mRNA_P-wetherbeei_contig5570.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5570.2.1 vs. uniprot
Match: A0A835ZBM9_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBM9_9STRA) HSP 1 Score: 137 bits (346), Expect = 7.490e-37 Identity = 74/120 (61.67%), Postives = 90/120 (75.00%), Query Frame = 1
Query: 34 SVASLHEFHAASADIARGIHVTSQQLSQLTKLVQRRGLFNDPADDINTLVHSIKEGIQGLNGQLDSTQAYVEHQRRKLGQ----QPANHSAHVVGQLKTELMETTKAFKDVLQQRSLNLK 381
SV++L EFH A++ IA+ IHVTSQ+LSQLTKLVQ RGLFNDPA +IN LVH IK+ IQG+N QLD Q YV+ ++ ++ Q ANHS +VVGQLK EL+ TK FKDVLQ RS LK
Sbjct: 31 SVSTLSEFHGATSSIAKEIHVTSQKLSQLTKLVQSRGLFNDPAQEINELVHDIKQDIQGINTQLDQAQTYVDSRKTQMAGGAQGQHANHSINVVGQLKAELLNATKTFKDVLQVRSSKLK 150
BLAST of mRNA_P-wetherbeei_contig5570.2.1 vs. uniprot
Match: D8LIS8_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIS8_ECTSI) HSP 1 Score: 131 bits (329), Expect = 3.670e-34 Identity = 68/117 (58.12%), Postives = 91/117 (77.78%), Query Frame = 1
Query: 37 VASLHEFHAASADIARGIHVTSQQLSQLTKLVQRRGLFNDPADDINTLVHSIKEGIQGLNGQLDSTQAYVEHQRRKLGQ--QPANHSAHVVGQLKTELMETTKAFKDVLQQRSLNLK 381
V++L EFH+A++ IA+ IH SQ+L LTKLVQ+RGLFNDP +IN+LVH IK+ +Q LN +LD++Q YV +++++G Q ANHS +VVGQLK EL+ T K FK+VLQQRS NLK
Sbjct: 48 VSTLGEFHSAASSIAKSIHKVSQKLEHLTKLVQQRGLFNDPVAEINSLVHVIKQEMQDLNTELDASQTYVNRRKQEMGDRNQAANHSVNVVGQLKMELINTAKTFKNVLQQRSNNLK 164
BLAST of mRNA_P-wetherbeei_contig5570.2.1 vs. uniprot
Match: A0A7S2EHX4_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EHX4_TRICV) HSP 1 Score: 102 bits (253), Expect = 3.460e-25 Identity = 57/113 (50.44%), Postives = 77/113 (68.14%), Query Frame = 1
Query: 55 FHAASADIARGIHVTSQQLSQLTKLVQRRGLFNDPADDINTLVHSIKEGIQGLNGQLDSTQAYVEHQRRKLGQ--QPANHSAHVVGQLKTELMETTKAFKDVLQQRSLNLKVS 387
FHAA++DI+R I TS LS+LT LV+RR LF D + +N LV IK I+GLNG+LD + HQ+R+LG+ Q ++++VGQL+ E T FK+VLQQRS NLKV+
Sbjct: 3 FHAAASDISRDIAATSALLSELTHLVRRRTLFVDDTERVNWLVLRIKSNIEGLNGRLDEAGDVIAHQKRRLGRNSQAGQEASNLVGQLREEFARATTGFKNVLQQRSDNLKVA 115
BLAST of mRNA_P-wetherbeei_contig5570.2.1 vs. uniprot
Match: A0A7S3M790_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M790_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.950e-23 Identity = 49/112 (43.75%), Postives = 78/112 (69.64%), Query Frame = 1
Query: 55 FHAASADIARGIHVTSQQLSQLTKLVQRRGLFNDPADDINTLVHSIKEGIQGLNGQLDSTQAYVEHQRRKLGQ---QPANHSAHVVGQLKTELMETTKAFKDVLQQRSLNLK 381
F+ A++++A+G+H TS L++LT LV+R+GLF+DP D+IN+L+ IK+ + LN + DS Q Y++ ++ G+ Q +NH+ VV LKT+LM TK FK +L+ RS +K
Sbjct: 35 FNEAASEVAKGVHKTSALLTKLTNLVRRQGLFDDPTDEINSLIFRIKQDLDDLNAKCDSAQQYIDSKKSMFGESKDQSSNHNKQVVNHLKTDLMHATKGFKTILEVRSSKMK 146
BLAST of mRNA_P-wetherbeei_contig5570.2.1 vs. uniprot
Match: A0A482S9F5_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S9F5_9ARCH) HSP 1 Score: 95.1 bits (235), Expect = 5.200e-22 Identity = 52/113 (46.02%), Postives = 74/113 (65.49%), Query Frame = 1
Query: 52 EFHAASADIARGIHVTSQQLSQLTKLVQRRGLFNDPADDINTLVHSIKEGIQGLNGQLDSTQAYVEHQR---RKLGQQPANHSAHVVGQLKTELMETTKAFKDVLQQRSLNLK 381
EF+ + +DIARGIH TS L +L+ LV+++GLF+DP ++IN+L+H IK+ + LN + D+ Q V+ Q+ Q H + VV LKTELM TTK FK VL+ RS +K
Sbjct: 37 EFNESVSDIARGIHRTSSLLIKLSNLVKKQGLFDDPTEEINSLIHHIKQDLDDLNSRCDTAQNAVDGQKGFFTSEATQSTQHHSKVVSGLKTELMTTTKDFKSVLELRSTKMK 149
BLAST of mRNA_P-wetherbeei_contig5570.2.1 vs. uniprot
Match: A0A0P1A9G2_PLAHL (Syntaxin-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A9G2_PLAHL) HSP 1 Score: 95.1 bits (235), Expect = 3.510e-21 Identity = 48/116 (41.38%), Postives = 79/116 (68.10%), Query Frame = 1
Query: 52 EFHAASADIARGIHVTSQQLSQLTKLVQRRGLFNDPADDINTLVHSIKEGIQGLNGQLDSTQAYVEHQRRKL-GQQPANHSAHVVGQLKTELMETTKAFKDVLQQRSLNLKVSNAK 396
+F+AA++DI++ ++ S++L QLT+LV++ +FNDP D IN L +K+ I +N QLD+ Q Y++ +R+ +Q A HS VV +K+ LM TTK FKD+L+ R N+K+ ++
Sbjct: 38 QFNAAASDISKEVYQASKRLQQLTQLVRQNNMFNDPTDAINELAALVKKDITDINMQLDNLQEYIDSKRQSATSRQAARHSDAVVSLMKSNLMATTKGFKDILEVRQENMKLQQSR 153
BLAST of mRNA_P-wetherbeei_contig5570.2.1 vs. uniprot
Match: A0A5D6Y1T5_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1T5_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.220e-20 Identity = 48/112 (42.86%), Postives = 76/112 (67.86%), Query Frame = 1
Query: 52 EFHAASADIARGIHVTSQQLSQLTKLVQRRGLFNDPADDINTLVHSIKEGIQGLNGQLDSTQAYVEHQRRKLG-QQPANHSAHVVGQLKTELMETTKAFKDVLQQRSLNLKV 384
EF+AA++DI++ ++ S++L QLT+LV++ +FNDP + IN L +K+ I +N QLD+ Q Y+ +R G +Q A HS +V +K+ LM TTK FKD+L+ R N+K+
Sbjct: 41 EFNAAASDISKEVYQASKRLQQLTQLVRQNNMFNDPTETINELAALVKKDITDINAQLDNLQEYINSKRSANGSRQAATHSDAIVSLMKSNLMTTTKGFKDILEVRQENMKL 152
BLAST of mRNA_P-wetherbeei_contig5570.2.1 vs. uniprot
Match: K3X7D7_GLOUD (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7D7_GLOUD) HSP 1 Score: 94.4 bits (233), Expect = 1.550e-20 Identity = 48/112 (42.86%), Postives = 76/112 (67.86%), Query Frame = 1
Query: 52 EFHAASADIARGIHVTSQQLSQLTKLVQRRGLFNDPADDINTLVHSIKEGIQGLNGQLDSTQAYVEHQRRKLG-QQPANHSAHVVGQLKTELMETTKAFKDVLQQRSLNLKV 384
+F+AA++DI++ ++ SQ+L QLT+LV++ +FNDP + IN L +K+ I +N QLD+ Q Y+ +R G +Q A HS +V +K+ LM TTK FKD+L+ R N+K+
Sbjct: 41 QFNAAASDISKEVYQASQRLQQLTQLVRQNNMFNDPTEAINELAALVKKDITDINAQLDNLQEYINSKRSANGSKQAATHSDAIVSLMKSNLMVTTKGFKDILEVRQENMKL 152
BLAST of mRNA_P-wetherbeei_contig5570.2.1 vs. uniprot
Match: A0A3M6VV92_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VV92_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 2.970e-19 Identity = 45/116 (38.79%), Postives = 78/116 (67.24%), Query Frame = 1
Query: 52 EFHAASADIARGIHVTSQQLSQLTKLVQRRGLFNDPADDINTLVHSIKEGIQGLNGQLDSTQAYVEHQRRKL-GQQPANHSAHVVGQLKTELMETTKAFKDVLQQRSLNLKVSNAK 396
+F+AA++DI++ ++ S++L QLT+LV++ +FNDP + IN L +K+ I +N QLD+ Q Y+ +R+ +Q A HS +V +K+ LM TT+ FKD+L+ R N+K+ ++
Sbjct: 38 QFNAAASDISKEVYQASKRLQQLTRLVRQNNMFNDPTEAINELAALVKKDITDINMQLDNLQEYMNSKRQSAPSRQAAKHSDAIVSLMKSNLMATTRGFKDILEVRQENMKLQQSR 153
BLAST of mRNA_P-wetherbeei_contig5570.2.1 vs. uniprot
Match: A0A421GD73_9STRA (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GD73_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 3.200e-19 Identity = 45/116 (38.79%), Postives = 78/116 (67.24%), Query Frame = 1
Query: 52 EFHAASADIARGIHVTSQQLSQLTKLVQRRGLFNDPADDINTLVHSIKEGIQGLNGQLDSTQAYVEHQRRKL-GQQPANHSAHVVGQLKTELMETTKAFKDVLQQRSLNLKVSNAK 396
+F+AA++DI++ ++ S++L QLT+LV++ +FNDP + IN L +K+ I +N QLD+ Q Y+ +R+ +Q A HS +V +K+ LM TT+ FKD+L+ R N+K+ ++
Sbjct: 38 QFNAAASDISKEVYQASKRLQQLTQLVRQNNMFNDPTEAINELAALVKKDITDINMQLDNLQEYINSKRQSAPSRQAAKHSDAIVSLMKSNLMVTTRGFKDILEVRQENMKLQQSR 153 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5570.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5570.2.1 >prot_P-wetherbeei_contig5570.2.1 ID=prot_P-wetherbeei_contig5570.2.1|Name=mRNA_P-wetherbeei_contig5570.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=134bp GGPALSASAPASVASLHEFHAASADIARGIHVTSQQLSQLTKLVQRRGLFback to top mRNA from alignment at P-wetherbeei_contig5570:2613..3749+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5570.2.1 ID=mRNA_P-wetherbeei_contig5570.2.1|Name=mRNA_P-wetherbeei_contig5570.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1137bp|location=Sequence derived from alignment at P-wetherbeei_contig5570:2613..3749+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5570:2613..3749+ >mRNA_P-wetherbeei_contig5570.2.1 ID=mRNA_P-wetherbeei_contig5570.2.1|Name=mRNA_P-wetherbeei_contig5570.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=402bp|location=Sequence derived from alignment at P-wetherbeei_contig5570:2613..3749+ (Phaeothamnion wetherbeei SAG_119_79)back to top |