILKLNGACGS 204
            QRK FM+LF K+   +  P+ DW  V  PP  +VI+S  +  CP D +L+HELLDK+VILKLNG  G+
Sbjct:   32 QRKGFMKLFRKYCSSKKSPI-DWKVVNPPPVDMVINSSSVEACPNDASLKHELLDKLVILKLNGGLGT 98
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BLAST of mRNA_P-wetherbeei_contig55764.1.1 vs. uniprot
Match: A0A024TUQ7_9STRA (ABC transmembrane type-1 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TUQ7_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.570e-13
Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = 1 
Query:    1 QRKTFMRLFSKFSQHRNRPVVDWARVEAPPPAIVIHSGDIAPCPKDQALRHELLDKMVILKLNGACGS 204
            QRK FM+LF K+   +  P+ DW  V  PP  +VI+S  +  CP D +L+HELLDK+VILKLNG  G+
Sbjct:  406 QRKGFMKLFRKYCSSKKSPI-DWKVVNPPPVDMVINSSSVEACPNDASLKHELLDKLVILKLNGGLGT 472
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BLAST of mRNA_P-wetherbeei_contig55764.1.1 vs. uniprot
Match: A0A485LCW4_9STRA (UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LCW4_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 3.940e-13
Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = 1 
Query:    1 QRKTFMRLFSKFSQHRNRPVVDWARVEAPPPAIVIHSGDIAPCPKDQALRHELLDKMVILKLNGACGS 204
            QRK FM+LF K+S  +  P+ DW  V  P   +VI+S  +  CP D +L+HELLDK+VILKLNG  G+
Sbjct:   15 QRKGFMKLFRKYSASKKSPI-DWKLVTPPSADMVINSASVEACPNDASLKHELLDKLVILKLNGGLGT 81
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BLAST of mRNA_P-wetherbeei_contig55764.1.1 vs. uniprot
Match: W7UC11_9STRA (UTP--glucose-1-phosphate uridylyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UC11_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 7.450e-13
Identity = 37/75 (49.33%), Postives = 46/75 (61.33%), Query Frame = 1 
Query:    1 QRKTFMRLFSKFSQHRNRPVVDWARVEAPPPAIVIHSGDIAPCPKDQALRHELLDKMVILKLNGACGSLSLAVLP 225
            QRK FM+LF KF + R RP +DW +VE  P   ++          DQA+RHELLDK+VILKLNG  G+     LP
Sbjct:   40 QRKNFMKLFGKFLESRTRPSLDWTQVEQVPSEQLMDXXXXXXXXXDQAVRHELLDKLVILKLNGGLGTRMGCTLP 114
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55764.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVD1_9PHAE3.380e-2163.24UTP--glucose-1-phosphate uridylyltransferase n=1 T... [more]
D7FKF0_ECTSI3.790e-2163.24UTP--glucose-1-phosphate uridylyltransferase n=1 T... [more]
A0A6A4Z306_9STRA1.100e-1552.94UTP--glucose-1-phosphate uridylyltransferase n=1 T... [more]
A0A836CA96_9STRA1.990e-1558.82UTP--glucose-1-phosphate uridylyltransferase n=1 T... [more]
A0A3R7Y453_9STRA7.120e-1552.94Alkaline phosphatase n=1 Tax=Aphanomyces astaci Ta... [more]
K3X633_GLOUD8.320e-1450.00UTP--glucose-1-phosphate uridylyltransferase n=9 T... [more]
A0A024UP01_9STRA1.550e-1351.47UTP--glucose-1-phosphate uridylyltransferase n=5 T... [more]
A0A024TUQ7_9STRA1.570e-1351.47ABC transmembrane type-1 domain-containing protein... [more]
A0A485LCW4_9STRA3.940e-1351.47UTP--glucose-1-phosphate uridylyltransferase n=1 T... [more]
W7UC11_9STRA7.450e-1349.33UTP--glucose-1-phosphate uridylyltransferase n=2 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig55764contigP-wetherbeei_contig55764:186..413 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FKF0
Preferred nameUGP2
PFAMsUDPGP
Model size228
Max annot lvl2759|Eukaryota
KEGG rclassRC00002
KEGG koko:K00963,ko:K02987,ko:K17260,ko:K17491
KEGG ReactionR00289
KEGG Pathwayko00040,ko00052,ko00500,ko00520,ko01100,ko01130,ko03010,ko04138,ko04212,ko04530,ko04922,map00040,map00052,map00500,map00520,map01100,map01130,map03010,map04138,map04212,map04530,map04922
KEGG ModuleM00129,M00177,M00179,M00361,M00362,M00549
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000271,GO:0003674,GO:0003824,GO:0003983,GO:0005488,GO:0005515,GO:0005536,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0005984,GO:0005985,GO:0005991,GO:0005992,GO:0006011,GO:0006065,GO:0006073,GO:0006077,GO:0006078,GO:0006082,GO:0006091,GO:0006112,GO:0006139,GO:0006464,GO:0006486,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0007154,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009226,GO:0009250,GO:0009267,GO:0009277,GO:0009311,GO:0009312,GO:0009555,GO:0009605,GO:0009628,GO:0009651,GO:0009986,GO:0009987,GO:0009991,GO:0010035,GO:0010038,GO:0010494,GO:0010941,GO:0010942,GO:0015980,GO:0016020,GO:0016036,GO:0016043,GO:0016051,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019103,GO:0019255,GO:0019438,GO:0019538,GO:0019637,GO:0019752,GO:0030246,GO:0030312,GO:0030445,GO:0030587,GO:0031154,GO:0031667,GO:0031668,GO:0031669,GO:0032501,GO:0032502,GO:0032553,GO:0032557,GO:0032991,GO:0033036,GO:0033037,GO:0033554,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036094,GO:0036211,GO:0036296,GO:0036464,GO:0042221,GO:0042545,GO:0042594,GO:0042802,GO:0042995,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0043413,GO:0043436,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045229,GO:0046351,GO:0046394,GO:0046398,GO:0046483,GO:0046686,GO:0048029,GO:0048229,GO:0048518,GO:0048522,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051273,GO:0051274,GO:0051641,GO:0051703,GO:0051704,GO:0051716,GO:0051748,GO:0052386,GO:0052543,GO:0052545,GO:0055086,GO:0055093,GO:0055114,GO:0065007,GO:0070085,GO:0070482,GO:0070569,GO:0070727,GO:0071496,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0090406,GO:0090702,GO:0097159,GO:0097367,GO:0099120,GO:0120025,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
Exons1
Evalue7.77e-20
EggNOG OGsCOG4284@1|root,KOG2638@2759|Eukaryota
EC2.7.7.9
DescriptionUTP:glucose-1-phosphate uridylyltransferase activity
Cds size213
COG categoryG
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko01009,ko03011,ko03400,ko04131,ko04147,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186829.9179087-CDS-P-wetherbeei_contig55764:185..3981683186829.9179087-CDS-P-wetherbeei_contig55764:185..398Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig55764 186..398 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186829.9333036-UTR-P-wetherbeei_contig55764:398..4131683186829.9333036-UTR-P-wetherbeei_contig55764:398..413Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig55764 399..413 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig55764.1.1prot_P-wetherbeei_contig55764.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig55764 186..398 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig55764.1.1

>prot_P-wetherbeei_contig55764.1.1 ID=prot_P-wetherbeei_contig55764.1.1|Name=mRNA_P-wetherbeei_contig55764.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=71bp
MRLFSKFSQHRNRPVVDWARVEAPPPAIVIHSGDIAPCPKDQALRHELLD
KMVILKLNGACGSLSLAVLP*
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mRNA from alignment at P-wetherbeei_contig55764:186..413-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig55764.1.1 ID=mRNA_P-wetherbeei_contig55764.1.1|Name=mRNA_P-wetherbeei_contig55764.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=228bp|location=Sequence derived from alignment at P-wetherbeei_contig55764:186..413- (Phaeothamnion wetherbeei SAG_119_79)
CAGAGAAAAACATTCATGCGGCTCTTCAGTAAGTTCAGCCAGCACCGCAA
CCGCCCAGTGGTGGATTGGGCGCGCGTGGAGGCGCCGCCACCTGCGATTG
TCATTCATTCGGGAGATATTGCTCCGTGTCCGAAGGACCAGGCATTGCGG
CACGAACTGCTCGACAAGATGGTCATTTTGAAGCTTAACGGTGCGTGCGG
TTCTCTTTCTTTGGCGGTTCTGCCCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig55764:186..413-

>mRNA_P-wetherbeei_contig55764.1.1 ID=mRNA_P-wetherbeei_contig55764.1.1|Name=mRNA_P-wetherbeei_contig55764.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=213bp|location=Sequence derived from alignment at P-wetherbeei_contig55764:186..413- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGGCTCTTCAGTAAGTTCAGCCAGCACCGCAACCGCCCAGTGGTGGA
TTGGGCGCGCGTGGAGGCGCCGCCACCTGCGATTGTCATTCATTCGGGAG
ATATTGCTCCGTGTCCGAAGGACCAGGCATTGCGGCACGAACTGCTCGAC
AAGATGGTCATTTTGAAGCTTAACGGTGCGTGCGGTTCTCTTTCTTTGGC
GGTTCTGCCCTGA
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