mRNA_P-wetherbeei_contig55421.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig55421.1.1
Unique NamemRNA_P-wetherbeei_contig55421.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig55421.1.1 vs. uniprot
Match: UPI001993CA67 (Alpha/beta hydrolase n=1 Tax=Polaromonas sp. TaxID=1869339 RepID=UPI001993CA67)

HSP 1 Score: 307 bits (787), Expect = 1.880e-103
Identity = 150/174 (86.21%), Postives = 161/174 (92.53%), Query Frame = 1
Query:    1 VLNATVSTDTYRLTQGLAYGDLARQQLDVYQPSADVGKAPLVVFFYGGSWSSGERADYRFVGEALASRGIVTLVADYRLSPEFRYPAFLQDSARAVRWALEHAIAYGADPARVFVMGHSAGAYNAAMVALDARWLAAEGLRPSRLAGWIGLAGPYDFLPIGDRQTRVAFNWPAT 522
            +LNATVSTD+YRLTQGLAYG L RQ LDVYQP  +V K P+VVFFYGGSWSSGERA+YRFVGEALASRGIV ++ADYRLSP FRYPAFLQDSA+AVRWAL HA  YGADPARVFVMGHSAGAYNAAMVALD RWLAAEGL+P+RLAGWIGLAGPYDFLPIGDRQTRVAF+WPAT
Sbjct:   29 LLNATVSTDSYRLTQGLAYGRLERQLLDVYQPRNEVAKPPMVVFFYGGSWSSGERANYRFVGEALASRGIVAVLADYRLSPAFRYPAFLQDSAQAVRWALAHAAEYGADPARVFVMGHSAGAYNAAMVALDPRWLAAEGLQPARLAGWIGLAGPYDFLPIGDRQTRVAFDWPAT 202          
BLAST of mRNA_P-wetherbeei_contig55421.1.1 vs. uniprot
Match: A0A7Y0GHV2_9BURK (Alpha/beta hydrolase n=1 Tax=Polaromonas sp. TaxID=1869339 RepID=A0A7Y0GHV2_9BURK)

HSP 1 Score: 295 bits (754), Expect = 1.770e-98
Identity = 142/174 (81.61%), Postives = 156/174 (89.66%), Query Frame = 1
Query:    1 VLNATVSTDTYRLTQGLAYGDLARQQLDVYQPSADVGKAPLVVFFYGGSWSSGERADYRFVGEALASRGIVTLVADYRLSPEFRYPAFLQDSARAVRWALEHAIAYGADPARVFVMGHSAGAYNAAMVALDARWLAAEGLRPSRLAGWIGLAGPYDFLPIGDRQTRVAFNWPAT 522
            +LNATVSTDTYR T+G++YG   RQ+LDVYQP + V +APLVVFFYGGSWSSG+R DYRFVGEALAS GIVTLVADYRLSPEFRYPAF+QDSA+AV WAL HA  YGADPARVFVMGHSAGAYNAAMVALD RWL A+G+ PS+LAGWIGLAGPYDFLPIGD QT+VAFNWP T
Sbjct:   29 LLNATVSTDTYRRTEGVSYGAHPRQRLDVYQPESPVRQAPLVVFFYGGSWSSGDRGDYRFVGEALASEGIVTLVADYRLSPEFRYPAFVQDSAQAVHWALAHAADYGADPARVFVMGHSAGAYNAAMVALDGRWLEAQGMTPSQLAGWIGLAGPYDFLPIGDAQTQVAFNWPGT 202          
BLAST of mRNA_P-wetherbeei_contig55421.1.1 vs. uniprot
Match: UPI001C3E9A71 (alpha/beta hydrolase n=2 Tax=unclassified Polaromonas TaxID=2638319 RepID=UPI001C3E9A71)

HSP 1 Score: 293 bits (749), Expect = 8.910e-98
Identity = 141/174 (81.03%), Postives = 155/174 (89.08%), Query Frame = 1
Query:    1 VLNATVSTDTYRLTQGLAYGDLARQQLDVYQPSADVGKAPLVVFFYGGSWSSGERADYRFVGEALASRGIVTLVADYRLSPEFRYPAFLQDSARAVRWALEHAIAYGADPARVFVMGHSAGAYNAAMVALDARWLAAEGLRPSRLAGWIGLAGPYDFLPIGDRQTRVAFNWPAT 522
            +LNATVSTDTYR TQGL YGD  RQ+LDVYQP    G+AP+VVFFYGGSWSSGERADYRFVGEALA+ GIV ++ADYRLSP F YPAF+QDSARAV WA+ H  A+GADP R+FVMGHSAGAYNAAMVALD RWLAAEGL+PSRLAGWIGLAGPYDFLPIGDRQT+VAF+WP T
Sbjct:   22 LLNATVSTDTYRRTQGLPYGDHPRQRLDVYQPVDGTGQAPMVVFFYGGSWSSGERADYRFVGEALAASGIVAVIADYRLSPAFPYPAFVQDSARAVGWAVAHGAAHGADPDRIFVMGHSAGAYNAAMVALDPRWLAAEGLKPSRLAGWIGLAGPYDFLPIGDRQTQVAFDWPRT 195          
BLAST of mRNA_P-wetherbeei_contig55421.1.1 vs. uniprot
Match: UPI0019B5B53C (Alpha/beta hydrolase n=1 Tax=Polaromonas sp. TaxID=1869339 RepID=UPI0019B5B53C)

HSP 1 Score: 291 bits (744), Expect = 5.850e-97
Identity = 140/174 (80.46%), Postives = 154/174 (88.51%), Query Frame = 1
Query:    1 VLNATVSTDTYRLTQGLAYGDLARQQLDVYQPSADVGKAPLVVFFYGGSWSSGERADYRFVGEALASRGIVTLVADYRLSPEFRYPAFLQDSARAVRWALEHAIAYGADPARVFVMGHSAGAYNAAMVALDARWLAAEGLRPSRLAGWIGLAGPYDFLPIGDRQTRVAFNWPAT 522
            VLNATV TDTY  T+G+AYG  ARQ++D+Y+P   +  APLV+FFYGGSWSSGERADYRFVGEALAS+GIVTLVADYRLSP FRYPAF+ DSA+AVRWA EHA  YGADPARVFVMGHSAGAYNAAM+ALD RWL AEGL PSRLAGWIGLAGPYDFLPIGD+ T+VAFNWP T
Sbjct:   29 VLNATVPTDTYLRTEGVAYGPDARQRMDIYRPREPLRNAPLVIFFYGGSWSSGERADYRFVGEALASQGIVTLVADYRLSPAFRYPAFVNDSAKAVRWAFEHAQEYGADPARVFVMGHSAGAYNAAMIALDKRWLQAEGLAPSRLAGWIGLAGPYDFLPIGDKLTQVAFNWPET 202          
BLAST of mRNA_P-wetherbeei_contig55421.1.1 vs. uniprot
Match: A0A8C8FXV0_ONCTS (Abhydrolase_3 domain-containing protein n=1 Tax=Oncorhynchus tshawytscha TaxID=74940 RepID=A0A8C8FXV0_ONCTS)

HSP 1 Score: 288 bits (737), Expect = 4.560e-96
Identity = 143/175 (81.71%), Postives = 153/175 (87.43%), Query Frame = 1
Query:    1 VLNATVSTDTYRLTQGLAYGDLARQQLDVYQPSA-DVGKAPLVVFFYGGSWSSGERADYRFVGEALASRGIVTLVADYRLSPEFRYPAFLQDSARAVRWALEHAIAYGADPARVFVMGHSAGAYNAAMVALDARWLAAEGLRPSRLAGWIGLAGPYDFLPIGDRQTRVAFNWPAT 522
            +LNATV TDTYRLTQ LAYG   RQ+LDVYQP+A    K PLVVFFYGGSWSSGER DYRF+GEALAS GIVT+VADYRLSP FRYP F+QDSA AVRWAL+ A  YGADPARVFVMGHSAGAYNAAMVALD RWL AEGL P+RLAGWIGLAGPYDFLPIGDRQT+VAF+WP T
Sbjct:   29 LLNATVPTDTYRLTQDLAYGPHPRQRLDVYQPTAAGPDKPPLVVFFYGGSWSSGERGDYRFIGEALASEGIVTVVADYRLSPAFRYPTFVQDSAAAVRWALQQAADYGADPARVFVMGHSAGAYNAAMVALDPRWLRAEGLAPARLAGWIGLAGPYDFLPIGDRQTQVAFSWPGT 203          
BLAST of mRNA_P-wetherbeei_contig55421.1.1 vs. uniprot
Match: A0A1S8FNP2_9BURK (Esterase n=1 Tax=Polaromonas sp. A23 TaxID=1944133 RepID=A0A1S8FNP2_9BURK)

HSP 1 Score: 288 bits (736), Expect = 1.060e-95
Identity = 141/174 (81.03%), Postives = 150/174 (86.21%), Query Frame = 1
Query:    1 VLNATVSTDTYRLTQGLAYGDLARQQLDVYQPSADVGKAPLVVFFYGGSWSSGERADYRFVGEALASRGIVTLVADYRLSPEFRYPAFLQDSARAVRWALEHAIAYGADPARVFVMGHSAGAYNAAMVALDARWLAAEGLRPSRLAGWIGLAGPYDFLPIGDRQTRVAFNWPAT 522
            VLNATV  DTYR TQ L YGD ARQ+LD+YQP A    AP+VVFFYGGSWSSGER DYRFVGEALAS GIV ++ADYRLSPEFRYP F+QDSA AV WA EHA AYGADPAR+FVMGHSAGAYNAAMVALD RWLAA+GL PSRLAGWIGLAGPYDFLPI D QTRVAF+WP T
Sbjct:   29 VLNATVPADTYRRTQDLPYGDHARQRLDIYQPVAGSANAPMVVFFYGGSWSSGERGDYRFVGEALASCGIVAVIADYRLSPEFRYPVFVQDSALAVSWAAEHASAYGADPARIFVMGHSAGAYNAAMVALDPRWLAAQGLAPSRLAGWIGLAGPYDFLPIVDPQTRVAFSWPQT 202          
BLAST of mRNA_P-wetherbeei_contig55421.1.1 vs. uniprot
Match: A0A068YNE3_9BURK (Esterase/lipase/thioesterase family protein n=5 Tax=Polaromonas TaxID=52972 RepID=A0A068YNE3_9BURK)

HSP 1 Score: 286 bits (731), Expect = 3.370e-95
Identity = 140/174 (80.46%), Postives = 153/174 (87.93%), Query Frame = 1
Query:    1 VLNATVSTDTYRLTQGLAYGDLARQQLDVYQPSADVGKAPLVVFFYGGSWSSGERADYRFVGEALASRGIVTLVADYRLSPEFRYPAFLQDSARAVRWALEHAIAYGADPARVFVMGHSAGAYNAAMVALDARWLAAEGLRPSRLAGWIGLAGPYDFLPIGDRQTRVAFNWPAT 522
            +LNATVSTD+YR T+GLAYG   RQ LDVYQP+A V + PLVVFFYGGSWSSGER DYRFVGEALASRGIV +VADYRLSP FRYPAF+QDSA AVRWA++HA  +GAD  R+FVMGHSAGAYNAAMVALDARWLAA GL  +RLAGWIGLAGPYDFLPIGD QTRVAF+WP T
Sbjct:   14 LLNATVSTDSYRRTEGLAYGADPRQLLDVYQPAAGVSRPPLVVFFYGGSWSSGERGDYRFVGEALASRGIVAVVADYRLSPAFRYPAFVQDSASAVRWAVDHAAEFGADEQRIFVMGHSAGAYNAAMVALDARWLAAVGLASARLAGWIGLAGPYDFLPIGDPQTRVAFDWPQT 187          
BLAST of mRNA_P-wetherbeei_contig55421.1.1 vs. uniprot
Match: A0A7Y0GFQ9_9BURK (Alpha/beta hydrolase n=1 Tax=Polaromonas sp. TaxID=1869339 RepID=A0A7Y0GFQ9_9BURK)

HSP 1 Score: 285 bits (728), Expect = 1.250e-94
Identity = 138/174 (79.31%), Postives = 155/174 (89.08%), Query Frame = 1
Query:    1 VLNATVSTDTYRLTQGLAYGDLARQQLDVYQPSADVGKAPLVVFFYGGSWSSGERADYRFVGEALASRGIVTLVADYRLSPEFRYPAFLQDSARAVRWALEHAIAYGADPARVFVMGHSAGAYNAAMVALDARWLAAEGLRPSRLAGWIGLAGPYDFLPIGDRQTRVAFNWPAT 522
            +LNATV+TDTYR T+GL YG  ARQ LDVYQP+  + +APLVVFFYGG+WSSGERADYRFVGEALAS GIV +VADYRLSP FRYPAF+QDSARAV WAL+HA  Y ADPA++FVMGHSAGAYNAAMVALD+RWLAAEGL+P+RLAGWIGLAGPYDFLPI +  +RVAFNWP T
Sbjct:   22 LLNATVATDTYRRTEGLHYGPDARQSLDVYQPAIPLRQAPLVVFFYGGNWSSGERADYRFVGEALASSGIVAMVADYRLSPAFRYPAFVQDSARAVAWALQHAADYDADPAKIFVMGHSAGAYNAAMVALDSRWLAAEGLKPTRLAGWIGLAGPYDFLPIVEPLSRVAFNWPDT 195          
BLAST of mRNA_P-wetherbeei_contig55421.1.1 vs. uniprot
Match: A0A1I7KVM3_9BURK (Acetyl esterase/lipase n=4 Tax=Polaromonas TaxID=52972 RepID=A0A1I7KVM3_9BURK)

HSP 1 Score: 284 bits (727), Expect = 1.670e-94
Identity = 136/174 (78.16%), Postives = 153/174 (87.93%), Query Frame = 1
Query:    1 VLNATVSTDTYRLTQGLAYGDLARQQLDVYQPSADVGKAPLVVFFYGGSWSSGERADYRFVGEALASRGIVTLVADYRLSPEFRYPAFLQDSARAVRWALEHAIAYGADPARVFVMGHSAGAYNAAMVALDARWLAAEGLRPSRLAGWIGLAGPYDFLPIGDRQTRVAFNWPAT 522
            +LNATV+TDTYR T G+AYG   RQ+LDVYQP  ++  AP+VVFFYGGSWS GERADYRFVGEALAS+GIV +VADYRLSP  RYPAF+QDSARAV WA +HA  YGADPAR+FVMGHSAGAYNAAMVALDARWLAAEG++PS+LAGW+GLAGPYDFLPI D QT+VAF WP T
Sbjct:   14 LLNATVATDTYRRTGGIAYGPDPRQRLDVYQPQGELRNAPVVVFFYGGSWSKGERADYRFVGEALASQGIVAVVADYRLSPAVRYPAFVQDSARAVHWARDHAAEYGADPARLFVMGHSAGAYNAAMVALDARWLAAEGMKPSQLAGWMGLAGPYDFLPIADPQTQVAFEWPGT 187          
BLAST of mRNA_P-wetherbeei_contig55421.1.1 vs. uniprot
Match: UPI0019BB2878 (Alpha/beta hydrolase n=1 Tax=Polaromonas sp. TaxID=1869339 RepID=UPI0019BB2878)

HSP 1 Score: 281 bits (718), Expect = 8.360e-94
Identity = 136/174 (78.16%), Postives = 153/174 (87.93%), Query Frame = 1
Query:    1 VLNATVSTDTYRLTQGLAYGDLARQQLDVYQPSADVGKAPLVVFFYGGSWSSGERADYRFVGEALASRGIVTLVADYRLSPEFRYPAFLQDSARAVRWALEHAIAYGADPARVFVMGHSAGAYNAAMVALDARWLAAEGLRPSRLAGWIGLAGPYDFLPIGDRQTRVAFNWPAT 522
            +LNATV+TDTYR T+GLAYG  ARQ+LDVYQP+A + KAP+VVFFYGGSWSSG R DYRFVGEALAS GIV ++ADYRLSP FRYPAF++DSA AVRWA +HA  +G D  R+ VMGHSAGAYNAAM+ALDARWLAA GL P+RLAGWIGLAGPYDFLPIGD QT+VAFNWPAT
Sbjct:   29 LLNATVATDTYRRTEGLAYGPDARQRLDVYQPAAALRKAPMVVFFYGGSWSSGARGDYRFVGEALASCGIVAVLADYRLSPAFRYPAFVEDSAGAVRWAFDHAEQFGVDARRILVMGHSAGAYNAAMLALDARWLAAVGLSPARLAGWIGLAGPYDFLPIGDPQTQVAFNWPAT 202          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55421.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001993CA671.880e-10386.21Alpha/beta hydrolase n=1 Tax=Polaromonas sp. TaxID... [more]
A0A7Y0GHV2_9BURK1.770e-9881.61Alpha/beta hydrolase n=1 Tax=Polaromonas sp. TaxID... [more]
UPI001C3E9A718.910e-9881.03alpha/beta hydrolase n=2 Tax=unclassified Polaromo... [more]
UPI0019B5B53C5.850e-9780.46Alpha/beta hydrolase n=1 Tax=Polaromonas sp. TaxID... [more]
A0A8C8FXV0_ONCTS4.560e-9681.71Abhydrolase_3 domain-containing protein n=1 Tax=On... [more]
A0A1S8FNP2_9BURK1.060e-9581.03Esterase n=1 Tax=Polaromonas sp. A23 TaxID=1944133... [more]
A0A068YNE3_9BURK3.370e-9580.46Esterase/lipase/thioesterase family protein n=5 Ta... [more]
A0A7Y0GFQ9_9BURK1.250e-9479.31Alpha/beta hydrolase n=1 Tax=Polaromonas sp. TaxID... [more]
A0A1I7KVM3_9BURK1.670e-9478.16Acetyl esterase/lipase n=4 Tax=Polaromonas TaxID=5... [more]
UPI0019BB28788.360e-9478.16Alpha/beta hydrolase n=1 Tax=Polaromonas sp. TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig55421contigP-wetherbeei_contig55421:1..522 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1504672.669785310
PFAMsAbhydrolase_3
Model size522
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.52e-96
EggNOG OGsCOG0657@1|root,COG0657@2|Bacteria,1N2XW@1224|Proteobacteria,2VIBB@28216|Betaproteobacteria,4AAPZ@80864|Comamonadaceae
DescriptionCarboxylesterase family
Cds size522
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186825.8243744-CDS-P-wetherbeei_contig55421:0..5221683186825.8243744-CDS-P-wetherbeei_contig55421:0..522Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig55421 1..522 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig55421.1.1prot_P-wetherbeei_contig55421.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig55421 1..522 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig55421.1.1

>prot_P-wetherbeei_contig55421.1.1 ID=prot_P-wetherbeei_contig55421.1.1|Name=mRNA_P-wetherbeei_contig55421.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=174bp
VLNATVSTDTYRLTQGLAYGDLARQQLDVYQPSADVGKAPLVVFFYGGSW
SSGERADYRFVGEALASRGIVTLVADYRLSPEFRYPAFLQDSARAVRWAL
EHAIAYGADPARVFVMGHSAGAYNAAMVALDARWLAAEGLRPSRLAGWIG
LAGPYDFLPIGDRQTRVAFNWPAT
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mRNA from alignment at P-wetherbeei_contig55421:1..522+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig55421.1.1 ID=mRNA_P-wetherbeei_contig55421.1.1|Name=mRNA_P-wetherbeei_contig55421.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=522bp|location=Sequence derived from alignment at P-wetherbeei_contig55421:1..522+ (Phaeothamnion wetherbeei SAG_119_79)
GTGCTCAATGCCACGGTTTCCACCGATACCTATCGTCTGACGCAGGGGCT GGCCTACGGCGACCTGGCACGCCAGCAGCTTGATGTTTACCAGCCCAGCG CCGACGTTGGCAAGGCGCCGCTGGTCGTGTTTTTCTATGGTGGCAGCTGG TCCTCCGGCGAGCGTGCCGACTACCGTTTTGTCGGGGAGGCGCTTGCCTC CCGCGGCATCGTGACGCTGGTGGCCGACTACCGCCTGAGCCCCGAATTTC GTTACCCCGCTTTTTTGCAGGACAGCGCGCGTGCCGTTCGCTGGGCGCTC GAGCATGCGATTGCCTACGGTGCAGATCCGGCCCGCGTTTTTGTGATGGG CCACAGCGCGGGGGCCTACAACGCGGCCATGGTGGCGCTGGATGCGCGCT GGCTGGCGGCGGAGGGGCTGAGGCCTTCGCGCCTGGCGGGCTGGATCGGT CTGGCCGGACCCTATGATTTTTTGCCCATCGGCGACCGCCAGACGCGGGT GGCTTTCAACTGGCCCGCCACC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig55421:1..522+

>mRNA_P-wetherbeei_contig55421.1.1 ID=mRNA_P-wetherbeei_contig55421.1.1|Name=mRNA_P-wetherbeei_contig55421.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=522bp|location=Sequence derived from alignment at P-wetherbeei_contig55421:1..522+ (Phaeothamnion wetherbeei SAG_119_79)
GTGCTCAATGCCACGGTTTCCACCGATACCTATCGTCTGACGCAGGGGCT
GGCCTACGGCGACCTGGCACGCCAGCAGCTTGATGTTTACCAGCCCAGCG
CCGACGTTGGCAAGGCGCCGCTGGTCGTGTTTTTCTATGGTGGCAGCTGG
TCCTCCGGCGAGCGTGCCGACTACCGTTTTGTCGGGGAGGCGCTTGCCTC
CCGCGGCATCGTGACGCTGGTGGCCGACTACCGCCTGAGCCCCGAATTTC
GTTACCCCGCTTTTTTGCAGGACAGCGCGCGTGCCGTTCGCTGGGCGCTC
GAGCATGCGATTGCCTACGGTGCAGATCCGGCCCGCGTTTTTGTGATGGG
CCACAGCGCGGGGGCCTACAACGCGGCCATGGTGGCGCTGGATGCGCGCT
GGCTGGCGGCGGAGGGGCTGAGGCCTTCGCGCCTGGCGGGCTGGATCGGT
CTGGCCGGACCCTATGATTTTTTGCCCATCGGCGACCGCCAGACGCGGGT
GGCTTTCAACTGGCCCGCCACC
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