mRNA_P-wetherbeei_contig5554.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5554.1.1
Unique NamemRNA_P-wetherbeei_contig5554.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5554.1.1 vs. uniprot
Match: D7FR28_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR28_ECTSI)

HSP 1 Score: 452 bits (1162), Expect = 9.020e-143
Identity = 224/415 (53.98%), Postives = 284/415 (68.43%), Query Frame = 1
Query:    1 PEKFANSPALRAKLKRLAEKRLLSRFVIDEAHCISQWGHDFRSDYLKLNLLRQEFPHVPIMALTATADRRIIKDAMSRLGFRNHNNLVSRSFNRPNLSYDVLPKSRGIVDAIADTVLKYPDDSGIIYCLSRADCQTVA----EKLREHEGVRKRGVSVDFYHAERTPREKEEVHREWSVGNVKVICATVAFGMGINKPDVRYVIHHSMPKSLTHFYQESGRAGRDGMEARCVVFFCFKDKNRLERMITKDRTVPYASQNEQLDNLWKCVDFCFNEVECRRKLLLEYFGESFDRAKCNKTCDNCCAMTDFDAEEKDCADAARAMLRLAESLTGLGARFTLNQLALLWRGQSVKPLARFDSHQLTGAGAGRAFSRAEADRVCQQACQKRFLEEFSVENGAN-----QFLTTYVRPGR 1218
            PEKF  SP++   L+RL  K LLSRFVIDEAHC+S WGHDFR DYLKL +LR++FP VPIMALTATA+  +  D + RL  RN   + + SFNRPNL Y++ PK   ++D IA  +  +P  SGI+YCLSR DC+ VA    +KL E  G  +    VDFYHA+RT  EK  VHREWS G + +ICAT+AFGMGINKPDVRYVIHHSMPK+LTHFYQESGRAGRDG++++C+VFF ++DK RLE M+ +D+++P+  +   L  ++KCV FC NEVECRR L+LE+FGE F R +C  TCDNC AM   + E KDC + A  +LRL+E +     R TL QL  +WRG SVK L +  + QL  AG+ +  ++ EA RV QQ     FLEE S + GA+      F   Y  PGR
Sbjct:  695 PEKFCRSPSMNKALQRLHSKGLLSRFVIDEAHCVSDWGHDFRPDYLKLGILRKDFPDVPIMALTATANTVVRDDTIRRLQLRNPT-VRTESFNRPNLKYEIRPKKAAVLDEIAKVMQSFPGQSGIVYCLSRKDCEKVASGLLKKLSETTGGHRGRFRVDFYHADRTAAEKARVHREWSAGRIHLICATIAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGLDSKCIVFFAYRDKARLENMVNRDKSLPFQRRQSNLQEVYKCVRFCINEVECRRVLILEFFGEHFPRGRCKATCDNCIAMQGCEKETKDCTEQAGRLLRLSEVMVEREIRHTLVQLVSVWRGDSVKTLDQRGARQLECAGSCKDMTKDEAIRVAQQMVLSSFLEEVSCDTGASGATGQAFTAAYCSPGR 1108          
BLAST of mRNA_P-wetherbeei_contig5554.1.1 vs. uniprot
Match: A0A836CQM3_9STRA (DNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQM3_9STRA)

HSP 1 Score: 415 bits (1066), Expect = 3.910e-132
Identity = 223/423 (52.72%), Postives = 279/423 (65.96%), Query Frame = 1
Query:    1 PEKFANSPALRAKLKRLAEKRLLSRFVIDEAHCISQWGHDFRSDYLKLNLLRQEFPHVPIMALTATADRRIIKDA-----MSRLGFRNHNNLVSRSFNRPNLSYDVLPKSRGIVDAIADTVLKYPDDSGIIYCLSRADCQTVAEKLREHEGVRKRGVSVDFYHAERTPR----EKEEVHREWSVGNVKVICATVAFGMGINKPDVRYVIHHSMPKSLTHFYQESGRAGRDGMEARCVVFFCFKDKNRLERMITKDRTVPYASQNEQLDNLWKCVDFCFNEVECRRKLLLEYFGESFDRAKCNKTCDNCCAMTD--FDAEEKDCADAARAMLRLAESLTGLGARFTLNQLALLWRGQSVKPLARF--DSHQLTGAGAGRAFSRAEADRVCQQACQKRFLEEFSVENGAN-----QFLTTYVRPG 1215
            PEK   S A++  L+RL E+ LLSRFVIDEAHC+S WGHDFR DYLKL+ LR+++P VPIMALTATAD++++ DA     + RLG R H  L  +SFNRPNL Y++  KS+ IV+ IA+ VL+YPD+SGI+YCLS+ +C+ V+EKL  HEG+R + + VDFYHAER P+    EK+  H EW++G  K+ICATVAFGMGINK DVRYVIHHS+PKSLTH YQESGRAGRDG  A C+VFF F DKNRL+ MITK                          VECRR LLL +FGE F RA+CN TCDNC A+     +A E +C    R +LRLA  L   G R TL  LA LWRG+    L      + +L   GAG  FS+AEA+R+ QQ     +L+E +VE G       +F  +YV+ G
Sbjct:  410 PEKLDKSGAIKQVLRRLYERGLLSRFVIDEAHCLSDWGHDFRPDYLKLDSLRRDYPKVPIMALTATADKKVMDDAXXXXXVRRLGLREHL-LHKQSFNRPNLEYEIRKKSKKIVEDIAEVVLRYPDESGIVYCLSKRECEVVSEKLNAHEGIRAKRIRVDFYHAERAPQASSSEKKRAHTEWTMGRTKLICATVAFGMGINKIDVRYVIHHSLPKSLTHLYQESGRAGRDGKRAECIVFFSFNDKNRLKNMITK--------------------------VECRRVLLLGHFGEPFQRARCNATCDNCRALAQGGCEAREVNCLQQGRELLRLATQLVLQGRRLTLMHLASLWRGEKHAGLKALLPAAEKLPDFGAGSGFSKAEAERMVQQMVLHHYLDEDTVETGNGGAGGLKFQASYVKRG 805          
BLAST of mRNA_P-wetherbeei_contig5554.1.1 vs. uniprot
Match: B8BWN4_THAPS (ATP-dependent DNA helicase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWN4_THAPS)

HSP 1 Score: 379 bits (972), Expect = 1.740e-124
Identity = 198/412 (48.06%), Postives = 273/412 (66.26%), Query Frame = 1
Query:    1 PEKFANSPALRAKLKRLAEKRLLSRFVIDEAHCISQWGHDFRSDYLKLNLLRQEFPHVPIMALTATADRRIIKDAMSRLGFRNHNNLVSRSFNRPNLSYDVLPKSRGIVDAIADTVLKYPDDSGIIYCLSRADCQTVAEKLREHEGVRKRG---VSVDFYHAERTPREKEEVHREWSVGNVKVICATVAFGMGINKPDVRYVIHHSMPKSLTHFYQESGRAGRDGMEARCVVFFCFKDKNRLERMITKDRTVPYASQN--EQLDNLWKCVDFCFNEVECRRKLLLEYFGESFDRAKCNKTCDNCCAMTDFDAEEKDCADAARAMLRLAESLTGLGARFTLNQLALLWRGQSVKPLARF-DSHQLTGAGAGRAFSRAEADRVCQQACQKRFLEEFSVENGANQFLTTYVRPGR 1218
            PEK A+S  ++  L  LA    +SRFV+DEAHC+S WGHDFR DY +L  LR+++P+VP+MALTATA+++++ DA+  LG RN  +  S SFNRPNL Y+V  K    VD IAD + +  +DSG+IYCLSR DC+T+++KL     +R++G   V V +YHAE   RE+ + H  WS+G++ V+CAT+AFGMGI+KPDVRYV+H+SMPKS+TH+YQESGRAGRDG  A C++F+ +KDK  LE MI K       SQ    ++D+L+ C+ +C N  ECRR L L++FGE F++ KCNKTCDNC        E++D  ++AR +L+L +S    G   TL+QLA LWRG   K   +F  +  L G G G+A S++E D +      +  +EE S E     F   YV PG+
Sbjct:   91 PEKLAHSNMIKGVLSNLANNGRISRFVVDEAHCLSDWGHDFRPDYNQLGCLRRDYPNVPLMALTATANKKVVSDAIRALGMRNEYSYRS-SFNRPNLHYEVRRKDNKTVDTIADYIAERRNDSGVIYCLSRKDCETLSDKLNNK--LREKGFRDVRVSYYHAELDQRERHQRHHAWSLGHISVLCATIAFGMGIDKPDVRYVMHYSMPKSITHYYQESGRAGRDGGNADCILFYAYKDKKTLEMMIRKAAGHNQRSQATLRKIDHLYTCLRYCENTFECRRTLQLQFFGEMFEKHKCNKTCDNC--RLGLVEEKRDMTNSAREILQLLDSR---GRGVTLHQLAELWRGTKSKAHTKFLITENLNGYGKGKAVSKSETDALVHAMVFEGVIEELSEETTGG-FAADYVHPGK 493          
BLAST of mRNA_P-wetherbeei_contig5554.1.1 vs. uniprot
Match: B7FSW6_PHATC (ATP-dependent DNA helicase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FSW6_PHATC)

HSP 1 Score: 363 bits (933), Expect = 8.490e-119
Identity = 184/392 (46.94%), Postives = 261/392 (66.58%), Query Frame = 1
Query:    1 PEKFANSPALRAKLKRLAEKRLLSRFVIDEAHCISQWGHDFRSDYLKLNLLRQEFPHVPIMALTATADRRIIKDAMSRLGFRNHNNLVSRSFNRPNLSYDVLPKSRGIVDAIADTVLKYPDDSGIIYCLSRADCQTVAEKLREHEGVRK--RGVSVDFYHAERTPREKEEVHREWSVGNVKVICATVAFGMGINKPDVRYVIHHSMPKSLTHFYQESGRAGRDGMEARCVVFFCFKDKNRLERMITKDRTVPYA-SQNEQLDNLWKCVDFCFNEVECRRKLLLEYFGESFDRAKCNKTCDNCCAMTDFDAEEKDCADAARAMLRLAESLTGLGAR-FTLNQLALLWRGQSVKPLARF-DSHQLTGAGAGRAFSRAEADRVCQQACQKRFLEE 1161
            PEK  NS  ++  ++RL  K L+SRFV+DEAHC+S WGHDFR DY++L+ +R+E+P+VP+MALTATA+ +++ DA+  LG +N     S SFNR NL Y+V  K    ++ IAD +   P +SG++YCLSR DC+  ++KL+E    R     + + FYHA+  P E+E+ HREWS G V V+CATVAFGMGI+KPDVRYVIH+SMPKS+TH+YQESGRAGRDG +A C++++ +KDK  LE +ITK    P++ +   Q+D L+ CV +C +   CRR + LE+FGE F+R KCNKTCDNC A    D   +D  + A+ ++ L   ++       TL+Q+  L+RG   +   +F D  +L G GAGR + + E D++      +R L E
Sbjct:  116 PEKLNNSTMIQNIIRRLCNKNLISRFVVDEAHCLSDWGHDFRPDYMRLDSVRREYPNVPLMALTATANEKVVNDAIRALGMKNEYRYQS-SFNRSNLHYEVRKKDGQTLEVIADYIASRPKESGVVYCLSRKDCEKTSQKLQEIARQRPGCNRIRISFYHADLDPHEREQRHREWSNGGVSVLCATVAFGMGIDKPDVRYVIHYSMPKSITHYYQESGRAGRDGDDADCILYYHYKDKKILENLITKSSKNPHSQTTRRQIDQLYGCVQYCEDLFRCRRTMQLEFFGEHFERGKCNKTCDNCKAGRTPD--RRDLTEDAKTIINLHTDVSKQKRNGTTLHQITELFRGSKSQAAVKFIDVKKLPGYGAGRNYKKFEIDKIVHALIFERTLVE 504          
BLAST of mRNA_P-wetherbeei_contig5554.1.1 vs. uniprot
Match: A0A7S4EMT8_9STRA (DNA helicase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EMT8_9STRA)

HSP 1 Score: 383 bits (983), Expect = 1.150e-118
Identity = 204/413 (49.39%), Postives = 280/413 (67.80%), Query Frame = 1
Query:    1 PEKFANSPALRAKLKRLAEKRLLSRFVIDEAHCISQWGHDFRSDYLKLNLLRQEFPHVPIMALTATADRRIIKDAMSRLGFRNHNNLVSRSFNRPNLSYDVLPKSRGIVDAIADTVLKYPDDSGIIYCLSRADCQTVAEKLREHEGVRKRG---VSVDFYHAERTPREKEEVHREWSVGNVKVICATVAFGMGINKPDVRYVIHHSMPKSLTHFYQESGRAGRDGMEARCVVFFCFKDKNRLERMI---TKDRTVPYASQNEQLDNLWKCVDFCFNEVECRRKLLLEYFGESFDRAKCNKTCDNCCAMTDFDAEEKDCADAARAMLRLAESLTGLGAR-FTLNQLALLWRGQSVKPLAR-FDSHQLTGAGAGRAFSRAEADRVCQQACQKRFLEEFSVENGANQFLTTYVRPG 1215
            PEK ++S  +++ L+RL  K L+SRF++DEAHC+S WGHDFR DY +L  LR+++P VP+MALTATA  +++ DA+  LG RN     S SFNRPNL Y+V  K   + DAIAD V + P+DSG+IYCLSR +C+ +AEKL++   +R++G   V V FYHA+  P+E+E  H++WSVG + V+CATVAFGMGI+KPDVRYVIH+SMPKSLTH+YQESGRAGRDG +A CV+F+ +KDK  LE+MI   + D+  P  S   ++D L+KCV +C NE  CRR + LE+FG+ FDRAKCN+TCDNC A    D  E++    A  ++ L  S +    +  T+ QLA L+RG   K + + +  + + G GAG  F + + D++      +R L E SVEN    F + YV  G
Sbjct:  624 PEKLSHSNQMQSILRRLHNKGLISRFIVDEAHCLSDWGHDFRPDYNQLGRLRRDYPGVPLMALTATASEKVVNDAVRALGMRNEYRYQS-SFNRPNLRYEVRKKDGKVTDAIADIVAQRPNDSGVIYCLSRKNCEQLAEKLQKK--LREKGCRNVLVSFYHADLDPKEREHRHKQWSVGRINVLCATVAFGMGIDKPDVRYVIHYSMPKSLTHYYQESGRAGRDGEDAECVLFYSYKDKQVLEKMIRNGSDDKCNP--SIRRKVDQLYKCVQYCENEFRCRRAMQLEFFGQKFDRAKCNQTCDNCKAGRLPD--ERNMTAEAITIINLFNSASNQSRKGITMLQLAELYRGSKSKAITKSYPINVIEGFGAGSKFKKHDIDKITHGMIFQRILVENSVENKGG-FTSDYVALG 1028          
BLAST of mRNA_P-wetherbeei_contig5554.1.1 vs. uniprot
Match: G4Z1V9_PHYSP (DNA helicase n=8 Tax=Phytophthora TaxID=4783 RepID=G4Z1V9_PHYSP)

HSP 1 Score: 350 bits (897), Expect = 2.850e-107
Identity = 192/412 (46.60%), Postives = 259/412 (62.86%), Query Frame = 1
Query:    1 PEKFANSPALRAKLKRLAEKRLLSRFVIDEAHCISQWGHDFRSDYLKLNLLRQEFPHVPIMALTATADRRIIKDAMSRLGFRNHNNLVSRS-FNRPNLSYDVLPKSRGIVDAIADTVLKYPDDSGIIYCLSRADCQTVAEKLREHEGVR--KRGVSVDFYHAERTPREKEEVHREWSVGNVKVICATVAFGMGINKPDVRYVIHHSMPKSLTHFYQESGRAGRDGMEARCVVFFCFKDKNRLERMITKDRTVPYASQNEQLDNLWKCVDFCFNEVECRRKLLLEYFGESFDRAKCNKTCDNCCAMT-DFDAEEKDCADAARAMLRLAESLTGLGARFTLNQLALLWRGQSVK--PLARFDSHQLTGAGAGRA-FSRAEADRVCQQACQKRFLEEFSVENGANQFLTTYVRPG 1215
            PEK A+S  L    + L ++ LL+RFVIDEAHCISQWGHDFR DY+ L  LR +FP VPIMALTATA+ +   D +  L  +N    ++RS FNRPNL+YDV  K+   +  IAD V K+ DDSGIIYCLS+ DC+  A+KL +  G    ++   + FYHA   P ++   H EWS G +K+ICATVAFGMGINKPDVRYVIHH++P+S+TH+YQE+GRAGRDG  A C++++ F D  R  ++ITKDR      +N  L NL +  +FC N+VECRR  LLEYFGE F   +C  TCDNC         E+ D  +   A+  + +SL   G   TL Q++ ++ GQ++K     +    QL G G G+  +SR+E +R+      +++  E    N A  F TT++ PG
Sbjct:  409 PEKIASSGMLNNLFESLEKRGLLARFVIDEAHCISQWGHDFRKDYMTLGSLRSKFPSVPIMALTATANTQTEADIVKNLKLKNP--FITRSSFNRPNLTYDVRKKTSKFMTEIADYVRKHIDDSGIIYCLSKKDCEQTADKLIKALGFEHTRKASQISFYHAGLEPEDRAYRHHEWSKGKIKLICATVAFGMGINKPDVRYVIHHTIPQSVTHYYQEAGRAGRDGEVANCILYYSFLDLTRRRKLITKDRD-NMQHRNVHLQNLRRMTEFCENQVECRRTSLLEYFGEHFSSDQCRGTCDNCKNKALGITFEKSDVTEDCVALAGMIKSLQESGDPATLVQISQIFLGQTIKGREWKQDQFAQLAGFGKGKGRYSRSEVERILYHMVLRQYTREVDQTN-AKGFTTTFLAPG 816          
BLAST of mRNA_P-wetherbeei_contig5554.1.1 vs. uniprot
Match: A0A1E7EUD2_9STRA (DNA helicase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUD2_9STRA)

HSP 1 Score: 351 bits (901), Expect = 3.710e-107
Identity = 190/412 (46.12%), Postives = 264/412 (64.08%), Query Frame = 1
Query:    1 PEKFANSPALRAKLKRLAEKRLLSRFVIDEAHCISQWGHDFRSDYLKLNLLRQEFPHVPIMALTATADRRIIKDAMSRLGFRNHNNLVSRSFNRPNLSYDVLPKSRG-IVDAIADTVLKYPDDSGIIYCLSRADCQTVAEKLREHEGVRKRG-VSVDFYHAERTPREKEEVHREWSVGNVKVICATVAFGMGINKPDVRYVIHHSMPKSLTHFYQESGRAGRDGMEARCVVFFCFKDKNRLERMITKDRTVPYA-SQNEQLDNLWKCVDFCFNEVECRRKLLLEYFGESFDRAKCNKTCDNCCAMTDFDAEEKDCADAARAMLRLAESLTGLGAR---FTLNQLALLWRGQSVKPLAR-FDSHQLTGAGAGRAFSRAEADRVCQQACQKRFLEEFSVENGANQFLTTYVRPG 1215
            PEK  +S  +++ L+RL  K L+SRFV+DEAHC+S WGHDFR DY +L +LR+++P VP+MALTATA+++++ DA+  LG                    +L K  G ++DAIAD +   P DSG+IYCLSR +C+ VAEKLR     +K G V V +YHAE  P+E+E  H++WS G + V+CATVAFGMGI+KPDVRYVIH+SMPKS+TH+YQESGRAGRDG  A C++F+ +KDK  LE+MI       Y+ S   ++D L+ C+++C ++  CRR + LE+FGE+FDRAKCNKTCDNC A     A+ +D    A +++ L  S +         T+ QL  L+RG   K + + + +  L G GAG  + + E +R+  +    R L E SVEN    F + YV  G
Sbjct:  592 PEKLRHSNQMQSILRRLYNKGLISRFVVDEAHCLSDWGHDFRPDYNQLGVLRKDYPGVPLMALTATANKKVVNDAIGALG--------------------MLRKKDGKVIDAIADLIASRPKDSGVIYCLSRKNCEQVAEKLRGKLREKKCGHVGVSYYHAELDPQERERRHKQWSSGRINVLCATVAFGMGIDKPDVRYVIHYSMPKSITHYYQESGRAGRDGDNADCILFYSYKDKQVLEKMIRSGNGGRYSPSIQRKIDQLYGCLNYCEDDFRCRRTMQLEFFGETFDRAKCNKTCDNCKAGRL--ADNRDMTKEAISIINLFNSASRKKRNTSGITMLQLTDLYRGSKSKAITKNYTTSGLEGYGAGSKYKKDEVERITHKMIFDRILIENSVENTGG-FTSDYVSLG 980          
BLAST of mRNA_P-wetherbeei_contig5554.1.1 vs. uniprot
Match: A0A7S4SBW1_9STRA (ATP-dependent DNA helicase n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SBW1_9STRA)

HSP 1 Score: 341 bits (874), Expect = 3.930e-107
Identity = 177/371 (47.71%), Postives = 247/371 (66.58%), Query Frame = 1
Query:    1 PEKFANSPALRAKLKRLAEKRLLSRFVIDEAHCISQWGHDFRSDYLKLNLLRQEFPHVPIMALTATADRRIIKDAMSRLGFRNHNNLVSRSFNRPNLSYDVLPKSRGIVDAIADTVLKYPDDSGIIYCLSRADCQTVAEKLREHEGVRKRGVS---VDFYHAERTPREKEEVHREWSVGNVKVICATVAFGMGINKPDVRYVIHHSMPKSLTHFYQESGRAGRDGMEARCVVFFCFKDKNRLERMITKD-RTVPYASQNEQLDNLWKCVDFCFNEVECRRKLLLEYFGESFDRAKCNKTCDNCCAMTDFDAEEKDCADAARAMLRLAESLTGL--GARFTLNQLALLWRGQSVKPLARFDS-HQLTGAGAG 1092
            PEK  +S  +++ + +L  + +LSRFV+DEAHC+S WGHDFR DY +L  LR ++P+VP+MALTATA+ ++++DA+  L  RN + L   SFNRPNL+Y+V  K    +D +AD + K  +DSG+IYCLSR DC+TV++KL+E   +R++G S   V FYHAE  P E++  H  W  G + V+CAT+AFGMGI+KPDVRYV+H+SMPKS+TH+YQESGRAGRDG +A C++F+ ++DK  LE MI K        S   ++D L+ C+ +C NE  CRR + LE+FGE FDR+ CNKTCDNC       A+  D  D A+ +++L         G   TL QL  L++G   K   +F    +L+G G G
Sbjct:  373 PEKLRHSGMIKSVMTKLYNRGMLSRFVVDEAHCLSDWGHDFRPDYNQLGCLRSDYPNVPMMALTATANEKVVQDAIRALKMRNEH-LYRSSFNRPNLAYEVRKKDSKSIDVMADYIAKRRNDSGVIYCLSRKDCETVSDKLQEK--LREKGCSNIGVSFYHAELDPSERQRRHHMWGSGRISVLCATIAFGMGIDKPDVRYVMHYSMPKSITHYYQESGRAGRDGDKADCILFYSYRDKKILEMMIRKTANNQNNQSTRRKIDQLYSCLRYCENEFLCRRTMQLEFFGEKFDRSLCNKTCDNC--RQGKIADRHDLTDVAKEIIKLFLDTQAEKNGRGVTLVQLTDLFKGSKNKNSTKFIILSKLSGYGKG 738          
BLAST of mRNA_P-wetherbeei_contig5554.1.1 vs. uniprot
Match: A0A0P1A6Z6_PLAHL (DNA helicase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6Z6_PLAHL)

HSP 1 Score: 351 bits (900), Expect = 6.620e-107
Identity = 196/413 (47.46%), Postives = 262/413 (63.44%), Query Frame = 1
Query:    1 PEKFANSPALRAKLKRLAEKRLLSRFVIDEAHCISQWGHDFRSDYLKLNLLRQEFPHVPIMALTATADRRIIKDAMSRLGFRNHNNLVSRS-FNRPNLSYDVLPKSRGIVDAIADTVLKYPDDSGIIYCLSRADCQTVAEKLREHEGVR--KRGVSVDFYHAERTPREKEEVHREWSVGNVKVICATVAFGMGINKPDVRYVIHHSMPKSLTHFYQESGRAGRDGMEARCVVFFCFKDKNRLERMITKDRTVPYASQNEQLDNLWKCVDFCFNEVECRRKLLLEYFGESFDRAKCNKTCDNCCAMT-DFDAEEKDCADAARAMLRLAESLTGLGARFTLNQLALLWRGQSVK--PLARFDSHQLTGAGAGRA-FSRAEADRVCQQACQKRFLEEFSVENGANQFLTTYVRPGR 1218
            PEK A+S  L    + L ++ LL+RFVIDEAHCISQWGHDFR DYL L  LR +F  VPIMALTATA+ +   D +  L  RN    V+RS FNRPNL+YDV  K+   ++ IAD V K+ DDSGIIYCLS+ DC+  AEKL +  G    ++   + FYHA   P ++   H EWS G++K+ICATVAFGMGINKPDVRYVIHH++P+S+TH+YQE+GRAGRDG  A C++++ F D  R  ++ITKDR      +N  L NL +   FC N+VECRR  LLEYFGE F   +C+ TCDNC         E+ D  D   A++++ ++L       TL Q+A ++ G  VK     ++   QL G G G+  +SR+EA+R+      +++L E    N    F TT++ PG+
Sbjct:  535 PEKIASSNMLNNLFESLEKRGLLARFVIDEAHCISQWGHDFRKDYLNLGTLRAKFSSVPIMALTATANTQTEADIVKNLKLRNP--FVTRSSFNRPNLTYDVRRKTSKFMNEIADYVRKHIDDSGIIYCLSKKDCEQTAEKLIKALGFEQTRKANQISFYHAGLEPEDRAYRHHEWSKGSIKLICATVAFGMGINKPDVRYVIHHTIPQSVTHYYQEAGRAGRDGEVANCILYYSFMDLTRRRKLITKDRD-NIQHRNVHLQNLRRMTQFCENQVECRRTSLLEYFGEHFLDEQCHGTCDNCKNKALGITFEKTDVTDDCLALVKMVKTLEESNDPTTLVQIAHIYLGMVVKGREWKQYQMAQLEGFGKGKGRYSRSEAERILYHMILRQYLCEKDQTN-VKGFTTTFLSPGQ 943          
BLAST of mRNA_P-wetherbeei_contig5554.1.1 vs. uniprot
Match: A0A833WZH4_PHYIN (DNA helicase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WZH4_PHYIN)

HSP 1 Score: 350 bits (898), Expect = 1.250e-106
Identity = 195/412 (47.33%), Postives = 259/412 (62.86%), Query Frame = 1
Query:    1 PEKFANSPALRAKLKRLAEKRLLSRFVIDEAHCISQWGHDFRSDYLKLNLLRQEFPHVPIMALTATADRRIIKDAMSRLGFRNHNNLVSRS-FNRPNLSYDVLPKSRGIVDAIADTVLKYPDDSGIIYCLSRADCQTVAEKLREHEGVR--KRGVSVDFYHAERTPREKEEVHREWSVGNVKVICATVAFGMGINKPDVRYVIHHSMPKSLTHFYQESGRAGRDGMEARCVVFFCFKDKNRLERMITKDRTVPYASQNEQLDNLWKCVDFCFNEVECRRKLLLEYFGESFDRAKCNKTCDNCC-AMTDFDAEEKDCADAARAMLRLAESLTGLGARFTLNQLALLWRGQSVK--PLARFDSHQLTGAGAGRA-FSRAEADRVCQQACQKRFLEEFSVENGANQFLTTYVRPG 1215
            PEK A+S  L    + L ++ LL+RFVIDEAHCISQWGHDFR DYL L  LR +FP VPIMALTATA+ +   D +  L  RN    ++RS FNRPNL+YDV  K+   +  IAD V K+ DDSGIIYCLS+ DC+  AEKL +  G    ++   + FYHA     ++   H EWS G +K+ICATVAFGMGINKPDVRYVIHH++P+S+TH+YQE+GRAGRDG  A C++++ F D  R  ++ITKDR      +N  L NL +  +FC N+VECRR  LLEYFGE F   +C+ TCDNC   +     E+ D  +   A+  + ++L G G   TL Q+A ++ G  VK     +    QL G G G+  +SR+E +R+      +++L E    N A  F TT++  G
Sbjct:  537 PEKIASSGMLSNLFESLEKRGLLARFVIDEAHCISQWGHDFRKDYLNLGTLRTKFPSVPIMALTATANSQTEADIVKNLKLRNP--FITRSSFNRPNLTYDVRKKTSKFMSEIADFVRKHIDDSGIIYCLSKKDCEQTAEKLIKALGFEHTRKASQISFYHAGLEAGDRAYRHHEWSKGKIKLICATVAFGMGINKPDVRYVIHHTIPQSVTHYYQEAGRAGRDGEVANCILYYSFLDLTRRRKLITKDRD-NMQHRNVHLQNLRRMTEFCENQVECRRTSLLEYFGEHFSSEQCHGTCDNCKNKVLGISFEKSDVTEDCVALAEMIKTLQGSGDPTTLVQIAQVFLGMVVKGREWKQNQFEQLGGFGKGKGRYSRSEVERILYHMILRQYLREVDQTN-AKGFTTTFLSLG 944          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5554.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR28_ECTSI9.020e-14353.98DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A836CQM3_9STRA3.910e-13252.72DNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
B8BWN4_THAPS1.740e-12448.06ATP-dependent DNA helicase (Fragment) n=1 Tax=Thal... [more]
B7FSW6_PHATC8.490e-11946.94ATP-dependent DNA helicase (Fragment) n=1 Tax=Phae... [more]
A0A7S4EMT8_9STRA1.150e-11849.39DNA helicase n=1 Tax=Pseudo-nitzschia australis Ta... [more]
G4Z1V9_PHYSP2.850e-10746.60DNA helicase n=8 Tax=Phytophthora TaxID=4783 RepID... [more]
A0A1E7EUD2_9STRA3.710e-10746.12DNA helicase n=1 Tax=Fragilariopsis cylindrus CCMP... [more]
A0A7S4SBW1_9STRA3.930e-10747.71ATP-dependent DNA helicase n=3 Tax=Ditylum brightw... [more]
A0A0P1A6Z6_PLAHL6.620e-10747.46DNA helicase n=1 Tax=Plasmopara halstedii TaxID=47... [more]
A0A833WZH4_PHYIN1.250e-10647.33DNA helicase n=1 Tax=Phytophthora infestans TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5554contigP-wetherbeei_contig5554:269..2789 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FR28
PFAMsDEAD,HRDC,Helicase_C,RQC,RecQ_Zn_bind
Model size1218
Max annot lvl2759|Eukaryota
KEGG koko:K03654,ko:K10901
KEGG Pathwayko03018,ko03440,ko03460,map03018,map03440,map03460
KEGG ModuleM00295,M00414
Hectar predicted targeting categoryother localisation
Exons6
Evalue1.48e-143
EggNOG OGsCOG0514@1|root,KOG0351@2759|Eukaryota
EC3.6.4.12
Descriptionfour-way junction helicase activity
Cds size1218
COG categoryL
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5554.1.1prot_P-wetherbeei_contig5554.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5554 269..2789 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186827.1081138-CDS-P-wetherbeei_contig5554:268..3811683186827.1081138-CDS-P-wetherbeei_contig5554:268..381Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5554 269..381 +
1683186827.123578-CDS-P-wetherbeei_contig5554:663..7211683186827.123578-CDS-P-wetherbeei_contig5554:663..721Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5554 664..721 +
1683186827.1324544-CDS-P-wetherbeei_contig5554:910..13071683186827.1324544-CDS-P-wetherbeei_contig5554:910..1307Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5554 911..1307 +
1683186827.1415973-CDS-P-wetherbeei_contig5554:1532..17771683186827.1415973-CDS-P-wetherbeei_contig5554:1532..1777Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5554 1533..1777 +
1683186827.151624-CDS-P-wetherbeei_contig5554:2168..23221683186827.151624-CDS-P-wetherbeei_contig5554:2168..2322Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5554 2169..2322 +
1683186827.1616824-CDS-P-wetherbeei_contig5554:2538..27891683186827.1616824-CDS-P-wetherbeei_contig5554:2538..2789Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5554 2539..2789 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5554.1.1

>prot_P-wetherbeei_contig5554.1.1 ID=prot_P-wetherbeei_contig5554.1.1|Name=mRNA_P-wetherbeei_contig5554.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=406bp
PEKFANSPALRAKLKRLAEKRLLSRFVIDEAHCISQWGHDFRSDYLKLNL
LRQEFPHVPIMALTATADRRIIKDAMSRLGFRNHNNLVSRSFNRPNLSYD
VLPKSRGIVDAIADTVLKYPDDSGIIYCLSRADCQTVAEKLREHEGVRKR
GVSVDFYHAERTPREKEEVHREWSVGNVKVICATVAFGMGINKPDVRYVI
HHSMPKSLTHFYQESGRAGRDGMEARCVVFFCFKDKNRLERMITKDRTVP
YASQNEQLDNLWKCVDFCFNEVECRRKLLLEYFGESFDRAKCNKTCDNCC
AMTDFDAEEKDCADAARAMLRLAESLTGLGARFTLNQLALLWRGQSVKPL
ARFDSHQLTGAGAGRAFSRAEADRVCQQACQKRFLEEFSVENGANQFLTT
YVRPGR
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mRNA from alignment at P-wetherbeei_contig5554:269..2789+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5554.1.1 ID=mRNA_P-wetherbeei_contig5554.1.1|Name=mRNA_P-wetherbeei_contig5554.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2521bp|location=Sequence derived from alignment at P-wetherbeei_contig5554:269..2789+ (Phaeothamnion wetherbeei SAG_119_79)
CCGGAAAAGTTCGCCAACAGCCCGGCGCTGCGGGCGAAACTGAAGCGGCT GGCGGAGAAGCGGCTGCTCTCGCGGTTCGTCATCGACGAGGCGCACTGCA TCAGCCAGTGGGGGTGAGCGGGGCTGTTATGTGCTTGTTTTCATCTTTGT AGACGTAGGTATAGGGTTGTTCTGTCTTGCTGCTGACACTATGAAACGGG GAGCGCGTGCCGTTGGTCGCTGAGAGGCGGTGATTTAAGAAATATTGGCG TGCGGCCGCCTCAGTTGCCCCTCACCGCCTTCGCCGCCGCTAACGCTCAC TGCCTCCGCCGCCGCTGCTTGCGCGGCCACTGCTGCTGGTGATGCTGTCG CTGTCGTCGCTCCTTTCCCCGCCTGTTCTCTGTGCTACACACCAGGCACG ACTTCCGGTCCGACTACCTCAAGCTCAACCTCCTGCGACAAGAGTTCCCG CACGTGAGTGACACGGCAACGGGAGAGAAGGGGGCGCGGACGAATGAGGC GTGTTTGGAGTGAGAAGGTGCTTGGCAAGCAACAGTTCGATATCTTGTTT AGTCCTAGTCCATGTTCCTACACCCTTATGCCACCACCGCGTTGCCGCCG CTGCCGCCGCAATCCCGCCCTGTCATCCATCCCTTGTCGCAGGTGCCCAT CATGGCGCTGACTGCGACGGCGGACCGCCGCATCATTAAGGACGCCATGA GCCGCCTCGGCTTCCGCAACCACAACAACCTCGTCTCGCGCAGCTTCAAC CGCCCGAACCTGTCCTATGATGTCCTGCCCAAGTCCCGTGGCATCGTCGA TGCGATAGCCGACACCGTGCTCAAGTACCCCGACGACTCGGGCATCATCT ACTGTCTGAGCCGCGCAGACTGCCAGACGGTGGCGGAGAAGCTGCGGGAG CACGAGGGGGTGCGGAAGCGCGGCGTGTCGGTGGACTTTTACCATGCGGA GCGTACGCCGCGCGAGAAGGAGGAGGTGCACCGCGAATGGAGCGTCGGCA ACGTCAAGGTCATCTGCGCCACCGTCGCCTTCGGCATGGGTGAGTGCGGT CTGTTCTGGGTGGTTTTCTGCATTTCTGTTTCTGTTGCTGTCGTTTTGGA GGCTTTCCAGCTGGCGCGGCGGAAACTTCAGGATAGGTTACCACGGGAGC ATTGTCGTACTGTGGTCAAGGTTGGTCTGCCGCTGCTTCGCCGCAGTCGC TGCAGTTTCCACCGCCATGCCACGTTCTGCTCGGCTTGACCACATTTCCT TGTTTTGCTGTCAGGCATCAACAAGCCGGACGTGCGGTACGTGATCCACC ACTCGATGCCCAAGTCGCTGACGCACTTCTACCAAGAGTCGGGGCGGGCG GGGCGGGATGGCATGGAGGCGCGGTGCGTGGTCTTCTTCTGCTTCAAGGA CAAGAACCGGCTGGAGCGCATGATCACCAAGGACCGCACCGTGCCGTATG CCAGCCAGAACGAGCAGCTCGATAACCTCTGGAAGTGTGTGGACTTCTGT TTCAACGAGGTGCGTCGACGGATGGATTAAATATAGTTGTTGCTGTCGTT GCTATCGATTGGATGCTTGCGGTTGGATGATTGCAGGTGCAATGTTGTCG CAATTGGTGGGATGCATACGAAGGATGGTTTCCGAACAAGAGGCGAGCGG CGTGAACGACGGCAGCAGCAGCGACGCGTGCCCGGCGCAACGGCGGTGGC AGCGGCGGCAGACATGGCGGACACTTGCCGGCACAAGTGCTGCCGCAGAG ATTCTGGATACTGACAATGCCGAGCTTTGGCAGCGATGCACCGACTCTGT CCGGCCATTAACTTAATTGCCGCCTTTGGCACTAGTTGGCCAACCATCTC CATTTCTTTTGTGGGTAGATCTTTCTCCTTCTCCATATTGCCGCTGGCAG GTGGAGTGCCGGCGAAAGTTGCTGCTTGAGTACTTCGGGGAGAGCTTCGA CCGCGCGAAGTGCAACAAGACGTGCGACAACTGCTGCGCCATGACCGACT TCGATGCCGAGGAGAAGGACTGCGCGGACGCTGCCCGCGCGATGCTGCGC CTCGGTGAGCGCAGTAGCGCGTTGGGGTGTAGGAGAAGGGTATCGACGAT GCGGTGCTGGCGGCGGCAGCGACAGCGACAGCAACCGTGCGGCAGTGCTG GTGGCGTGATGGTACTGAAGCATCCACCACTTTAGCCTTGAATCCCCTTG ATAATCTGTTACCCCGGTCCTCTTATCTCCGTTTCTTTTCCTCGTTCTTG CCTCTGTTCTCTGTTTCCAGCCGAGTCGCTGACGGGGCTCGGCGCGCGCT TCACACTCAACCAGCTCGCCTTGCTCTGGCGGGGGCAGTCCGTCAAGCCG CTGGCGCGCTTCGACTCGCACCAGCTGACCGGCGCCGGGGCCGGCCGGGC CTTCAGCCGCGCCGAGGCCGACCGCGTCTGCCAGCAGGCGTGCCAGAAGC GCTTCCTCGAGGAATTTTCCGTGGAGAACGGCGCCAACCAGTTCCTGACG ACGTACGTGCGTCCCGGGCGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5554:269..2789+

>mRNA_P-wetherbeei_contig5554.1.1 ID=mRNA_P-wetherbeei_contig5554.1.1|Name=mRNA_P-wetherbeei_contig5554.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1218bp|location=Sequence derived from alignment at P-wetherbeei_contig5554:269..2789+ (Phaeothamnion wetherbeei SAG_119_79)
CCGGAAAAGTTCGCCAACAGCCCGGCGCTGCGGGCGAAACTGAAGCGGCT
GGCGGAGAAGCGGCTGCTCTCGCGGTTCGTCATCGACGAGGCGCACTGCA
TCAGCCAGTGGGGGCACGACTTCCGGTCCGACTACCTCAAGCTCAACCTC
CTGCGACAAGAGTTCCCGCACGTGCCCATCATGGCGCTGACTGCGACGGC
GGACCGCCGCATCATTAAGGACGCCATGAGCCGCCTCGGCTTCCGCAACC
ACAACAACCTCGTCTCGCGCAGCTTCAACCGCCCGAACCTGTCCTATGAT
GTCCTGCCCAAGTCCCGTGGCATCGTCGATGCGATAGCCGACACCGTGCT
CAAGTACCCCGACGACTCGGGCATCATCTACTGTCTGAGCCGCGCAGACT
GCCAGACGGTGGCGGAGAAGCTGCGGGAGCACGAGGGGGTGCGGAAGCGC
GGCGTGTCGGTGGACTTTTACCATGCGGAGCGTACGCCGCGCGAGAAGGA
GGAGGTGCACCGCGAATGGAGCGTCGGCAACGTCAAGGTCATCTGCGCCA
CCGTCGCCTTCGGCATGGGCATCAACAAGCCGGACGTGCGGTACGTGATC
CACCACTCGATGCCCAAGTCGCTGACGCACTTCTACCAAGAGTCGGGGCG
GGCGGGGCGGGATGGCATGGAGGCGCGGTGCGTGGTCTTCTTCTGCTTCA
AGGACAAGAACCGGCTGGAGCGCATGATCACCAAGGACCGCACCGTGCCG
TATGCCAGCCAGAACGAGCAGCTCGATAACCTCTGGAAGTGTGTGGACTT
CTGTTTCAACGAGGTGGAGTGCCGGCGAAAGTTGCTGCTTGAGTACTTCG
GGGAGAGCTTCGACCGCGCGAAGTGCAACAAGACGTGCGACAACTGCTGC
GCCATGACCGACTTCGATGCCGAGGAGAAGGACTGCGCGGACGCTGCCCG
CGCGATGCTGCGCCTCGCCGAGTCGCTGACGGGGCTCGGCGCGCGCTTCA
CACTCAACCAGCTCGCCTTGCTCTGGCGGGGGCAGTCCGTCAAGCCGCTG
GCGCGCTTCGACTCGCACCAGCTGACCGGCGCCGGGGCCGGCCGGGCCTT
CAGCCGCGCCGAGGCCGACCGCGTCTGCCAGCAGGCGTGCCAGAAGCGCT
TCCTCGAGGAATTTTCCGTGGAGAACGGCGCCAACCAGTTCCTGACGACG
TACGTGCGTCCCGGGCGC
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