mRNA_P-wetherbeei_contig12485.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12485.1.1 vs. uniprot
Match: A0A7S2BWG3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BWG3_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 3.760e-10 Identity = 30/68 (44.12%), Postives = 43/68 (63.24%), Query Frame = 1 Query: 16 TLRATIADGRVVVGTLECVDALGNLVMGDALETTPKDPSSSGVGVARQRQMGLVMVPGKHLIKAEVRE 219 TL+ T+ DGR VVGT +C+D N ++ + E T + +GV +R +GLVMVPGKHL+ E+ E Sbjct: 10 TLKVTLTDGRFVVGTFQCLDKKKNFILYNC-EETRRVSDENGVEGDAKRSLGLVMVPGKHLVSVELEE 76
BLAST of mRNA_P-wetherbeei_contig12485.1.1 vs. uniprot
Match: A0A813CYM0_9DINO (NAA38 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CYM0_9DINO) HSP 1 Score: 60.1 bits (144), Expect = 7.350e-10 Identity = 30/66 (45.45%), Postives = 46/66 (69.70%), Query Frame = 1 Query: 19 LRATIADGRVVVGTLECVDALGNLVMGDA-LETTPKDPSSSGVGVARQRQMGLVMVPGKHLIKAEV 213 ++ T++DGRV++GTL+CVD LGN+V+G A L +P ++ RQ+ MG VMVPG ++ K +V Sbjct: 46 VQVTVSDGRVIMGTLKCVDGLGNIVLGQAELARSPDAIAAESPQQRRQQWMGSVMVPGANVQKVQV 111
BLAST of mRNA_P-wetherbeei_contig12485.1.1 vs. uniprot
Match: A0A0T6B2R1_9SCAR (Sm domain-containing protein n=1 Tax=Oryctes borbonicus TaxID=1629725 RepID=A0A0T6B2R1_9SCAR) HSP 1 Score: 57.0 bits (136), Expect = 1.080e-8 Identity = 28/74 (37.84%), Postives = 44/74 (59.46%), Query Frame = 1 Query: 10 HRTLRATIADGRVVVGTLECVDALGNLVMGDALETTPKDPSSSGV---GVARQRQMGLVMVPGKHLIKAEVRED 222 ++ LR T+ DGRV++G C D N+++G E P++ + GV V R +GLVMVPGKH++ V ++ Sbjct: 13 NQLLRITMTDGRVLIGMFFCTDRDANIILGACSEYLPEEVDAEGVVMKEVEEPRILGLVMVPGKHIVNISVDQN 86
BLAST of mRNA_P-wetherbeei_contig12485.1.1 vs. uniprot
Match: A0A7J7BD55_9COLE (Sm domain-containing protein n=1 Tax=Lamprigera yunnana TaxID=370605 RepID=A0A7J7BD55_9COLE) HSP 1 Score: 57.0 bits (136), Expect = 2.030e-8 Identity = 29/76 (38.16%), Postives = 45/76 (59.21%), Query Frame = 1 Query: 10 HRTLRATIADGRVVVGTLECVDALGNLVMGDALETTPKD-----PSSSGVGVARQRQMGLVMVPGKHLIKAEVRED 222 ++TL+ ++DGRV++G C D N+++G E P D PS+S V R +GLVMVPGKH++ + E+ Sbjct: 46 NKTLKIEMSDGRVLIGVFLCTDRDANIILGSCSEYLPDDLNLEQPSTSN-SVEEPRMLGLVMVPGKHIVSICIDEN 120
BLAST of mRNA_P-wetherbeei_contig12485.1.1 vs. uniprot
Match: UPI000C20132C (N-alpha-acetyltransferase 38, NatC auxiliary subunit n=1 Tax=Onthophagus taurus TaxID=166361 RepID=UPI000C20132C) HSP 1 Score: 57.0 bits (136), Expect = 3.440e-8 Identity = 31/77 (40.26%), Postives = 47/77 (61.04%), Query Frame = 1 Query: 10 HRTLRATIADGRVVVGTLECVDALGNLVMGDALETTPKDPSSSGV---GVARQRQMGLVMVPGKHL--IKAEVREDY 225 ++ LR T++DGRV+VG L C D N+++G E P++ +G V R +GLVMVPGKH+ I +V E++ Sbjct: 78 NQLLRITMSDGRVLVGMLFCTDRDANIILGACSEFLPEETDENGQVIKDVEEPRILGLVMVPGKHILNISVDVNENH 154
BLAST of mRNA_P-wetherbeei_contig12485.1.1 vs. uniprot
Match: A0A7S4DBE9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBE9_HETAK) HSP 1 Score: 55.8 bits (133), Expect = 4.170e-8 Identity = 27/73 (36.99%), Postives = 45/73 (61.64%), Query Frame = 1 Query: 19 LRATIADGRVVVGTLECVDALGNLVMGDALETT-PKDPSSSGVGVARQ--------RQMGLVMVPGKHLIKAE 210 ++ T++DGR VVGT +C+D L N+++ +A+ET P + + RQ+G+VMVPG+HL++ E Sbjct: 31 IKTTLSDGRTVVGTFDCLDRLKNIILSNAVETRYPSNRNQQXXXXXXXXXXXPPSVRQLGMVMVPGRHLVRVE 103
BLAST of mRNA_P-wetherbeei_contig12485.1.1 vs. uniprot
Match: A0A8K0D486_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0D486_9COLE) HSP 1 Score: 55.5 bits (132), Expect = 8.290e-8 Identity = 26/74 (35.14%), Postives = 43/74 (58.11%), Query Frame = 1 Query: 10 HRTLRATIADGRVVVGTLECVDALGNLVMGDALETTPKDPS---SSGVGVARQRQMGLVMVPGKHLIKAEVRED 222 ++ R ++DGRV++GT C D N+++G E P++ S S+ R +GLVMVPGKH++ + E+ Sbjct: 48 NKIFRVEMSDGRVLIGTFLCTDRDTNIILGSCSEYLPEEASACSSTSTTNEEPRMLGLVMVPGKHIVSISIDEN 121
BLAST of mRNA_P-wetherbeei_contig12485.1.1 vs. uniprot
Match: A0A4D9CXW4_9STRA (Sm domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXW4_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 1.670e-7 Identity = 28/70 (40.00%), Postives = 45/70 (64.29%), Query Frame = 1 Query: 19 LRATIADGRVVVGTLECVDALGNLVMGDALETTPKDPSSSGVGVARQ----RQMGLVMVPGKHLIKAEVR 216 LR T++DGR V G +C+D N+++ +A E + +GVG + RQ+GLVM+PGKH+++ EV+ Sbjct: 65 LRVTLSDGRAVTGRYQCMDEHLNVILREASERRGMG-ARAGVGAGSESVQVRQLGLVMLPGKHVVRVEVK 133
BLAST of mRNA_P-wetherbeei_contig12485.1.1 vs. uniprot
Match: A0A7J7AKT4_9COLE (Sm domain-containing protein n=1 Tax=Abscondita terminalis TaxID=2069292 RepID=A0A7J7AKT4_9COLE) HSP 1 Score: 55.1 bits (131), Expect = 1.700e-7 Identity = 26/76 (34.21%), Postives = 43/76 (56.58%), Query Frame = 1 Query: 10 HRTLRATIADGRVVVGTLECVDALGNLVMGDALETTPKDPSSS-----GVGVARQRQMGLVMVPGKHLIKAEVRED 222 ++TL+ ++DGRV++G C D N+++G E P+D S V R +GLVMVPGKH++ + ++ Sbjct: 48 NKTLKIEMSDGRVLIGIFLCTDRDANIILGSCSEYLPEDMKSEEATNLDVTSEEPRMLGLVMVPGKHIVSIHIDQN 123
BLAST of mRNA_P-wetherbeei_contig12485.1.1 vs. uniprot
Match: W7TM11_9STRA (Ribonucleoprotein LSM n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TM11_9STRA) HSP 1 Score: 52.8 bits (125), Expect = 4.840e-7 Identity = 26/69 (37.68%), Postives = 43/69 (62.32%), Query Frame = 1 Query: 19 LRATIADGRVVVGTLECVDALGNLVMGDALETT---PKDPSSSGVGVARQRQMGLVMVPGKHLIKAEVR 216 LR T++DGR V G +C+D N+++ +A E + +GV + R +GLVM+PGKH+++ EV+ Sbjct: 31 LRVTLSDGRAVTGRYQCMDEHLNVILREASERRGIGARAGVGAGVESVQVRHLGLVMLPGKHVVRVEVK 99 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12485.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12485.1.1 >prot_P-wetherbeei_contig12485.1.1 ID=prot_P-wetherbeei_contig12485.1.1|Name=mRNA_P-wetherbeei_contig12485.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=78bp HHSHRTLRATIADGRVVVGTLECVDALGNLVMGDALETTPKDPSSSGVGVback to top mRNA from alignment at P-wetherbeei_contig12485:624..857+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12485.1.1 ID=mRNA_P-wetherbeei_contig12485.1.1|Name=mRNA_P-wetherbeei_contig12485.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=234bp|location=Sequence derived from alignment at P-wetherbeei_contig12485:624..857+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12485:624..857+ >mRNA_P-wetherbeei_contig12485.1.1 ID=mRNA_P-wetherbeei_contig12485.1.1|Name=mRNA_P-wetherbeei_contig12485.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=234bp|location=Sequence derived from alignment at P-wetherbeei_contig12485:624..857+ (Phaeothamnion wetherbeei SAG_119_79)back to top |