prot_P-wetherbeei_contig55215.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig55215.1.1
Unique Nameprot_P-wetherbeei_contig55215.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length168
Homology
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BLAST of mRNA_P-wetherbeei_contig55215.1.1 vs. uniprot
Match: A0A1G0G0U8_9GAMM (Elongation factor P n=1 Tax=Gammaproteobacteria bacterium RBG_16_51_14 TaxID=1798265 RepID=A0A1G0G0U8_9GAMM)

HSP 1 Score: 269 bits (687), Expect = 7.490e-90
Identity = 121/168 (72.02%), Postives = 150/168 (89.29%), Query Frame = 0 
Query:    1 MFDGDPYTIIDNEFVKPGKGQAFNRIKIRNLKTGRTIEKTMKSGDTAEGADVVDLELQFLYTDGEEYHFMNTQTFDQLIAPATAMADAAKWLKGQEMCQVTLWNDAPLNVSPPNFVVLRIIETDPGLRGDTATGGTKPAKMETGAVVKVPLFIEQGDLLKIDTRTGEY 168
            M DGDP+++++NEFVKPGKGQAFNR+K+RNLKTGR +E+T KSGDT EGADVV+L LQ+LY DGE +HFM+T +++Q +A A A+AD A+WLKG+E+C VTLWN +PL+VSPPNFV LRI ETDPG+RGDTA+GG+KPA +ETGAVVKVPLFIE G++LKIDTRTGEY
Sbjct:   16 MIDGDPFSVLENEFVKPGKGQAFNRVKLRNLKTGRVLERTFKSGDTMEGADVVELNLQYLYNDGEMWHFMDTDSYEQYMADAAAVADTAQWLKGEEICMVTLWNGSPLSVSPPNFVSLRITETDPGVRGDTASGGSKPATLETGAVVKVPLFIETGEVLKIDTRTGEY 183
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BLAST of mRNA_P-wetherbeei_contig55215.1.1 vs. uniprot
Match: W6MDD8_9GAMM (Elongation factor P n=13 Tax=Bacteria TaxID=2 RepID=W6MDD8_9GAMM)

HSP 1 Score: 267 bits (683), Expect = 3.040e-89
Identity = 119/168 (70.83%), Postives = 148/168 (88.10%), Query Frame = 0 
Query:    1 MFDGDPYTIIDNEFVKPGKGQAFNRIKIRNLKTGRTIEKTMKSGDTAEGADVVDLELQFLYTDGEEYHFMNTQTFDQLIAPATAMADAAKWLKGQEMCQVTLWNDAPLNVSPPNFVVLRIIETDPGLRGDTATGGTKPAKMETGAVVKVPLFIEQGDLLKIDTRTGEY 168
            M DGDPYTI++NEFVKPGKGQAFNR+K+RNLKTGRTIE+T KSGDTAEGADV D+ELQ+LY DGE +HFM+ Q+++QL A A A+ DAAKWLK + +CQVTLWN  PL+V+ PNFV++ I+ETDPGLRGDT+ GG KPA +ETGAVV+VPLF++ G+++K+DTRTGEY
Sbjct:   16 MLDGDPYTIVENEFVKPGKGQAFNRVKVRNLKTGRTIERTFKSGDTAEGADVADVELQYLYNDGEYWHFMDQQSYEQLTADAAAVGDAAKWLKEEAICQVTLWNGIPLSVAAPNFVIMTIVETDPGLRGDTSGGGGKPATLETGAVVRVPLFVQSGEIIKVDTRTGEY 183
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BLAST of mRNA_P-wetherbeei_contig55215.1.1 vs. uniprot
Match: A0A7C5XLE8_9GAMM (Elongation factor P n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7C5XLE8_9GAMM)

HSP 1 Score: 266 bits (681), Expect = 6.140e-89
Identity = 117/168 (69.64%), Postives = 149/168 (88.69%), Query Frame = 0 
Query:    1 MFDGDPYTIIDNEFVKPGKGQAFNRIKIRNLKTGRTIEKTMKSGDTAEGADVVDLELQFLYTDGEEYHFMNTQTFDQLIAPATAMADAAKWLKGQEMCQVTLWNDAPLNVSPPNFVVLRIIETDPGLRGDTATGGTKPAKMETGAVVKVPLFIEQGDLLKIDTRTGEY 168
            + DG+PY II+NEFVKPGKGQAFNR+K+RNLKTGR I+KT KSG+T E ADVV+  +Q+LYTDGE++HFM+ +T++Q  A A A+ +AAKWLK Q++C +TLWNDAPL V+PPNFVVLR++ETDPG+RGDTA GG KPAK+ETGAVV+VPLF+E+G+L+K+DTRTGEY
Sbjct:   16 ILDGEPYVIIENEFVKPGKGQAFNRVKLRNLKTGRVIDKTFKSGETVEAADVVERPMQYLYTDGEQWHFMDPETYEQYAADANAVGEAAKWLKEQDVCNITLWNDAPLLVTPPNFVVLRVVETDPGVRGDTAQGGNKPAKLETGAVVRVPLFVEEGELIKVDTRTGEY 183
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BLAST of mRNA_P-wetherbeei_contig55215.1.1 vs. uniprot
Match: A0A3S0WCD8_9GAMM (Elongation factor P n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3S0WCD8_9GAMM)

HSP 1 Score: 266 bits (679), Expect = 1.240e-88
Identity = 120/168 (71.43%), Postives = 147/168 (87.50%), Query Frame = 0 
Query:    1 MFDGDPYTIIDNEFVKPGKGQAFNRIKIRNLKTGRTIEKTMKSGDTAEGADVVDLELQFLYTDGEEYHFMNTQTFDQLIAPATAMADAAKWLKGQEMCQVTLWNDAPLNVSPPNFVVLRIIETDPGLRGDTATGGTKPAKMETGAVVKVPLFIEQGDLLKIDTRTGEY 168
            M DGDPY I+DNEFVKPGKGQAFNR K+RNLKTGR IE+T KSGD+ EGADVVD+ELQ+LY+DGE +HFM+ Q+++QL A A+AM DAAKWLK + +CQVTLWN  PL+VSPP FV++ IIETDPGLRGDT+ GG KPA +ETGAVV+VPLF++ G+++K+DTRTGEY
Sbjct:   16 MLDGDPYVIVDNEFVKPGKGQAFNRAKVRNLKTGRVIERTFKSGDSVEGADVVDVELQYLYSDGEHWHFMDQQSYEQLTADASAMGDAAKWLKEEAICQVTLWNGIPLSVSPPIFVIMTIIETDPGLRGDTSGGGGKPATLETGAVVRVPLFVQSGEVIKVDTRTGEY 183
[Close]
BLAST of mRNA_P-wetherbeei_contig55215.1.1 vs. uniprot
Match: G2DWN0_9GAMM (Elongation factor P n=1 Tax=Thiorhodococcus drewsii AZ1 TaxID=765913 RepID=G2DWN0_9GAMM)

HSP 1 Score: 264 bits (674), Expect = 7.390e-88
Identity = 117/168 (69.64%), Postives = 146/168 (86.90%), Query Frame = 0 
Query:    1 MFDGDPYTIIDNEFVKPGKGQAFNRIKIRNLKTGRTIEKTMKSGDTAEGADVVDLELQFLYTDGEEYHFMNTQTFDQLIAPATAMADAAKWLKGQEMCQVTLWNDAPLNVSPPNFVVLRIIETDPGLRGDTATGGTKPAKMETGAVVKVPLFIEQGDLLKIDTRTGEY 168
            M DGDPYTI++NEFVKPGKGQAFNR+++RNLKTGRT+EKT KSGDT E ADV D E+Q+LY DGEE+HFM+ +TF+Q+ A A A+ +AAKW+K  ++C+VTLWN APL+V PPNFVVL I ETDPGL+GDT+ GG KPA +ETGAVV+VPLF++ G+L+K+DTRTGEY
Sbjct:   16 MLDGDPYTIVENEFVKPGKGQAFNRVRVRNLKTGRTVEKTFKSGDTVEAADVHDTEMQYLYNDGEEWHFMHQETFEQMTANAPAVGEAAKWIKDNDICKVTLWNGAPLSVEPPNFVVLEITETDPGLKGDTSGGGGKPATLETGAVVRVPLFVQTGELIKVDTRTGEY 183
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BLAST of mRNA_P-wetherbeei_contig55215.1.1 vs. uniprot
Match: A0A7C1HE80_9GAMM (Elongation factor P n=1 Tax=Thioalkalivibrio sp. TaxID=2093813 RepID=A0A7C1HE80_9GAMM)

HSP 1 Score: 263 bits (673), Expect = 1.010e-87
Identity = 119/168 (70.83%), Postives = 147/168 (87.50%), Query Frame = 0 
Query:    1 MFDGDPYTIIDNEFVKPGKGQAFNRIKIRNLKTGRTIEKTMKSGDTAEGADVVDLELQFLYTDGEEYHFMNTQTFDQLIAPATAMADAAKWLKGQEMCQVTLWNDAPLNVSPPNFVVLRIIETDPGLRGDTATGGTKPAKMETGAVVKVPLFIEQGDLLKIDTRTGEY 168
            M DGDPYTI++NEFVKPGKGQAFNR++IRNLKTGR IE+T KSG++ E ADVVD ++Q+LY+DGE +HFM   TF+Q  A   A+ADA +WLK Q+ C VTLWN+APL+V+PPNF+  RI+ETDPGLRGDTATGGTKPAK+ETGAVVKVPLFIE+G+++K+DTR+GEY
Sbjct:   16 MLDGDPYTIVENEFVKPGKGQAFNRVRIRNLKTGRVIERTFKSGESVEAADVVDTDMQYLYSDGEFWHFMVPDTFEQYAAGEAAVADAKQWLKEQDTCIVTLWNNAPLSVAPPNFIEARIVETDPGLRGDTATGGTKPAKLETGAVVKVPLFIEEGEIIKVDTRSGEY 183
[Close]
BLAST of mRNA_P-wetherbeei_contig55215.1.1 vs. uniprot
Match: A0A3D5DAX8_9GAMM (Elongation factor P n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DAX8_9GAMM)

HSP 1 Score: 263 bits (673), Expect = 1.050e-87
Identity = 121/168 (72.02%), Postives = 144/168 (85.71%), Query Frame = 0 
Query:    1 MFDGDPYTIIDNEFVKPGKGQAFNRIKIRNLKTGRTIEKTMKSGDTAEGADVVDLELQFLYTDGEEYHFMNTQTFDQLIAPATAMADAAKWLKGQEMCQVTLWNDAPLNVSPPNFVVLRIIETDPGLRGDTATGGTKPAKMETGAVVKVPLFIEQGDLLKIDTRTGEY 168
            M DGDP++II+N+ VKPGKGQAFNRIKIRNLKTGR IEKT KSG++ E ADV++ E+QF Y+DGE + FM+T+TF+QLIA  TAM D  KWLKGQEMC VTLWN+ P+ V  PNF  LR+ +TDPG+RGDTA+GGTKPA +ETGA+VKVPLFIE+GDLLKIDTRTGEY
Sbjct:   16 MLDGDPFSIIENDIVKPGKGQAFNRIKIRNLKTGRVIEKTFKSGESVEAADVIETEMQFSYSDGETWTFMDTETFEQLIASKTAMGDGVKWLKGQEMCTVTLWNNEPIAVVSPNFATLRVTQTDPGVRGDTASGGTKPATLETGAIVKVPLFIEEGDLLKIDTRTGEY 183
[Close]
BLAST of mRNA_P-wetherbeei_contig55215.1.1 vs. uniprot
Match: A0A2G6DFT5_9PROT (Elongation factor P n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2G6DFT5_9PROT)

HSP 1 Score: 263 bits (673), Expect = 1.120e-87
Identity = 119/169 (70.41%), Postives = 151/169 (89.35%), Query Frame = 0 
Query:    1 MFDGDPYTIIDNEFVKPGKGQAFNRIKIRNLKTGRTIEKTMKSGDTAEGADVVDLELQFLYTDGEEYHFMNTQ-TFDQLIAPATAMADAAKWLKGQEMCQVTLWNDAPLNVSPPNFVVLRIIETDPGLRGDTATGGTKPAKMETGAVVKVPLFIEQGDLLKIDTRTGEY 168
            M DGDPYTI++NEFVKPGKGQAFNR+++RNLKTGRT+EKT KSGD+ E ADV+D E+++LY+DGE +HFM T  +F+Q  AP +AM +AAKWLKG E+CQV LW+DAPL+V PPNFV LRI+ETDPG++GDTA+GG+KPAK+ETGAVVKVPL+++Q ++L+IDTRTGEY
Sbjct:   16 MIDGDPYTIVENEFVKPGKGQAFNRVRVRNLKTGRTVEKTWKSGDSVEAADVMDREMEYLYSDGEFWHFMATDGSFEQFAAPESAMLEAAKWLKGNEICQVILWDDAPLSVVPPNFVELRIVETDPGVKGDTASGGSKPAKLETGAVVKVPLYMDQDEVLRIDTRTGEY 184
[Close]
BLAST of mRNA_P-wetherbeei_contig55215.1.1 vs. uniprot
Match: A0A3M1WFZ4_9GAMM (Elongation factor P n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1WFZ4_9GAMM)

HSP 1 Score: 262 bits (670), Expect = 2.910e-87
Identity = 120/168 (71.43%), Postives = 147/168 (87.50%), Query Frame = 0 
Query:    1 MFDGDPYTIIDNEFVKPGKGQAFNRIKIRNLKTGRTIEKTMKSGDTAEGADVVDLELQFLYTDGEEYHFMNTQTFDQLIAPATAMADAAKWLKGQEMCQVTLWNDAPLNVSPPNFVVLRIIETDPGLRGDTATGGTKPAKMETGAVVKVPLFIEQGDLLKIDTRTGEY 168
            M DGDPY+II NEFVKPGKGQAFNR+K+RNLKTGR I+KT KSG++ E ADVVD ++Q+LYTDGE ++FM+  TF+Q+ AP TA+ADA KWLK Q++CQVTLWN APL V+PPNFV L++ +T+PG+RGDTATG TKPA +ETGA V+VPLFIE+GD+LKIDTRTGEY
Sbjct:   16 MLDGDPYSIISNEFVKPGKGQAFNRVKLRNLKTGRVIDKTFKSGESVEAADVVDTDMQYLYTDGEFWYFMDPNTFEQVGAPETAVADAMKWLKEQDLCQVTLWNGAPLTVTPPNFVELKVTQTEPGVRGDTATGATKPAIVETGAEVRVPLFIEEGDVLKIDTRTGEY 183
[Close]
BLAST of mRNA_P-wetherbeei_contig55215.1.1 vs. uniprot
Match: A0A1S9CWH9_9GAMM (Elongation factor P n=1 Tax=Chromatiales bacterium USCg_Taylor TaxID=1934255 RepID=A0A1S9CWH9_9GAMM)

HSP 1 Score: 262 bits (669), Expect = 4.130e-87
Identity = 122/168 (72.62%), Postives = 142/168 (84.52%), Query Frame = 0 
Query:    1 MFDGDPYTIIDNEFVKPGKGQAFNRIKIRNLKTGRTIEKTMKSGDTAEGADVVDLELQFLYTDGEEYHFMNTQTFDQLIAPATAMADAAKWLKGQEMCQVTLWNDAPLNVSPPNFVVLRIIETDPGLRGDTATGGTKPAKMETGAVVKVPLFIEQGDLLKIDTRTGEY 168
            M DG P  I++NEFVKPGKGQAFNR+KIRNLKTGR IE+T KSGDT EGADVVD E+Q+LY+DGE +HFM+  +F+QL A  T MADA +WLKGQE C VTLWN  PL+V+PPNFV+L I ETDPG+RGDTATGGTKPA +ETGAVVKVPLF+E  +L+KIDTRTG Y
Sbjct:   16 MLDGSPCAIVENEFVKPGKGQAFNRVKIRNLKTGRVIERTFKSGDTLEGADVVDREMQYLYSDGEYWHFMDAASFEQLSASETTMADARQWLKGQESCVVTLWNGEPLSVAPPNFVILEITETDPGIRGDTATGGTKPATLETGAVVKVPLFVEVHELIKIDTRTGAY 183
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55215.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1G0G0U8_9GAMM7.490e-9072.02Elongation factor P n=1 Tax=Gammaproteobacteria ba... [more]
W6MDD8_9GAMM3.040e-8970.83Elongation factor P n=13 Tax=Bacteria TaxID=2 RepI... [more]
A0A7C5XLE8_9GAMM6.140e-8969.64Elongation factor P n=1 Tax=Chromatiales bacterium... [more]
A0A3S0WCD8_9GAMM1.240e-8871.43Elongation factor P n=1 Tax=Candidatus Competibact... [more]
G2DWN0_9GAMM7.390e-8869.64Elongation factor P n=1 Tax=Thiorhodococcus drewsi... [more]
A0A7C1HE80_9GAMM1.010e-8770.83Elongation factor P n=1 Tax=Thioalkalivibrio sp. T... [more]
A0A3D5DAX8_9GAMM1.050e-8772.02Elongation factor P n=1 Tax=Gammaproteobacteria ba... [more]
A0A2G6DFT5_9PROT1.120e-8770.41Elongation factor P n=1 Tax=Proteobacteria bacteri... [more]
A0A3M1WFZ4_9GAMM2.910e-8771.43Elongation factor P n=1 Tax=Gammaproteobacteria ba... [more]
A0A1S9CWH9_9GAMM4.130e-8772.62Elongation factor P n=1 Tax=Chromatiales bacterium... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 168..168
NoneNo IPR availablePANTHERPTHR30053:SF1ELONGATION FACTOR Pcoord: 1..168
IPR001059Translation elongation factor P/YeiP, centralSMARTSM01185EFP_2coord: 54..108
e-value: 2.2E-21
score: 87.1
IPR001059Translation elongation factor P/YeiP, centralPFAMPF01132EFPcoord: 56..108
e-value: 1.5E-19
score: 69.8
IPR001059Translation elongation factor P/YeiP, centralCDDcd04470S1_EF-P_repeat_1coord: 56..113
e-value: 5.25466E-18
score: 71.7203
IPR015365Elongation factor P, C-terminalSMARTSM00841Elong_fact_P_C_2coord: 116..168
e-value: 3.5E-28
score: 109.6
IPR015365Elongation factor P, C-terminalPFAMPF09285Elong-fact-P_Ccoord: 116..168
e-value: 5.6E-25
score: 86.9
IPR015365Elongation factor P, C-terminalCDDcd05794S1_EF-P_repeat_2coord: 116..168
e-value: 6.50154E-28
score: 96.8242
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 51..114
e-value: 1.7E-24
score: 87.6
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 115..168
e-value: 9.0E-25
score: 88.1
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 55..113
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 115..168
IPR011768Translation elongation factor PTIGRFAMTIGR00038TIGR00038coord: 2..168
e-value: 2.9E-68
score: 227.1
IPR011768Translation elongation factor PHAMAPMF_00141EF_Pcoord: 1..168
score: 42.287727
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 1..43
e-value: 3.9E-23
score: 82.8
IPR020599Translation elongation factor P/YeiPPIRSFPIRSF005901EF-Pcoord: 1..168
e-value: 1.8E-60
score: 201.7
IPR020599Translation elongation factor P/YeiPPANTHERPTHR30053ELONGATION FACTOR Pcoord: 1..168
IPR013185Translation elongation factor, KOW-likePFAMPF08207EFP_Ncoord: 1..46
e-value: 4.0E-20
score: 71.6
IPR013852Translation elongation factor P/YeiP, conserved sitePROSITEPS01275EFPcoord: 137..156
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 1..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig55215contigP-wetherbeei_contig55215:1..504 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig55215.1.1mRNA_P-wetherbeei_contig55215.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig55215 1..525 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig55215.1.1 ID=prot_P-wetherbeei_contig55215.1.1|Name=mRNA_P-wetherbeei_contig55215.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=168bp
MFDGDPYTIIDNEFVKPGKGQAFNRIKIRNLKTGRTIEKTMKSGDTAEGA
DVVDLELQFLYTDGEEYHFMNTQTFDQLIAPATAMADAAKWLKGQEMCQV
TLWNDAPLNVSPPNFVVLRIIETDPGLRGDTATGGTKPAKMETGAVVKVP
LFIEQGDLLKIDTRTGEY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001059Transl_elong_P/YeiP_cen
IPR015365Elong-fact-P_C
IPR012340NA-bd_OB-fold
IPR011768Transl_elongation_fac_P
IPR014722Rib_L2_dom2
IPR020599Transl_elong_fac_P/YeiP
IPR013185Transl_elong_KOW-like
IPR013852Transl_elong_P/YeiP_CS
IPR008991Translation_prot_SH3-like_sf