mRNA_P-wetherbeei_contig55549.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig55549.1.1
Unique NamemRNA_P-wetherbeei_contig55549.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig55549.1.1 vs. uniprot
Match: A0A127ESF4_9HYPH (Flavin-dependent alkanal monooxygenase n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127ESF4_9HYPH)

HSP 1 Score: 289 bits (739), Expect = 2.480e-95
Identity = 137/173 (79.19%), Postives = 153/173 (88.44%), Query Frame = 1
Query:    1 VEHYFKPYGGYSPNPLLFLTAASQRTKTARMITGAVLPAFNNPLKLAGEIGMLDGISGGRLEVGFARAFLPHEFTAFGISLDESRRRFTEGLAQVRLLLEQENVTSEGEFHSFKNVTSLPRPTQKPRPPFWIAATTTPETFEFAGKAGCKLMGIPLEPEKMRNLIGIYRDAWR 519
            VEHYF PYGGYSPNPL+FLTAA+  TK  R+ITGAVLPAFN PLKLAGEIGMLDGIS GR+EVGFARAFLPHEFT FG+SLDESR+RFTEGLAQ+ +LL+ E V+S+GEF+SF NVTSLPRP Q+P PPFWIAATTTPETF FAG  GC +M IPLEPEKMR+LIG YR+AWR
Sbjct:   43 VEHYFHPYGGYSPNPLIFLTAAAMVTKKTRLITGAVLPAFNKPLKLAGEIGMLDGISNGRVEVGFARAFLPHEFTQFGVSLDESRKRFTEGLAQITMLLKGEKVSSKGEFNSFTNVTSLPRPMQRPHPPFWIAATTTPETFAFAGANGCNVMAIPLEPEKMRSLIGTYREAWR 215          
BLAST of mRNA_P-wetherbeei_contig55549.1.1 vs. uniprot
Match: K9WEF1_9CYAN (Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase n=1 Tax=Allocoleopsis franciscana PCC 7113 TaxID=1173027 RepID=K9WEF1_9CYAN)

HSP 1 Score: 276 bits (705), Expect = 4.010e-90
Identity = 135/173 (78.03%), Postives = 148/173 (85.55%), Query Frame = 1
Query:    1 VEHYFKPYGGYSPNPLLFLTAASQRTKTARMITGAVLPAFNNPLKLAGEIGMLDGISGGRLEVGFARAFLPHEFTAFGISLDESRRRFTEGLAQVRLLLEQENVTSEGEFHSFKNVTSLPRPTQKPRPPFWIAATTTPETFEFAGKAGCKLMGIPLEPEKMRNLIGIYRDAWR 519
            VEHYF PYGGYSPNP+LFLTAASQRT+ AR+ITGAVLPAFNNPLKLAGEIGMLD IS GRLEVGFARAFLPHEF  FG+SL+ESR RF EG+ QVR LLE+ENV+ EG+FHSFKNVTSLPRPTQ PRPPFWIAA  TPE+F  AGK G  LM IPL   KM  LIG+YR+AW+
Sbjct:   43 VEHYFHPYGGYSPNPILFLTAASQRTRKARLITGAVLPAFNNPLKLAGEIGMLDAISQGRLEVGFARAFLPHEFVRFGVSLNESRGRFEEGVEQVRRLLEEENVSIEGQFHSFKNVTSLPRPTQAPRPPFWIAALATPESFVAAGKKGYGLMAIPLAGGKMAELIGMYREAWK 215          
BLAST of mRNA_P-wetherbeei_contig55549.1.1 vs. uniprot
Match: A0A6P0WZA1_9CYAN (LLM class flavin-dependent oxidoreductase n=2 Tax=Oscillatoriales TaxID=1150 RepID=A0A6P0WZA1_9CYAN)

HSP 1 Score: 274 bits (700), Expect = 2.360e-89
Identity = 131/173 (75.72%), Postives = 146/173 (84.39%), Query Frame = 1
Query:    1 VEHYFKPYGGYSPNPLLFLTAASQRTKTARMITGAVLPAFNNPLKLAGEIGMLDGISGGRLEVGFARAFLPHEFTAFGISLDESRRRFTEGLAQVRLLLEQENVTSEGEFHSFKNVTSLPRPTQKPRPPFWIAATTTPETFEFAGKAGCKLMGIPLEPEKMRNLIGIYRDAWR 519
            VEHYF PYGGYSPNP++FLTAA QRTK ARM+TGAVLPAFNNPLKLAGEI MLD ISGGRLEVGFARAFLPHEF  FG+SL ES+ RF EG+ QVR LLE+ENVT EG+FHSFKNVTSLPRPTQ+PRPPFWIAA  TP +F  AG+ G  +M IPL   KM  LIG+YR+AW+
Sbjct:   43 VEHYFHPYGGYSPNPIIFLTAACQRTKQARMVTGAVLPAFNNPLKLAGEIAMLDAISGGRLEVGFARAFLPHEFARFGVSLSESKARFAEGIQQVRSLLEEENVTMEGQFHSFKNVTSLPRPTQQPRPPFWIAALATPSSFITAGEQGYGIMAIPLAGGKMAELIGLYREAWK 215          
BLAST of mRNA_P-wetherbeei_contig55549.1.1 vs. uniprot
Match: A0A6P0QMH3_9CYAN (LLM class flavin-dependent oxidoreductase n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=A0A6P0QMH3_9CYAN)

HSP 1 Score: 271 bits (693), Expect = 3.260e-88
Identity = 133/173 (76.88%), Postives = 146/173 (84.39%), Query Frame = 1
Query:    1 VEHYFKPYGGYSPNPLLFLTAASQRTKTARMITGAVLPAFNNPLKLAGEIGMLDGISGGRLEVGFARAFLPHEFTAFGISLDESRRRFTEGLAQVRLLLEQENVTSEGEFHSFKNVTSLPRPTQKPRPPFWIAATTTPETFEFAGKAGCKLMGIPLEPEKMRNLIGIYRDAWR 519
            VEHYF PYGGYSPNP++FLTAASQRT+ AR+ITGAVLPAFN+ LKLAGEIGMLD IS GRLEVGFARAFLPHEF  FG+SL ESR RF EG+ QVR LLE+E+VT EG+FHSFKNVTSLPRPTQK RPPFWIAA  TPE+F  AGK G  LM IPL   KM  LIG+YRDAW+
Sbjct:   43 VEHYFHPYGGYSPNPIVFLTAASQRTRKARLITGAVLPAFNHSLKLAGEIGMLDAISNGRLEVGFARAFLPHEFVRFGVSLSESRARFEEGVEQVRRLLEEEDVTMEGQFHSFKNVTSLPRPTQKSRPPFWIAALATPESFIAAGKKGYGLMAIPLAGGKMAELIGLYRDAWK 215          
BLAST of mRNA_P-wetherbeei_contig55549.1.1 vs. uniprot
Match: A0A6M0BVX4_9CYAN (LLM class flavin-dependent oxidoreductase (Fragment) n=1 Tax=Okeania sp. SIO2H7 TaxID=2607802 RepID=A0A6M0BVX4_9CYAN)

HSP 1 Score: 266 bits (681), Expect = 7.110e-88
Identity = 129/173 (74.57%), Postives = 143/173 (82.66%), Query Frame = 1
Query:    1 VEHYFKPYGGYSPNPLLFLTAASQRTKTARMITGAVLPAFNNPLKLAGEIGMLDGISGGRLEVGFARAFLPHEFTAFGISLDESRRRFTEGLAQVRLLLEQENVTSEGEFHSFKNVTSLPRPTQKPRPPFWIAATTTPETFEFAGKAGCKLMGIPLEPEKMRNLIGIYRDAWR 519
            VEHYF PYGGYSPNP++FLTAASQRT+ AR+ITGAVLP FNNPLKLAGEIGMLD IS GRLEVGFARAFLPHEF  FGI L+ESR RFTEG+ QVR LLE ENV+ EG+FH F+NVTSLPRPTQ PRPPFWIA   TPE+F  AG+ G  +M IPL   KM  LI +YRDAW+
Sbjct:   43 VEHYFHPYGGYSPNPIVFLTAASQRTRKARLITGAVLPVFNNPLKLAGEIGMLDAISNGRLEVGFARAFLPHEFARFGIDLNESRARFTEGMEQVRCLLEAENVSMEGQFHRFENVTSLPRPTQAPRPPFWIACLATPESFVTAGERGYGVMAIPLAGGKMAELIKLYRDAWK 215          
BLAST of mRNA_P-wetherbeei_contig55549.1.1 vs. uniprot
Match: A0A6P0RSE2_9CYAN (LLM class flavin-dependent oxidoreductase n=4 Tax=unclassified Symploca TaxID=2620434 RepID=A0A6P0RSE2_9CYAN)

HSP 1 Score: 269 bits (688), Expect = 1.650e-87
Identity = 128/173 (73.99%), Postives = 146/173 (84.39%), Query Frame = 1
Query:    1 VEHYFKPYGGYSPNPLLFLTAASQRTKTARMITGAVLPAFNNPLKLAGEIGMLDGISGGRLEVGFARAFLPHEFTAFGISLDESRRRFTEGLAQVRLLLEQENVTSEGEFHSFKNVTSLPRPTQKPRPPFWIAATTTPETFEFAGKAGCKLMGIPLEPEKMRNLIGIYRDAWR 519
            VEHYF PYGGYSPNP++FLTAA Q TK ARM+TGAVLPAFNNPLKLAGEI MLD ISGGRLEVGFARAFLP+EF  FG+SL+ES+ RF EG+ QVR LLE+ENVT+EG+FHSFKNVTS PRPTQ+PRPPFWIAA  TP +F  AG+ G  +M IPL   KM  LIG+YR+AW+
Sbjct:   43 VEHYFHPYGGYSPNPIIFLTAACQHTKNARMVTGAVLPAFNNPLKLAGEIAMLDAISGGRLEVGFARAFLPNEFAQFGVSLNESKARFAEGIQQVRSLLEEENVTAEGQFHSFKNVTSFPRPTQQPRPPFWIAALATPSSFISAGEQGYGIMAIPLAGGKMAELIGLYREAWK 215          
BLAST of mRNA_P-wetherbeei_contig55549.1.1 vs. uniprot
Match: A0A3N6RF49_9CYAN (LLM class flavin-dependent oxidoreductase n=6 Tax=Okeania TaxID=1458928 RepID=A0A3N6RF49_9CYAN)

HSP 1 Score: 266 bits (681), Expect = 1.950e-86
Identity = 129/173 (74.57%), Postives = 143/173 (82.66%), Query Frame = 1
Query:    1 VEHYFKPYGGYSPNPLLFLTAASQRTKTARMITGAVLPAFNNPLKLAGEIGMLDGISGGRLEVGFARAFLPHEFTAFGISLDESRRRFTEGLAQVRLLLEQENVTSEGEFHSFKNVTSLPRPTQKPRPPFWIAATTTPETFEFAGKAGCKLMGIPLEPEKMRNLIGIYRDAWR 519
            VEHYF PYGGYSPNP++FLTAASQRT+ AR+ITGAVLP FNNPLKLAGEIGMLD IS GRLEVGFARAFLPHEF  FGI L+ESR RFTEG+ QVR LLE ENV+ EG+FH F+NVTSLPRPTQ PRPPFWIA   TPE+F  AG+ G  +M IPL   KM  LI +YRDAW+
Sbjct:   43 VEHYFHPYGGYSPNPIVFLTAASQRTRKARLITGAVLPVFNNPLKLAGEIGMLDAISNGRLEVGFARAFLPHEFARFGIDLNESRARFTEGMEQVRCLLEAENVSMEGQFHRFENVTSLPRPTQTPRPPFWIACLATPESFVTAGERGYGVMAIPLAGGKMAELIKLYRDAWK 215          
BLAST of mRNA_P-wetherbeei_contig55549.1.1 vs. uniprot
Match: W4L5Q4_9BACT (Bac_luciferase domain-containing protein n=3 Tax=Candidatus Entotheonella TaxID=93171 RepID=W4L5Q4_9BACT)

HSP 1 Score: 265 bits (678), Expect = 4.220e-86
Identity = 129/172 (75.00%), Postives = 144/172 (83.72%), Query Frame = 1
Query:    1 VEHYFKPYGGYSPNPLLFLTAASQRTKTARMITGAVLPAFNNPLKLAGEIGMLDGISGGRLEVGFARAFLPHEFTAFGISLDESRRRFTEGLAQVRLLLEQENVTSEGEFHSFKNVTSLPRPTQKPRPPFWIAATTTPETFEFAGKAGCKLMGIPLEPEKMRNLIGIYRDAW 516
            VEHYF PYGGYSPNP++FLTAA+ RT  AR+IT AVLPAFN+PLKLAGE+GMLD ISGGRLEVGFARAFLPHEF  FGIS+DESR RF EG+AQV LLLE ENVTS G FH+F+NVTSLPRPTQ PRPPFW+AA  TPE+FE AG+ G  +M IPL   +MR LI IYR AW
Sbjct:   43 VEHYFHPYGGYSPNPIVFLTAAAMRTAKARLITAAVLPAFNHPLKLAGELGMLDAISGGRLEVGFARAFLPHEFAHFGISMDESRARFDEGMAQVDLLLEGENVTSRGRFHTFENVTSLPRPTQVPRPPFWVAALATPESFERAGQNGYAVMAIPLAGGRMRELIQIYRQAW 214          
BLAST of mRNA_P-wetherbeei_contig55549.1.1 vs. uniprot
Match: A0A3M1SR21_9CYAN (LLM class flavin-dependent oxidoreductase n=1 Tax=Cyanobacteria bacterium J055 TaxID=2420338 RepID=A0A3M1SR21_9CYAN)

HSP 1 Score: 265 bits (677), Expect = 7.180e-86
Identity = 127/173 (73.41%), Postives = 144/173 (83.24%), Query Frame = 1
Query:    1 VEHYFKPYGGYSPNPLLFLTAASQRTKTARMITGAVLPAFNNPLKLAGEIGMLDGISGGRLEVGFARAFLPHEFTAFGISLDESRRRFTEGLAQVRLLLEQENVTSEGEFHSFKNVTSLPRPTQKPRPPFWIAATTTPETFEFAGKAGCKLMGIPLEPEKMRNLIGIYRDAWR 519
            VEHYF PYGGYSPNP++FLTAA+QRTK AR+ITGAVLPAFNNPLKLAGEIGMLD ISGGRLEVGFARAFLPHEF  FG++L+ESR RF EG+ QVR LLE+ENV   G+FH+F   TSLPRPTQKPRPP WIAA  TP++F  AG+ G  +M IPL   KM  LIG+YRDAW+
Sbjct:   43 VEHYFHPYGGYSPNPIVFLTAAAQRTKNARLITGAVLPAFNNPLKLAGEIGMLDAISGGRLEVGFARAFLPHEFERFGVNLNESRARFDEGVEQVRRLLEEENVAMVGQFHTFPETTSLPRPTQKPRPPLWIAALATPDSFRKAGENGYGVMAIPLAGGKMAELIGLYRDAWK 215          
BLAST of mRNA_P-wetherbeei_contig55549.1.1 vs. uniprot
Match: A0A1U7N5B8_9CYAN (Monooxygenase n=7 Tax=Moorena TaxID=1155738 RepID=A0A1U7N5B8_9CYAN)

HSP 1 Score: 263 bits (673), Expect = 2.340e-85
Identity = 127/173 (73.41%), Postives = 141/173 (81.50%), Query Frame = 1
Query:    1 VEHYFKPYGGYSPNPLLFLTAASQRTKTARMITGAVLPAFNNPLKLAGEIGMLDGISGGRLEVGFARAFLPHEFTAFGISLDESRRRFTEGLAQVRLLLEQENVTSEGEFHSFKNVTSLPRPTQKPRPPFWIAATTTPETFEFAGKAGCKLMGIPLEPEKMRNLIGIYRDAWR 519
            VEHYF  YGGYSPNP++FLTAASQRT+ AR+ITGAVLP FNNPLKLAGEIGMLDGIS GRLEVGFAR FLPHEF  FGI L+ESR RF EG+ QVR LLEQENVT EG+FH F+NVTSLPRPTQ PRPPFW+AA  TP +F  AG  G  +M IPL   KM  L+ +YRDAW+
Sbjct:   43 VEHYFHRYGGYSPNPIVFLTAASQRTRNARLITGAVLPVFNNPLKLAGEIGMLDGISNGRLEVGFARGFLPHEFARFGIDLNESRSRFEEGMEQVRCLLEQENVTMEGQFHRFENVTSLPRPTQTPRPPFWVAALATPASFVAAGHKGYGIMAIPLAGGKMAELLKLYRDAWK 215          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55549.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A127ESF4_9HYPH2.480e-9579.19Flavin-dependent alkanal monooxygenase n=1 Tax=Rho... [more]
K9WEF1_9CYAN4.010e-9078.03Flavin-dependent oxidoreductase, F420-dependent me... [more]
A0A6P0WZA1_9CYAN2.360e-8975.72LLM class flavin-dependent oxidoreductase n=2 Tax=... [more]
A0A6P0QMH3_9CYAN3.260e-8876.88LLM class flavin-dependent oxidoreductase n=2 Tax=... [more]
A0A6M0BVX4_9CYAN7.110e-8874.57LLM class flavin-dependent oxidoreductase (Fragmen... [more]
A0A6P0RSE2_9CYAN1.650e-8773.99LLM class flavin-dependent oxidoreductase n=4 Tax=... [more]
A0A3N6RF49_9CYAN1.950e-8674.57LLM class flavin-dependent oxidoreductase n=6 Tax=... [more]
W4L5Q4_9BACT4.220e-8675.00Bac_luciferase domain-containing protein n=3 Tax=C... [more]
A0A3M1SR21_9CYAN7.180e-8673.41LLM class flavin-dependent oxidoreductase n=1 Tax=... [more]
A0A1U7N5B8_9CYAN2.340e-8573.41Monooxygenase n=7 Tax=Moorena TaxID=1155738 RepID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig55549contigP-wetherbeei_contig55549:3..521 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1173027.Mic7113_2371
PFAMsBac_luciferase
Model size519
Max annot lvl1117|Cyanobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.57e-91
EggNOG OGsCOG2141@1|root,COG2141@2|Bacteria,1G2KI@1117|Cyanobacteria,1HDJK@1150|Oscillatoriales
DescriptionLuciferase-like monooxygenase
Cds size519
COG categoryC
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186827.194948-CDS-P-wetherbeei_contig55549:2..5211683186827.194948-CDS-P-wetherbeei_contig55549:2..521Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig55549 3..521 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig55549.1.1prot_P-wetherbeei_contig55549.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig55549 3..521 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig55549.1.1

>prot_P-wetherbeei_contig55549.1.1 ID=prot_P-wetherbeei_contig55549.1.1|Name=mRNA_P-wetherbeei_contig55549.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=173bp
VEHYFKPYGGYSPNPLLFLTAASQRTKTARMITGAVLPAFNNPLKLAGEI
GMLDGISGGRLEVGFARAFLPHEFTAFGISLDESRRRFTEGLAQVRLLLE
QENVTSEGEFHSFKNVTSLPRPTQKPRPPFWIAATTTPETFEFAGKAGCK
LMGIPLEPEKMRNLIGIYRDAWR
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mRNA from alignment at P-wetherbeei_contig55549:3..521-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig55549.1.1 ID=mRNA_P-wetherbeei_contig55549.1.1|Name=mRNA_P-wetherbeei_contig55549.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig55549:3..521- (Phaeothamnion wetherbeei SAG_119_79)
GTCGAGCACTACTTCAAGCCTTACGGCGGCTACAGCCCCAATCCCCTGCT GTTCCTGACCGCTGCCTCGCAGCGCACGAAAACGGCGCGGATGATCACCG GCGCGGTGCTGCCGGCATTCAACAACCCACTGAAGCTCGCGGGCGAGATC GGTATGCTCGACGGCATCAGCGGCGGACGCCTGGAGGTCGGCTTCGCGCG CGCGTTCTTGCCGCATGAGTTCACCGCCTTCGGCATCAGCCTCGACGAGA GCCGCCGCCGTTTCACCGAAGGGCTCGCGCAGGTGCGTCTGCTGCTCGAA CAGGAGAATGTGACGTCTGAGGGCGAATTCCATTCGTTCAAGAACGTCAC CTCGCTGCCGCGCCCGACGCAGAAGCCGCGGCCGCCGTTCTGGATTGCCG CCACCACCACGCCGGAGACGTTCGAATTCGCCGGCAAGGCCGGCTGCAAG CTGATGGGCATTCCGCTCGAGCCCGAGAAGATGCGCAATCTCATCGGCAT CTATCGCGACGCCTGGCGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig55549:3..521-

>mRNA_P-wetherbeei_contig55549.1.1 ID=mRNA_P-wetherbeei_contig55549.1.1|Name=mRNA_P-wetherbeei_contig55549.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig55549:3..521- (Phaeothamnion wetherbeei SAG_119_79)
GTCGAGCACTACTTCAAGCCTTACGGCGGCTACAGCCCCAATCCCCTGCT
GTTCCTGACCGCTGCCTCGCAGCGCACGAAAACGGCGCGGATGATCACCG
GCGCGGTGCTGCCGGCATTCAACAACCCACTGAAGCTCGCGGGCGAGATC
GGTATGCTCGACGGCATCAGCGGCGGACGCCTGGAGGTCGGCTTCGCGCG
CGCGTTCTTGCCGCATGAGTTCACCGCCTTCGGCATCAGCCTCGACGAGA
GCCGCCGCCGTTTCACCGAAGGGCTCGCGCAGGTGCGTCTGCTGCTCGAA
CAGGAGAATGTGACGTCTGAGGGCGAATTCCATTCGTTCAAGAACGTCAC
CTCGCTGCCGCGCCCGACGCAGAAGCCGCGGCCGCCGTTCTGGATTGCCG
CCACCACCACGCCGGAGACGTTCGAATTCGCCGGCAAGGCCGGCTGCAAG
CTGATGGGCATTCCGCTCGAGCCCGAGAAGATGCGCAATCTCATCGGCAT
CTATCGCGACGCCTGGCGC
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