mRNA_P-wetherbeei_contig5522.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5522.3.1 vs. uniprot
Match: A0A835ZEP2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEP2_9STRA) HSP 1 Score: 226 bits (576), Expect = 9.750e-64 Identity = 158/417 (37.89%), Postives = 226/417 (54.20%), Query Frame = 1
Query: 19 AYSAALGGAVATTWTSLVAWYKLWLLVLTPPLRAVWVCLSDAWPVMRALLVAVWDWQAAQPTTVLLAEIGGVLSLLLLYLLQRFIARRRYVPRARAKVAAVRHRVSKRYHTFIA-------EVEKKSNFAARTLPHACFWIVAVTAAVFAPDLVATVTEGLGWDLLTVFFPVLSTLFLVRGLK--GSPPXXXXXXXXXXXXXXXXXXXRVMSFSTSAGARGSGXXXXXXXXXXXXXGDRASTAPDGRPTAPEVSKALMYWVIFAFLCCCHYVVTMVPFVPRLLERLP-----MLERLALLFFVWLQLPGPVAGIHVVYAVVEPLIQRHIRNVRSAAAVAGSGARAEAAATSRSALRVAVVLRLLSEKQVDVIEENIADSWMLLPCPLFLFTPGFITYGGCVYTGMVVPVLNSIKTLA 1227
AY+ A A + TW SLV W +L L+L P + + WP +RA V + WQ + T +L E + +++ + LL+R++ R R +PRA++ + A R V +R+ + A V KKS AA+ LPH +W VA AA+ P +A ++ G W+ +TV +P+L+T+ L RG K G+ P + G RG+ XXXXXXX G+ P GR V +ALMYW++FA CC YV+ +VP V RL+ L +L +WLQLPG GIH+ YA++EPLI +IR VR A+A A S++ L V LR+LS+++ +I ENIADSWMLLP PL +F+PGF+ GGC+Y G++VP +NS K LA
Sbjct: 83 AYTDAASEAASYTWKSLVGWLRLAHLILKPFIGIANAIGMEIWPFVRAAGVGLARWQVTRSLTFILLEAALIGAVVAMLLLRRYMIRNRLLPRAQSWIEAKRALVRQRHDSAKAAFQQLQRSVAKKSKLAAQMLPHMLYWAVAAAAALLLPAHMAALSLGPAWEFVTVGWPILTTIMLARGRKRSGASPSAALDEGVKGGARPSIRAGT----PSGKGKRGAXXXXXXXXQVAKPKGEEE---PGGR----NVDEALMYWIVFALAQCCAYVLGLVPGVGRLVLSTGTGWGLQLRMWTMLAGIWLQLPGSAGGIHMAYALIEPLIHEYIRAVRPPGG-------ADAVARSKNGLSFLVTLRILSQERASMIAENIADSWMLLPTPLLVFSPGFVVRGGCMYAGLLVPAINSAKALA 481
BLAST of mRNA_P-wetherbeei_contig5522.3.1 vs. uniprot
Match: A0A7S2RWC5_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RWC5_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 4.150e-13 Identity = 98/430 (22.79%), Postives = 175/430 (40.70%), Query Frame = 1
Query: 13 SQAYSAALGGAVATTWTSLVAWYKLWLLVLTPPLRAVWVCLSDAWPVMRALLVAVWDWQAAQPTTVLLAEIGGVLSLLLLYLLQRFIARRRYVPRARAKVAAVRHRVSKRYHTFIAEVEKKSNFAARTLPHACFWIVAVTAAVFAPDLVATVTEGLGWDLLTVFFPVLSTLFLVRGL--------------KGSPPXXXXXXXXXXXXXXXXXXXRVMSFSTSAGARGSGXXXXXXXXXXXXXGDRASTAPDGRPTAPEVSKA----LMYWVIFAFLCCCHYVVTMVPFVPRLLERLPMLERLALLFFVWLQLPGPVAGIHVVYAVVEPLIQRHIRNVRSAAAVAGSGARAEAAATSRSAL-RVAVVLRLLSEKQVDVIEENIADSWMLLPCPL-FLFTPGFITYGGCVYTGMVVPVLNSIKTLARIDAA 1242
S++ A A TTW ++ W ++++ P +V + +++ L+ W++ T + +G VL ++L+++LQR I +RRY R A V ++ RY +F+ V +KS A LPH F + + V P+ +A + GLG ++ FP++ F VR L K S P V + +SA + + D + T V A L YWV + + ++ +P + LP +++ +WLQ+PG +G + + V+ PLI++++ V+ A + R+ L + ++S + + E + LL C L FLF P IT G G+ P+L + + L ++ A
Sbjct: 61 SESVKEAFLAAGETTWLAVKLWAHFVIVIVAPISHETFVFAKVQFLLVQPKLILCWEYFLNTHWTTKVTLLGIVLGVVLVFVLQREIRKRRYFQRVYAWFKGVNDGIASRYRSFVDGVRQKSRTLADLLPHLLFIFIGGSLVVLFPEALAEFSIGLGGWMVVTGFPLI---FGVRSLILYDRKYSEHLAAFKKSKPNIGELEGEENTDAISRARNAVSTVLSSALLGTAPPETGKARAVEQVYLQEYNKLVDSQDTHRSVRVAEISPLEYWVKYWTVVGVVLLLEKLPLTGHAVAMLPFWSEFCVVWSMWLQIPGT-SGAVLAFRVIVPLIEKYLGQVQGA----------NMSTEQRNMLANLLCTFHIISNESSKKLTEILYTGGTLLLCALPFLFMPAAITSIGASLIGIGRPILEASRALYSLELA 476
BLAST of mRNA_P-wetherbeei_contig5522.3.1 vs. uniprot
Match: A0A7S1UC65_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UC65_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 4.660e-10 Identity = 43/121 (35.54%), Postives = 69/121 (57.02%), Query Frame = 1
Query: 148 PVMRALLVAVWDWQAAQPTTVLLAEIGGVLSLLLLYLLQRFIARRRYVPRARAKVAAVRHRVSKRYHTFIAEVEKKSNFAARTLPHACFWIVAVTAAVFAPDLVATVTEGLGWDLLTVFFP 510
P LL A+W+ Q QP VLL E L+L+LLYLLQRF+ ++RY+PR+RA VAA + + +RY+ F++ + + + A PH ++++ + P VA ++ LT+ P
Sbjct: 37 PFALRLLQAIWEHQRRQPWPVLLGEAAVALALVLLYLLQRFVKKKRYIPRSRAFVAARYNALRRRYNHFLSGLRRTNAQLAAAFPHIIALVLSLASWSSFPRTVAELSSSGALTFLTLLLP 157
BLAST of mRNA_P-wetherbeei_contig5522.3.1 vs. uniprot
Match: A0A7S1UCF2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCF2_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 8.630e-10 Identity = 43/121 (35.54%), Postives = 69/121 (57.02%), Query Frame = 1
Query: 148 PVMRALLVAVWDWQAAQPTTVLLAEIGGVLSLLLLYLLQRFIARRRYVPRARAKVAAVRHRVSKRYHTFIAEVEKKSNFAARTLPHACFWIVAVTAAVFAPDLVATVTEGLGWDLLTVFFP 510
P LL A+W+ Q QP VLL E L+L+LLYLLQRF+ ++RY+PR+RA VAA + + +RY+ F++ + + + A PH ++++ + P VA ++ LT+ P
Sbjct: 37 PFALRLLQAIWEHQRRQPWPVLLGEAAVALALVLLYLLQRFVKKKRYIPRSRAFVAARYNALRRRYNHFLSGLRRTNAQLAAAFPHIIALVLSLASWSSFPRTVAELSSSGALTFLTLLLP 157
BLAST of mRNA_P-wetherbeei_contig5522.3.1 vs. uniprot
Match: A0A7S3LQJ1_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LQJ1_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.720e-8 Identity = 90/354 (25.42%), Postives = 148/354 (41.81%), Query Frame = 1
Query: 229 GVLSLLLLYLLQRFIARRRYVPRARAKVAAVRHRVSKRYHTFIAEVEKKSNFAARTLPHACFWIVAVTAAVFAPDLVATVTEGLGWDLLTVFFP-VLSTLFLVRGLKGSPPXXXXXXXXXXXXXXXXXXXRVMSFSTSAGARGSGXXXXXXXXXXXXXGDRASTAPDGRPTAPEVSKA-----------LMYWVIFAFLCCCHYVVTMV-----PFVPRLLERLPMLERLALLFFVWLQLPGPVAGIHVVYAVVEPLIQRHIRNVRSAAAVAGSGARAEAAATSRSALRVAVVLRLLSEKQVDVIEENIADSW-MLLPCPLFLFTPGFITYGGCVYTGMVVPVLNSIKTLARID 1236
G++++ +++LLQR I RR+YV RA K+ + +R + Y+ I E+ +S A +PH F V V VFAP LV ++G+ L+ P VLS+ L + + + + ++S A+G GD+ S+ P V L YW + A + + +MV PF R+L+ P + LLF +WLQ+PG G ++ + + PL+ R+ R V +S L V ++ LL ++E + S +L FLF P F T GC G++ P+ I T+ ++
Sbjct: 196 GLITIFMIWLLQREIKRRKYVQRAYDKIRRLSNRFTDFYNGIIDEIRYESRILAEMVPHLVFAAVTVALLVFAPALVDETSKGVEGRLMMYGVPMVLSSRALFKYERKE-------------LMAIAQQNQDVPETSSKAAKGK-DNSFFSKIYTSLIGDKESSGVYKYTQDPAVLLQSYENLGPVLYWLRYWSVLAAILVIEPLFSMVNTEYTPF--RILKLWP---HVRLLFMLWLQMPGT-NGAYLAFKWIIPLVHRYFRAVN-----------VSDIDVKQSGLFVTLLSSLLGPLNGAKVQEIVGTSGGAILAAMPFLFIP-FTTSLGCTVFGLLRPIHAGIVTILAVE 517
BLAST of mRNA_P-wetherbeei_contig5522.3.1 vs. uniprot
Match: A0A0L0D719_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D719_THETB) HSP 1 Score: 60.5 bits (145), Expect = 3.670e-6 Identity = 109/431 (25.29%), Postives = 161/431 (37.35%), Query Frame = 1
Query: 43 AVATTWTSLVAWYKLWLLVLTPPLRAV-------WVCLSDAWPVMRALLVAVWDWQ----AAQPTTVLLAEIGGVLSLLLLYLLQRFIARRRYVPRARAKVAAVRHRVSKRYHTFIAEVEKKSNFAARTLPHACFWIVAVTAAVFAPDLVATVTEGLGWDLLTV-FFPV-LSTLFLVRGLKGSPPXXXXXXXXXXXXXXXXXXXRVMSFSTSAGARGSGXXXXXXXXXXXXXGDRASTAPDGRPTAPEVSKALMYWVIFAFLCCCHYVVTMVPFVPRLLERLPMLERLALLFF---VWLQLP---GPVAGIHV---VYAVVEPLIQRHIRNVRSAAAVAGSGARAEAAATSRS---ALRVAVVLRLLSEKQVDVIEENIAD-SWMLLPCPLFLFTPGFITYGGCVYTGMVVPVLNSIKTLARIDAARAAGG 1257
AV T ++ AW ++ LV P + +V AW + W W A+QP + E+G + LL+ L RF+ R R +PR V + V++ + A V +S A +LPH FW AVFAP + +T +T+ PV L+ LV+ L RG+ D+ AP R + E L +W ++ + + VPFV ++ E L LL +W LP G G V A V P +R A G + S S AL + +++ ++ + E +A S +LL P+FLFTPGFITY G V G VP+ ++ L R GG
Sbjct: 98 AVGATAVAVGAWLRVLGLVALPLVLGYVYVAAHGYVLARVAWESYSESMAHAWWWLWHQVASQPPAAIALEVGVAVVAALLWGLARFVRRTRIIPRTVRYVNSKAATVARGWQAVTAVVAARSRTLADSLPHVVFWGGVAGGAVFAPSVAFGLTSSTLVRFVTLALVPVGLAARHLVQVLHAE--------------------------------RGA---------------DQQRGAP-ARSSVLESCSWLEFWAVYGGVT----LALAVPFVESMIVAAIGYELLHLLHVAVVLWALLPWTNGSELGARALVPVLAAVTPFGAAASAPLRRRANSGGMLGKLRGLWESLSVATALNALTFMGVMTAERARMTAELLAQASSLLLITPIFLFTPGFITYYGTVLVGYAVPLYATLSALGFSGGNRGRGG 476 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5522.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5522.3.1 >prot_P-wetherbeei_contig5522.3.1 ID=prot_P-wetherbeei_contig5522.3.1|Name=mRNA_P-wetherbeei_contig5522.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=421bp FQNLSQAYSAALGGAVATTWTSLVAWYKLWLLVLTPPLRAVWVCLSDAWPback to top mRNA from alignment at P-wetherbeei_contig5522:2508..3770+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5522.3.1 ID=mRNA_P-wetherbeei_contig5522.3.1|Name=mRNA_P-wetherbeei_contig5522.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1263bp|location=Sequence derived from alignment at P-wetherbeei_contig5522:2508..3770+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5522:2508..3770+ >mRNA_P-wetherbeei_contig5522.3.1 ID=mRNA_P-wetherbeei_contig5522.3.1|Name=mRNA_P-wetherbeei_contig5522.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1263bp|location=Sequence derived from alignment at P-wetherbeei_contig5522:2508..3770+ (Phaeothamnion wetherbeei SAG_119_79)back to top |