mRNA_P-wetherbeei_contig5524.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5524.2.1
Unique NamemRNA_P-wetherbeei_contig5524.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5524.2.1 vs. uniprot
Match: A0A259MAP6_9PROT (Orotidine 5'-phosphate decarboxylase n=6 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259MAP6_9PROT)

HSP 1 Score: 460 bits (1183), Expect = 1.580e-159
Identity = 233/250 (93.20%), Postives = 240/250 (96.00%), Query Frame = 1
Query:   10 MRTSSNPVYCGIDTIDLAQATKLIQSIAGGPKPAVGGIKLGLEFFLAHGAPGVRYAFPTPVRATGVGFFLDLKLHDIPNTVAGGIRAVVELAPTFITIHASGGREMMKAAVDEAGVQAAKFNVPRPKLLGVTVLTSLDRSDLEATGVNADPSDQVLRLANLAHGSGLDGVICSPHEIAALRKQCGPDFVLMVPGIRPVGSAANDQKRAMTPRQAVDLGATNLVVGRPIYQAADPRAAAEAIAREAGVNEL 759
            M+  +NPVYC IDTIDLA ATKLIQS+AGGPKPAVGGIKLGLEFFLAHGAPGVRYAFPTPVRATGVGFFLDLKLHDIPNTVAGGIRAVV+LAPTFITIHASGGREMMKAAV+EAG QAAK NV RPKLLGVTVLTSLDRSDLE+TGVNADPSDQVLRLA LAH SGLDGVICSPHEIAALRKQCGPDFVLMVPGIRPVGSAANDQKRAM PRQAVDLGATNLVVGRPIYQAADPRAAAEAIAREAGVN+L
Sbjct:    1 MKARANPVYCSIDTIDLALATKLIQSVAGGPKPAVGGIKLGLEFFLAHGAPGVRYAFPTPVRATGVGFFLDLKLHDIPNTVAGGIRAVVDLAPTFITIHASGGREMMKAAVEEAGSQAAKLNVARPKLLGVTVLTSLDRSDLESTGVNADPSDQVLRLAALAHESGLDGVICSPHEIAALRKQCGPDFVLMVPGIRPVGSAANDQKRAMAPRQAVDLGATNLVVGRPIYQAADPRAAAEAIAREAGVNDL 250          
BLAST of mRNA_P-wetherbeei_contig5524.2.1 vs. uniprot
Match: A0A1H8XK51_9PROT (Orotidine 5'-phosphate decarboxylase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8XK51_9PROT)

HSP 1 Score: 459 bits (1182), Expect = 2.240e-159
Identity = 232/250 (92.80%), Postives = 240/250 (96.00%), Query Frame = 1
Query:   10 MRTSSNPVYCGIDTIDLAQATKLIQSIAGGPKPAVGGIKLGLEFFLAHGAPGVRYAFPTPVRATGVGFFLDLKLHDIPNTVAGGIRAVVELAPTFITIHASGGREMMKAAVDEAGVQAAKFNVPRPKLLGVTVLTSLDRSDLEATGVNADPSDQVLRLANLAHGSGLDGVICSPHEIAALRKQCGPDFVLMVPGIRPVGSAANDQKRAMTPRQAVDLGATNLVVGRPIYQAADPRAAAEAIAREAGVNEL 759
            MRT +NP+YCG+DTIDLAQATKLIQSIAG PKPAVGGIKLGLEFFLAHGAPGVRYAFPTPVRATGVGFFLDLKLHDIPNTVAGGIRAVVELAPTFIT+HASGGREMMKAAV+E   QAAK  VPRPKLLGVTVLTSLDRSDLEATG++ADPSDQVLRLA LAH SGLDGVICSP EIAALRKQCGPDFVLMVPGIRPVGSAANDQKRAMTPRQAVDLGATNLVVGRPIYQAADPRAAAEAIAREAGVN+L
Sbjct:    1 MRTRANPIYCGVDTIDLAQATKLIQSIAGRPKPAVGGIKLGLEFFLAHGAPGVRYAFPTPVRATGVGFFLDLKLHDIPNTVAGGIRAVVELAPTFITLHASGGREMMKAAVEEVAAQAAKHGVPRPKLLGVTVLTSLDRSDLEATGIDADPSDQVLRLAALAHASGLDGVICSPLEIAALRKQCGPDFVLMVPGIRPVGSAANDQKRAMTPRQAVDLGATNLVVGRPIYQAADPRAAAEAIAREAGVNDL 250          
BLAST of mRNA_P-wetherbeei_contig5524.2.1 vs. uniprot
Match: UPI001C21FA60 (orotidine-5'-phosphate decarboxylase n=1 Tax=Reyranella sp. MMS21-HV4-11 TaxID=2849149 RepID=UPI001C21FA60)

HSP 1 Score: 447 bits (1150), Expect = 1.620e-154
Identity = 228/250 (91.20%), Postives = 236/250 (94.40%), Query Frame = 1
Query:   10 MRTSSNPVYCGIDTIDLAQATKLIQSIAGGPKPAVGGIKLGLEFFLAHGAPGVRYAFPTPVRATGVGFFLDLKLHDIPNTVAGGIRAVVELAPTFITIHASGGREMMKAAVDEAGVQAAKFNVPRPKLLGVTVLTSLDRSDLEATGVNADPSDQVLRLANLAHGSGLDGVICSPHEIAALRKQCGPDFVLMVPGIRPVGSAANDQKRAMTPRQAVDLGATNLVVGRPIYQAADPRAAAEAIAREAGVNEL 759
            M+T +NPVYC IDT DLA AT+LIQSIAGGPKPAVGGIKLGLEFFLAHGAPGVRYAFP PVRATGVGFFLDLKLHDIPNTVAGGIRAVVELAPTFITIHA GGREMMKAAVDEAG QAAK NV RP+LLGVTVLTSLDRSDLEATGVNADPSDQV+RLA LA  SGLDGVICSP EI ALRK+CGPDFVLMVPGIRPVGSAANDQKRAMTPRQAVDLGATNLVVGRPIYQ+ADPRAAAEAIAREAGVN+L
Sbjct:    1 MKTCANPVYCSIDTTDLAHATRLIQSIAGGPKPAVGGIKLGLEFFLAHGAPGVRYAFPMPVRATGVGFFLDLKLHDIPNTVAGGIRAVVELAPTFITIHAGGGREMMKAAVDEAGAQAAKQNVARPRLLGVTVLTSLDRSDLEATGVNADPSDQVVRLAALAQESGLDGVICSPLEIEALRKRCGPDFVLMVPGIRPVGSAANDQKRAMTPRQAVDLGATNLVVGRPIYQSADPRAAAEAIAREAGVNDL 250          
BLAST of mRNA_P-wetherbeei_contig5524.2.1 vs. uniprot
Match: A0A6A7MF73_9PROT (Orotidine 5'-phosphate decarboxylase n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A6A7MF73_9PROT)

HSP 1 Score: 440 bits (1131), Expect = 1.200e-151
Identity = 223/248 (89.92%), Postives = 231/248 (93.15%), Query Frame = 1
Query:   16 TSSNPVYCGIDTIDLAQATKLIQSIAGGPKPAVGGIKLGLEFFLAHGAPGVRYAFPTPVRATGVGFFLDLKLHDIPNTVAGGIRAVVELAPTFITIHASGGREMMKAAVDEAGVQAAKFNVPRPKLLGVTVLTSLDRSDLEATGVNADPSDQVLRLANLAHGSGLDGVICSPHEIAALRKQCGPDFVLMVPGIRPVGSAANDQKRAMTPRQAVDLGATNLVVGRPIYQAADPRAAAEAIAREAGVNEL 759
            T +NPVYCGIDT DL  A+KLIQSIAGGPKPAVGGIKLGLEFFLAHGAPGVRYAFP PVRATGVGFFLDLKLHDIPNT AGGIRAV ELAPTFITIH+SGGR+M+KAAV+EAG QAAK  VPRPKLLGVTVLTSLDRSDLEATGVNADPSDQVLRLA L+  SGLDGVICSP EIAALRKQCGPDFVLMVPGIRP GSAANDQKR MTPRQAVDLGATNLVV RPIYQAADPRAAAEAIAREAGVN+L
Sbjct:    2 TRANPVYCGIDTTDLIWASKLIQSIAGGPKPAVGGIKLGLEFFLAHGAPGVRYAFPAPVRATGVGFFLDLKLHDIPNTAAGGIRAVAELAPTFITIHSSGGRDMLKAAVEEAGTQAAKHGVPRPKLLGVTVLTSLDRSDLEATGVNADPSDQVLRLAALSRDSGLDGVICSPLEIAALRKQCGPDFVLMVPGIRPAGSAANDQKRVMTPRQAVDLGATNLVVSRPIYQAADPRAAAEAIAREAGVNDL 249          
BLAST of mRNA_P-wetherbeei_contig5524.2.1 vs. uniprot
Match: A0A521LNY0_9HYPH (Orotidine 5'-phosphate decarboxylase n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521LNY0_9HYPH)

HSP 1 Score: 419 bits (1076), Expect = 2.780e-143
Identity = 208/250 (83.20%), Postives = 228/250 (91.20%), Query Frame = 1
Query:   10 MRTSSNPVYCGIDTIDLAQATKLIQSIAGGPKPAVGGIKLGLEFFLAHGAPGVRYAFPTPVRATGVGFFLDLKLHDIPNTVAGGIRAVVELAPTFITIHASGGREMMKAAVDEAGVQAAKFNVPRPKLLGVTVLTSLDRSDLEATGVNADPSDQVLRLANLAHGSGLDGVICSPHEIAALRKQCGPDFVLMVPGIRPVGSAANDQKRAMTPRQAVDLGATNLVVGRPIYQAADPRAAAEAIAREAGVNEL 759
            M+ S+NPVYCG+DT DL  A +LIQSI G PKPAVGGIKLGLEFFLAHG+PG+RYAFP PVRATGVGFFLDLKLHDIPNTVAGGIRAV +LAPT+ITIH+SGGR+M+KAAVDEAG QAAK  +PR KLLGVTVLTSLD+SDL ATGV+A+PSDQVLRLA LA  +GLDG ICSPHEI ALRKQCGPDFVLMVPGIRPVGS ANDQKRAMTPR+AV LGAT+LVVGRPIY+AADPR AAEAIAREAGVN+L
Sbjct:    1 MKASANPVYCGVDTTDLEGAARLIQSIGGAPKPAVGGIKLGLEFFLAHGSPGIRYAFPAPVRATGVGFFLDLKLHDIPNTVAGGIRAVADLAPTYITIHSSGGRDMLKAAVDEAGNQAAKLGLPRAKLLGVTVLTSLDKSDLVATGVDAEPSDQVLRLAALAREAGLDGCICSPHEIVALRKQCGPDFVLMVPGIRPVGSDANDQKRAMTPREAVSLGATHLVVGRPIYKAADPRVAAEAIAREAGVNDL 250          
BLAST of mRNA_P-wetherbeei_contig5524.2.1 vs. uniprot
Match: A0A5C8PM29_9HYPH (Orotidine 5'-phosphate decarboxylase n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A5C8PM29_9HYPH)

HSP 1 Score: 385 bits (988), Expect = 5.940e-130
Identity = 191/245 (77.96%), Postives = 214/245 (87.35%), Query Frame = 1
Query:   25 NPVYCGIDTIDLAQATKLIQSIAGGPKPAVGGIKLGLEFFLAHGAPGVRYAFPTPVRATGVGFFLDLKLHDIPNTVAGGIRAVVELAPTFITIHASGGREMMKAAVDEAGVQAAKFNVPRPKLLGVTVLTSLDRSDLEATGVNADPSDQVLRLANLAHGSGLDGVICSPHEIAALRKQCGPDFVLMVPGIRPVGSAANDQKRAMTPRQAVDLGATNLVVGRPIYQAADPRAAAEAIAREAGVNEL 759
            NPVYC +DT+DLA+A  LI+ IAGG +PAVGG+KLGLEFFLAHGAPGVRYAFP PVR TG+GFFLDLKLHDIPNTVAGGIRAVV+LAPT+IT+HA+GGR MM+AAV+E G QA K  +PRP+LLGVTVLTSLD  DL ATGV   PSDQV RLA LA  SGLDGVICSPHEIA LR++CGP FVLMVPGIRP GSAA DQKR MTPRQAV LGA++LVVGRPI QA+DPRAAAEAIAR+ GVN++
Sbjct:    5 NPVYCAVDTVDLAEAATLIRRIAGGARPAVGGVKLGLEFFLAHGAPGVRYAFPDPVRLTGIGFFLDLKLHDIPNTVAGGIRAVVDLAPTYITLHAAGGRAMMRAAVEETGAQALKRGLPRPRLLGVTVLTSLDDDDLAATGVGGAPSDQVRRLALLARESGLDGVICSPHEIAPLRQECGPGFVLMVPGIRPQGSAAGDQKRVMTPRQAVALGASHLVVGRPISQASDPRAAAEAIARDVGVNDV 249          
BLAST of mRNA_P-wetherbeei_contig5524.2.1 vs. uniprot
Match: A0A521M4Z1_9HYPH (N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521M4Z1_9HYPH)

HSP 1 Score: 383 bits (983), Expect = 8.800e-130
Identity = 195/211 (92.42%), Postives = 200/211 (94.79%), Query Frame = 3
Query:  759 MSVEAKICGLSTPETLDAAIQGGARWIGFVTYPRSPRHISTELLRTLGARVPKSVGRVGLFVDPDDALLDERLATGAIDMLQLQGAETPARVAELKARTGKSVMKVINVATRADAERGIAAYASVADRLMFEPAGGVLPGGNAKVFDWTILRGLTVPLPWFLAGGLTPDNVAEAVRVTGAPTVDVSSGVESSRGVKSIELIRAFLDRVKAL 1391
            MSVEAKICGLSTPET+DA +QGGARWIGFVTYPRSPRHIST+LLR LG RVPKSVGRVGLFVDPDDALLDERLATGAIDMLQLQGAETP RVAELKARTGK VMKVINVATR DAERGIAAYA VADRLMFEP+GG LPGGNAKVFDW ILRG+TVPLPW LAGGLTPDNVAEAVRVTGA TVDVSSGVESSRGVKSIELIRAFLDRVKAL
Sbjct:    1 MSVEAKICGLSTPETVDAVVQGGARWIGFVTYPRSPRHISTDLLRALGERVPKSVGRVGLFVDPDDALLDERLATGAIDMLQLQGAETPERVAELKARTGKLVMKVINVATREDAERGIAAYAPVADRLMFEPSGGDLPGGNAKVFDWAILRGITVPLPWVLAGGLTPDNVAEAVRVTGARTVDVSSGVESSRGVKSIELIRAFLDRVKAL 211          
BLAST of mRNA_P-wetherbeei_contig5524.2.1 vs. uniprot
Match: A0A1T4SVN4_9HYPH (Orotidine 5'-phosphate decarboxylase n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4SVN4_9HYPH)

HSP 1 Score: 360 bits (924), Expect = 2.840e-120
Identity = 179/246 (72.76%), Postives = 203/246 (82.52%), Query Frame = 1
Query:   10 MRTSSNPVYCGIDTIDLAQATKLIQSIAGGPKPAVGGIKLGLEFFLAHGAPGVRYAFPTPVRATGVGFFLDLKLHDIPNTVAGGIRAVVELAPTFITIHASGGREMMKAAVDEAGVQAAKFNVPRPKLLGVTVLTSLDRSDLEATGVNADPSDQVLRLANLAHGSGLDGVICSPHEIAALRKQCGPDFVLMVPGIRPVGSAANDQKRAMTPRQAVDLGATNLVVGRPIYQAADPRAAAEAIAREAG 747
            M+   NPVYC IDT+DL  A +LI+S+AG   P VGGIKLGLEFFLAHGAPGVRYAFP PVRATG GFFLDLKLHDIPNTVAGGIRAV+EL PT+ITIH +GG  MMKAA + A  +AA+  + RPKLLGVTVLTSLD+SDLEA GV +DP  QVLRLA LA  SGLDGVICSP EIAALR++CG DFVLMVPGIRP G+A  DQKR +TP +AV LGAT+LV+GRPI +AADP  AA+AIAR+ G
Sbjct:    1 MQKRPNPVYCAIDTVDLPLAARLIRSVAGSATPTVGGIKLGLEFFLAHGAPGVRYAFPAPVRATGTGFFLDLKLHDIPNTVAGGIRAVMELEPTYITIHTAGGAAMMKAAAETAAAEAARLGISRPKLLGVTVLTSLDKSDLEAVGVPSDPGQQVLRLAALARASGLDGVICSPLEIAALRRECGGDFVLMVPGIRPAGAATGDQKRVLTPAEAVALGATHLVIGRPITEAADPAVAAQAIARDLG 246          
BLAST of mRNA_P-wetherbeei_contig5524.2.1 vs. uniprot
Match: A0A1F3A7N4_9PROT (N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14 TaxID=1797225 RepID=A0A1F3A7N4_9PROT)

HSP 1 Score: 348 bits (894), Expect = 3.090e-116
Identity = 177/209 (84.69%), Postives = 185/209 (88.52%), Query Frame = 3
Query:  765 VEAKICGLSTPETLDAAIQGGARWIGFVTYPRSPRHISTELLRTLGARVPKSVGRVGLFVDPDDALLDERLATGAIDMLQLQGAETPARVAELKARTGKSVMKVINVATRADAERGIAAYASVADRLMFEPAGGVLPGGNAKVFDWTILRGLTVPLPWFLAGGLTPDNVAEAVRVTGAPTVDVSSGVESSRGVKSIELIRAFLDRVKAL 1391
            VE KICGLSTP+T+DAA+ GGARW+GFVTYPRSPRHISTE+LRTLGARVPKSVGRVGLFVDPDDALLDERLATGAIDMLQL G+ETP RVA +K RTGK VMKVI VA   D ERGIAAYA VADRLMF+ A G LPGGNAK FDWT L G  VPLPW LAGGLTPDNVAEAVRVTGA  VDVSSGVESSRGVKSIELIRAFLDRVKAL
Sbjct:    7 VETKICGLSTPDTVDAAVAGGARWVGFVTYPRSPRHISTEVLRTLGARVPKSVGRVGLFVDPDDALLDERLATGAIDMLQLHGSETPERVAAVKQRTGKPVMKVIKVAKPEDVERGIAAYAPVADRLMFDTADGTLPGGNAKAFDWTTLSGRAVPLPWLLAGGLTPDNVAEAVRVTGARIVDVSSGVESSRGVKSIELIRAFLDRVKAL 215          
BLAST of mRNA_P-wetherbeei_contig5524.2.1 vs. uniprot
Match: A0A1T4SVR9_9HYPH (N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4SVR9_9HYPH)

HSP 1 Score: 341 bits (875), Expect = 2.010e-113
Identity = 169/211 (80.09%), Postives = 184/211 (87.20%), Query Frame = 3
Query:  759 MSVEAKICGLSTPETLDAAIQGGARWIGFVTYPRSPRHISTELLRTLGARVPKSVGRVGLFVDPDDALLDERLATGAIDMLQLQGAETPARVAELKARTGKSVMKVINVATRADAERGIAAYASVADRLMFEPAGGVLPGGNAKVFDWTILRGLTVPLPWFLAGGLTPDNVAEAVRVTGAPTVDVSSGVESSRGVKSIELIRAFLDRVKAL 1391
            M +EAKICGLSTPE +DAA+  GARW+GFVTYPRSPRH+STE +R LGARVP SVGRVGLFVDPDDALLDE+LATGA+D+LQL G+ETP RVA ++ RTGK VMK I VA  AD ERGIAAYA + DRLMF+ A G LPGGNA  FDWTIL G TVP+PWFLAGGLTPDNVAEAVRVTGAP VDVSSGVESSRGVKSIELIRAFLDRVKAL
Sbjct:    1 MGIEAKICGLSTPEAVDAAVAFGARWVGFVTYPRSPRHLSTETMRALGARVPGSVGRVGLFVDPDDALLDEKLATGALDLLQLHGSETPERVAAIRQRTGKPVMKAIKVAQAADVERGIAAYAGIVDRLMFDAAEGTLPGGNATSFDWTILSGRTVPVPWFLAGGLTPDNVAEAVRVTGAPAVDVSSGVESSRGVKSIELIRAFLDRVKAL 211          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5524.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A259MAP6_9PROT1.580e-15993.20Orotidine 5'-phosphate decarboxylase n=6 Tax=Alpha... [more]
A0A1H8XK51_9PROT2.240e-15992.80Orotidine 5'-phosphate decarboxylase n=3 Tax=Alpha... [more]
UPI001C21FA601.620e-15491.20orotidine-5'-phosphate decarboxylase n=1 Tax=Reyra... [more]
A0A6A7MF73_9PROT1.200e-15189.92Orotidine 5'-phosphate decarboxylase n=4 Tax=Alpha... [more]
A0A521LNY0_9HYPH2.780e-14383.20Orotidine 5'-phosphate decarboxylase n=1 Tax=Reyra... [more]
A0A5C8PM29_9HYPH5.940e-13077.96Orotidine 5'-phosphate decarboxylase n=2 Tax=Hypho... [more]
A0A521M4Z1_9HYPH8.800e-13092.42N-(5'-phosphoribosyl)anthranilate isomerase n=1 Ta... [more]
A0A1T4SVN4_9HYPH2.840e-12072.76Orotidine 5'-phosphate decarboxylase n=1 Tax=Enhyd... [more]
A0A1F3A7N4_9PROT3.090e-11684.69N-(5'-phosphoribosyl)anthranilate isomerase n=1 Ta... [more]
A0A1T4SVR9_9HYPH2.010e-11380.09N-(5'-phosphoribosyl)anthranilate isomerase n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5524contigP-wetherbeei_contig5524:711..2101 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1205680.CAKO01000042_gene5385
Preferred namepyrF
PFAMsOMPdecase
Model size1391
Max annot lvl204441|Rhodospirillales
KEGG rclassRC00409
KEGG koko:K01591
KEGG ReactionR00965
KEGG Pathwayko00240,ko01100,map00240,map01100
KEGG ModuleM00051
Hectar predicted targeting categoryother localisation
Exons1
Evalue8.07e-157
EggNOG OGsCOG0284@1|root,COG0284@2|Bacteria,1MW2C@1224|Proteobacteria,2TTB3@28211|Alphaproteobacteria,2JRPW@204441|Rhodospirillales
EC4.1.1.23
DescriptionCatalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
Cds size753
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186823.8809612-UTR-P-wetherbeei_contig5524:710..13391683186823.8809612-UTR-P-wetherbeei_contig5524:710..1339Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5524 711..1339 -
1683186823.9061673-UTR-P-wetherbeei_contig5524:2092..21011683186823.9061673-UTR-P-wetherbeei_contig5524:2092..2101Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5524 2093..2101 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186823.897676-CDS-P-wetherbeei_contig5524:1339..20921683186823.897676-CDS-P-wetherbeei_contig5524:1339..2092Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5524 1340..2092 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5524.2.1prot_P-wetherbeei_contig5524.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5524 1340..2092 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5524.2.1

>prot_P-wetherbeei_contig5524.2.1 ID=prot_P-wetherbeei_contig5524.2.1|Name=mRNA_P-wetherbeei_contig5524.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=251bp
MRTSSNPVYCGIDTIDLAQATKLIQSIAGGPKPAVGGIKLGLEFFLAHGA
PGVRYAFPTPVRATGVGFFLDLKLHDIPNTVAGGIRAVVELAPTFITIHA
SGGREMMKAAVDEAGVQAAKFNVPRPKLLGVTVLTSLDRSDLEATGVNAD
PSDQVLRLANLAHGSGLDGVICSPHEIAALRKQCGPDFVLMVPGIRPVGS
AANDQKRAMTPRQAVDLGATNLVVGRPIYQAADPRAAAEAIAREAGVNEL
*
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mRNA from alignment at P-wetherbeei_contig5524:711..2101-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5524.2.1 ID=mRNA_P-wetherbeei_contig5524.2.1|Name=mRNA_P-wetherbeei_contig5524.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1391bp|location=Sequence derived from alignment at P-wetherbeei_contig5524:711..2101- (Phaeothamnion wetherbeei SAG_119_79)
GCGCCCGCCATGCGAACCAGCTCGAACCCCGTTTATTGCGGCATCGATAC CATCGATCTCGCCCAGGCCACCAAGCTCATCCAGAGCATCGCCGGGGGGC CGAAACCGGCCGTCGGCGGCATCAAGCTGGGGCTGGAATTCTTCCTGGCG CATGGTGCACCGGGGGTACGCTACGCCTTTCCGACCCCGGTCCGCGCCAC CGGCGTGGGCTTCTTCCTCGATCTCAAGCTGCACGACATTCCCAACACCG TGGCCGGCGGCATCCGGGCGGTGGTCGAGCTGGCGCCCACTTTCATCACC ATCCATGCAAGCGGTGGCCGCGAGATGATGAAGGCGGCGGTGGACGAGGC CGGCGTCCAGGCCGCCAAGTTCAATGTGCCGCGGCCCAAGTTGCTGGGTG TCACCGTGCTCACCTCGCTCGACCGGTCCGACCTCGAGGCGACAGGCGTC AATGCCGATCCGTCCGACCAGGTCCTGCGGCTGGCCAACCTGGCCCACGG CAGCGGGCTCGACGGCGTGATCTGCTCGCCGCACGAGATCGCGGCACTGC GCAAACAATGCGGCCCCGATTTCGTGCTGATGGTGCCGGGCATCCGGCCG GTCGGCAGCGCCGCCAACGACCAGAAGCGGGCCATGACGCCACGCCAGGC GGTCGATCTCGGCGCCACCAACCTTGTCGTCGGCCGGCCGATCTACCAGG CGGCCGATCCACGCGCGGCGGCCGAAGCCATCGCCCGCGAGGCCGGCGTC AACGAGCTATGAGCGTCGAGGCCAAAATTTGCGGCCTGTCGACGCCTGAG ACGCTGGATGCTGCGATCCAGGGCGGTGCCCGCTGGATCGGTTTCGTCAC CTATCCGCGCTCGCCGCGGCACATCTCGACCGAGCTGCTGCGTACCTTGG GCGCGCGCGTCCCCAAGAGCGTCGGCCGCGTGGGCCTGTTCGTCGATCCC GACGATGCGCTGCTCGATGAGCGATTGGCGACCGGCGCGATCGACATGCT GCAGCTTCAGGGCGCAGAGACACCGGCGCGCGTCGCCGAGTTGAAGGCGC GGACGGGCAAGTCCGTGATGAAAGTGATCAATGTCGCCACGCGCGCGGAT GCCGAGCGCGGAATCGCGGCCTATGCATCGGTGGCCGACCGGCTGATGTT CGAACCGGCCGGCGGCGTCCTGCCTGGCGGCAACGCCAAGGTCTTCGACT GGACGATTTTGCGCGGTCTCACCGTGCCGCTGCCCTGGTTCCTGGCCGGT GGTCTCACGCCCGACAATGTCGCCGAGGCGGTGCGCGTGACCGGCGCGCC GACGGTAGACGTTTCTTCTGGCGTCGAATCGAGCCGGGGTGTGAAATCGA TCGAACTCATTCGTGCCTTCCTCGATCGGGTGAAGGCGCTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5524:711..2101-

>mRNA_P-wetherbeei_contig5524.2.1 ID=mRNA_P-wetherbeei_contig5524.2.1|Name=mRNA_P-wetherbeei_contig5524.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=753bp|location=Sequence derived from alignment at P-wetherbeei_contig5524:711..2101- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGAACCAGCTCGAACCCCGTTTATTGCGGCATCGATACCATCGATCT
CGCCCAGGCCACCAAGCTCATCCAGAGCATCGCCGGGGGGCCGAAACCGG
CCGTCGGCGGCATCAAGCTGGGGCTGGAATTCTTCCTGGCGCATGGTGCA
CCGGGGGTACGCTACGCCTTTCCGACCCCGGTCCGCGCCACCGGCGTGGG
CTTCTTCCTCGATCTCAAGCTGCACGACATTCCCAACACCGTGGCCGGCG
GCATCCGGGCGGTGGTCGAGCTGGCGCCCACTTTCATCACCATCCATGCA
AGCGGTGGCCGCGAGATGATGAAGGCGGCGGTGGACGAGGCCGGCGTCCA
GGCCGCCAAGTTCAATGTGCCGCGGCCCAAGTTGCTGGGTGTCACCGTGC
TCACCTCGCTCGACCGGTCCGACCTCGAGGCGACAGGCGTCAATGCCGAT
CCGTCCGACCAGGTCCTGCGGCTGGCCAACCTGGCCCACGGCAGCGGGCT
CGACGGCGTGATCTGCTCGCCGCACGAGATCGCGGCACTGCGCAAACAAT
GCGGCCCCGATTTCGTGCTGATGGTGCCGGGCATCCGGCCGGTCGGCAGC
GCCGCCAACGACCAGAAGCGGGCCATGACGCCACGCCAGGCGGTCGATCT
CGGCGCCACCAACCTTGTCGTCGGCCGGCCGATCTACCAGGCGGCCGATC
CACGCGCGGCGGCCGAAGCCATCGCCCGCGAGGCCGGCGTCAACGAGCTA
TGA
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