mRNA_P-wetherbeei_contig5521.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5521.2.1
Unique NamemRNA_P-wetherbeei_contig5521.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5521.2.1 vs. uniprot
Match: A0A835Z4P1_9STRA (Histidine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4P1_9STRA)

HSP 1 Score: 456 bits (1172), Expect = 1.470e-157
Identity = 217/281 (77.22%), Postives = 250/281 (88.97%), Query Frame = 1
Query:   94 LDLAPPKGTRDMFPEDMRLRTWLFGQWRDVARRFGFEEYDAPVLESEALYVRKSGEEVTQQLYNFEDKGGRRVALRPEMTPSLARMVMSRRGALTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGISGVEAEAELLAAVVAFFEGVGITAADVGLRVNSRGVLTEVLTALGVPLSRHAATCVLVDKLEKVPLDAIRGDMAELGLEEPIIQRLLEIMAMKDLAAVEAALGTQSQALQELRKLFMLAEAHGFADWLVYDASVVRGLAYYTGIVFEGFDR 936
            +D  P KGTRDM+PEDMRLRTWLFG WR VA ++GFEEYDAPVLESEALYVRKSGEEVTQQLYNFEDKG RRVALRPEMTPSLARM+M+RR  +TLPVKWFS+PQCWRYERMTRGRRREHYQWNMDIWG+ GVEAEAELLAAVV+FF  +GIT+ADVG++VNSR  L E++T+LGVP ++HAATCVLVDKLEKVPLDA+R DMA LGL +  + +LL +M  K + A+EAA+G  S A++ELR+LF LAEA+G+ADWLV+DASVVRGLAYYTGIVFEGFDR
Sbjct:    1 MDANPVKGTRDMYPEDMRLRTWLFGHWRKVAEQYGFEEYDAPVLESEALYVRKSGEEVTQQLYNFEDKGERRVALRPEMTPSLARMIMARRNGVTLPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVQGVEAEAELLAAVVSFFTNIGITSADVGMKVNSRAALGEIMTSLGVPEAKHAATCVLVDKLEKVPLDALRSDMAALGLTDETVTKLLAVMESKSIDALEAAVGADSAAVRELRRLFELAEAYGYADWLVFDASVVRGLAYYTGIVFEGFDR 281          
BLAST of mRNA_P-wetherbeei_contig5521.2.1 vs. uniprot
Match: D7G621_ECTSI (Histidine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G621_ECTSI)

HSP 1 Score: 456 bits (1172), Expect = 2.010e-155
Identity = 221/287 (77.00%), Postives = 250/287 (87.11%), Query Frame = 1
Query:   79 APAEKLDLAPPKGTRDMFPEDMRLRTWLFGQWRDVARRFGFEEYDAPVLESEALYVRKSGEEVTQQLYNFEDKGGRRVALRPEMTPSLARMVMSRRGALTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGISGVEAEAELLAAVVAFFEGVGITAADVGLRVNSRGVLTEVLTALGVPLSRHAATCVLVDKLEKVPLDAIRGDMAELGLEEPIIQRLLEIMAMKDLAAVEAALGTQSQALQELRKLFMLAEAHGFADWLVYDASVVRGLAYYTGIVFEGFDRQ 939
            A  EKLDL PPKGTRD+FPEDMRLR WLFG WR VA  FGFEEYDAPVLESE+LY RKSGEEVTQQLY FEDKGGRRV+LRPEMTPSLARMVM++R +LTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWG+SGV AEAELL A+V FFE VG+ A DVG+RVNSRGVLTEVL +LGVP  +H ATCVLVDKL+K+PL+A+ GD+AELGLEE  ++RLLE+M ++D+  VEA LG +S A +ELRKLF LAE++G +DWLV D SVVRGLAYYTG VFE FDR+
Sbjct:  134 AAVEKLDLKPPKGTRDVFPEDMRLRNWLFGHWRGVASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVSGVAAEAELLGAMVTFFERVGLRAEDVGIRVNSRGVLTEVLHSLGVPGDKHTATCVLVDKLDKMPLEAVAGDLAELGLEETSVKRLLEVMELRDMGGVEAFLGKESPAAEELRKLFALAESYGISDWLVLDCSVVRGLAYYTGTVFEAFDRR 420          
BLAST of mRNA_P-wetherbeei_contig5521.2.1 vs. uniprot
Match: L1K527_GUITC (Histidine--tRNA ligase n=2 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K527_GUITC)

HSP 1 Score: 450 bits (1157), Expect = 3.990e-154
Identity = 221/308 (71.75%), Postives = 260/308 (84.42%), Query Frame = 1
Query:   16 TAGGRVSAAVKQDAQRQAAKPAPAEKLDLAPPKGTRDMFPEDMRLRTWLFGQWRDVARRFGFEEYDAPVLESEALYVRKSGEEVTQQLYNFEDKGGRRVALRPEMTPSLARMVMSRRGALTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGISGVEAEAELLAAVVAFFEGVGITAADVGLRVNSRGVLTEVLTALGVPLSRHAATCVLVDKLEKVPLDAIRGDMAELGLEEPIIQRLLEIMAMKDLAAVEAALGTQSQALQELRKLFMLAEAHGFADWLVYDASVVRGLAYYTGIVFEGFDRQ 939
            T+ GR SAAV Q  ++   K    EKLDL PPKGTRD +PEDMR+R WLFG W+DVAR  GFEEYDAPVLESE LY+RK+GEEVTQQLYNFEDKG RRV+LRPEMTPSLARMVM+R  +LTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWG+ G+EAEAELL+A+V FF+ VGIT+ DVG++VNSR VL+EVLTA+GVP  + AATCVLVDKLEKV LD IRG+M ELGL + II +L+  +++KDL A+E  LG  S+AL +L++L   AEA+GF DWL++DASVVRGLAYYTG+VFEGFDR+
Sbjct:   54 TSQGRASAAVAQSKEKSTGK---KEKLDLKPPKGTRDFYPEDMRMRNWLFGHWKDVARLHGFEEYDAPVLESEELYIRKAGEEVTQQLYNFEDKGERRVSLRPEMTPSLARMVMARGKSLTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVPGIEAEAELLSAIVTFFKRVGITSQDVGIKVNSRAVLSEVLTAMGVPADKFAATCVLVDKLEKVKLDDIRGEMQELGLTDEIITKLVATLSIKDLDALEQTLGNGSKALAQLKQLMEYAEAYGFRDWLIFDASVVRGLAYYTGVVFEGFDRK 358          
BLAST of mRNA_P-wetherbeei_contig5521.2.1 vs. uniprot
Match: W7U324_9STRA (Histidine--tRNA ligase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U324_9STRA)

HSP 1 Score: 427 bits (1097), Expect = 2.160e-144
Identity = 211/308 (68.51%), Postives = 254/308 (82.47%), Query Frame = 1
Query:   22 GGRVSAAVKQDAQ--RQAAKPAPAEKLDLAPPKGTRDMFPEDMRLRTWLFGQWRDVARRFGFEEYDAPVLESEALYVRKSGEEVTQQLYNFEDKGGRRVALRPEMTPSLARMVMSRRGALTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGISGVEAEAELLAAVVAFFEGVGITAADVGLRVNSRGVLTEVLTALGVPLSRHAATCVLVDKLEKVPLDAIRGDMAELGLEEPIIQRLLEIMAMKDLAAVEAALGTQSQALQELRKLFMLAEAHGFADWLVYDASVVRGLAYYTGIVFEGFDRQ 939
            G R SAAV QD +  R+  K     KLDL PP+GTRD +PEDMR R+WLF  WR VAR   FEEYDAPVLESE L+VRK+GEEVT+QLYNFEDKGGRRVALRPEMTPSLARMVM++R  L +PVKWFS PQCWRYERMTRGRRREHYQWNMD+WG+SGVEAEAELL+A+  FF+ VG+TA DVG++V+SRGVL EVL AL VP ++ +ATCVLVDKLEK+PL+AI+GD+  LGLEE +++RLL+++  +D  ++E A+G +S AL +LR+LF  A A+ F +WLV DASVVRGLAYYTGIVFE FDR+
Sbjct:   86 GSRGSAAVAQDLKNSRETQKERQG-KLDLNPPRGTRDFYPEDMRTRSWLFELWRQVARDHAFEEYDAPVLESEDLFVRKAGEEVTEQLYNFEDKGGRRVALRPEMTPSLARMVMAKRNGLVMPVKWFSFPQCWRYERMTRGRRREHYQWNMDVWGVSGVEAEAELLSAITTFFKRVGLTAEDVGIKVSSRGVLAEVLAALDVPDAKFSATCVLVDKLEKLPLEAIQGDLTALGLEESVVRRLLDVVQSRDFPSLETAIGAKSTALAQLRQLFEYARAYNFEEWLVLDASVVRGLAYYTGIVFEAFDRK 392          
BLAST of mRNA_P-wetherbeei_contig5521.2.1 vs. uniprot
Match: A0A7S2V328_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V328_9STRA)

HSP 1 Score: 422 bits (1084), Expect = 2.330e-144
Identity = 202/282 (71.63%), Postives = 239/282 (84.75%), Query Frame = 1
Query:   94 LDLAPPKGTRDMFPEDMRLRTWLFGQWRDVARRFGFEEYDAPVLESEALYVRKSGEEVTQQLYNFEDKGGRRVALRPEMTPSLARMVMSRRGALTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGISGVEAEAELLAAVVAFFEGVGITAADVGLRVNSRGVLTEVLTALGVPLSRHAATCVLVDKLEKVPLDAIRGDMAELGLEEPIIQRLLEIMAMKDLAAVEAALGTQSQALQELRKLFMLAEAHGFADWLVYDASVVRGLAYYTGIVFEGFDRQ 939
            LDLAPP+GTRD +P DMRLR WL   WRD AR+FGF+EYDAPVLE+E LY RKSGEEVTQQLY FEDKGGRRVALRPEMTPSLARMV++++G L +P+KWFS PQCWRYERMTRGRRREH+QWNMDIWG+SGVEAEAELL A+V+F    G+++ADVG++VNSR VL EVLT+LGVP    AATCVLVDKLEKV L+ I+G++  LGL E II RL+E+MA KDL  +   +G  SQALQ+LR+LF L EA+G+ +WLV+DASVVRGLAYYTG+VFE FDR+
Sbjct:   77 LDLAPPRGTRDFYPADMRLRQWLHTLWRDTARQFGFQEYDAPVLENEPLYTRKSGEEVTQQLYGFEDKGGRRVALRPEMTPSLARMVLAKKGGLQMPIKWFSTPQCWRYERMTRGRRREHFQWNMDIWGLSGVEAEAELLGAMVSFLMRAGLSSADVGIKVNSRAVLGEVLTSLGVPEESFAATCVLVDKLEKVKLEDIQGELEGLGLTEEIITRLVEVMANKDLDKIAEVVGEDSQALQDLRQLFRLGEAYGYNEWLVFDASVVRGLAYYTGVVFEAFDRE 358          
BLAST of mRNA_P-wetherbeei_contig5521.2.1 vs. uniprot
Match: A0A6U3RP29_9STRA (Histidine--tRNA ligase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RP29_9STRA)

HSP 1 Score: 423 bits (1088), Expect = 1.300e-143
Identity = 209/313 (66.77%), Postives = 250/313 (79.87%), Query Frame = 1
Query:   22 GGRVSAAVKQ-------DAQRQAAKPAPAEKLDLAPPKGTRDMFPEDMRLRTWLFGQWRDVARRFGFEEYDAPVLESEALYVRKSGEEVTQQLYNFEDKGGRRVALRPEMTPSLARMVMSRRGALTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGISGVEAEAELLAAVVAFFEGVGITAADVGLRVNSRGVLTEVLTALGVPLSRHAATCVLVDKLEKVPLDAIRGDMAELGLEEPIIQRLLEIMAMKDLAAVEAALGTQSQALQELRKLFMLAEAHGFADWLVYDASVVRGLAYYTGIVFEGFDRQ 939
            GGRVSA VK        D  +   K    ++LD  PPKGTRD +PEDMRLRTWLF  WR VA  +GF EYDAPVLESEALY RK+GEEVTQQLYNF DKG R VALRPEMTPSLARMVM+++G L LP+KW SIPQCWRYERMTRGRRREH+QWNMD+WG+ GVEAEAELL+A+V FFE VG+T+ DVG++VNSR V+TEVLT LGVP  + AATCVLVDKLEKVPLDAI+ D+ ELGLE  ++++LLE++    L ++ + LG +S A+++L +LF L EA+G  DW++ DASVVRGLAYYTGIVFE FDR+
Sbjct:   55 GGRVSAGVKDTNILDKTDTSKSMKK---QKQLDTNPPKGTRDFYPEDMRLRTWLFDHWRSVASTYGFSEYDAPVLESEALYTRKAGEEVTQQLYNFMDKGDRAVALRPEMTPSLARMVMAKKGGLNLPLKWHSIPQCWRYERMTRGRRREHFQWNMDVWGVQGVEAEAELLSAMVTFFENVGLTSDDVGIKVNSRLVITEVLTELGVPEDKFAATCVLVDKLEKVPLDAIQDDLTELGLERDVVEKLLEVLTNNSLESLSSVLGAESNAVKQLTELFDLCEAYGIQDWVLLDASVVRGLAYYTGIVFEAFDRK 364          
BLAST of mRNA_P-wetherbeei_contig5521.2.1 vs. uniprot
Match: A0A6U3ZLG2_9STRA (Histidine--tRNA ligase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3ZLG2_9STRA)

HSP 1 Score: 422 bits (1085), Expect = 4.200e-143
Identity = 198/282 (70.21%), Postives = 238/282 (84.40%), Query Frame = 1
Query:   94 LDLAPPKGTRDMFPEDMRLRTWLFGQWRDVARRFGFEEYDAPVLESEALYVRKSGEEVTQQLYNFEDKGGRRVALRPEMTPSLARMVMSRRGALTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGISGVEAEAELLAAVVAFFEGVGITAADVGLRVNSRGVLTEVLTALGVPLSRHAATCVLVDKLEKVPLDAIRGDMAELGLEEPIIQRLLEIMAMKDLAAVEAALGTQSQALQELRKLFMLAEAHGFADWLVYDASVVRGLAYYTGIVFEGFDRQ 939
            LD  PPKGTRD +P DMRL++WLF QWR VA  +GF EYDAPVLESE+LY RK+GEEVTQQLYNFEDKGGR VALRPEMTPSLARMVM+++G L LP+KW+SIPQCWRYERMTRGRRREHYQWNMDIWG+ G+EAEAELL+A+V FF+ VG+TA DVG++VNSR V+ EVLT LGVP  + AATCVLVDKLEKVPLDAI+G++ ELGLE  +I++L E++    + ++ A L   S+A+QEL KLF L  A+G  DW+++DASVVRGLAYYTG+VFE FDR+
Sbjct:   84 LDTNPPKGTRDFYPADMRLQSWLFNQWRQVAATYGFSEYDAPVLESESLYTRKAGEEVTQQLYNFEDKGGRNVALRPEMTPSLARMVMAKKGGLPLPLKWYSIPQCWRYERMTRGRRREHYQWNMDIWGVDGIEAEAELLSAMVMFFKNVGLTADDVGIKVNSRNVIGEVLTELGVPEEKFAATCVLVDKLEKVPLDAIQGELEELGLERSMIEKLTEVLTNTSIESISAVLPDDSKAVQELTKLFDLCNAYGIGDWIMFDASVVRGLAYYTGVVFEAFDRK 365          
BLAST of mRNA_P-wetherbeei_contig5521.2.1 vs. uniprot
Match: B7GDK8_PHATC (Histidine--tRNA ligase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GDK8_PHATC)

HSP 1 Score: 417 bits (1073), Expect = 1.870e-141
Identity = 203/316 (64.24%), Postives = 253/316 (80.06%), Query Frame = 1
Query:   22 GGRVSAAV----------KQDAQRQAAKPAPAEKLDLAPPKGTRDMFPEDMRLRTWLFGQWRDVARRFGFEEYDAPVLESEALYVRKSGEEVTQQLYNFEDKGGRRVALRPEMTPSLARMVMSRRGALTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGISGVEAEAELLAAVVAFFEGVGITAADVGLRVNSRGVLTEVLTALGVPLSRHAATCVLVDKLEKVPLDAIRGDMAELGLEEPIIQRLLEIMAMKDLAAVEAALGTQSQALQELRKLFMLAEAHGFADWLVYDASVVRGLAYYTGIVFEGFDRQ 939
            GGRVS AV          KQD+ +Q  +P    +LD  PPKGTRD +P+DMRLRTWLF  WR VA+ FGF EYDAPVLESEALYVRK+GEEVT QLYNF DKG R VALRPEMTPSLARMVM+++G L +P+KW+SIPQCWRYERMTRGRRREH+QWNMD+WG++G EAEAEL+AA+V FFE VG+TA DVG++VNSR V+ EVL +LG+P  + A TCVLVDKLEKVP++AI+GD+ ELGL+  ++++LL+++  K L A++  LG  SQA++EL +   L EA+   +W+++DASVVRGLAYYTGIVFE FDR+
Sbjct:   46 GGRVSGAVQDQNLLDKTTKQDSPQQKGRP----QLDTNPPKGTRDFYPQDMRLRTWLFDHWRAVAKSFGFSEYDAPVLESEALYVRKAGEEVTTQLYNFVDKGDRAVALRPEMTPSLARMVMAQKGGLPMPLKWYSIPQCWRYERMTRGRRREHFQWNMDVWGVAGPEAEAELMAAMVTFFENVGLTAEDVGIKVNSRLVIGEVLDSLGIPEEKFAVTCVLVDKLEKVPIEAIQGDLEELGLDRSVVEKLLDVLTNKSLDALKGTLGEDSQAVKELSQFMTLCEAYNIQNWILFDASVVRGLAYYTGIVFEAFDRR 357          
BLAST of mRNA_P-wetherbeei_contig5521.2.1 vs. uniprot
Match: A0A7S3QA02_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QA02_9STRA)

HSP 1 Score: 414 bits (1063), Expect = 3.580e-141
Identity = 192/283 (67.84%), Postives = 239/283 (84.45%), Query Frame = 1
Query:   91 KLDLAPPKGTRDMFPEDMRLRTWLFGQWRDVARRFGFEEYDAPVLESEALYVRKSGEEVTQQLYNFEDKGGRRVALRPEMTPSLARMVMSRRGALTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGISGVEAEAELLAAVVAFFEGVGITAADVGLRVNSRGVLTEVLTALGVPLSRHAATCVLVDKLEKVPLDAIRGDMAELGLEEPIIQRLLEIMAMKDLAAVEAALGTQSQALQELRKLFMLAEAHGFADWLVYDASVVRGLAYYTGIVFEGFDRQ 939
            KL+  PPKGTRD +PEDMR RTWLF QWR+VA+ +GF EYDAPVLE+E+LY RK+GEEVT+QLYNF DKG R VALRPEMTPSLARMVM+++G L LP KWFSIPQCWRYERMTRGRRREHYQWNMDIWG+ GVE EAELLAA+V FFE VG+T+ DVG++VNSR V+ EVL+ LG+P  + AATCVLVDKLEKVP+DAI+GD+ ELGL+  ++++LL+++  K + A+   LG +S+A+ +L +L  L +A+G  +W+++DASVVRGLAYYTGIVFE FDR+
Sbjct:  118 KLETNPPKGTRDFYPEDMRQRTWLFDQWREVAKTYGFSEYDAPVLEAESLYTRKAGEEVTEQLYNFVDKGDRNVALRPEMTPSLARMVMAKKGGLGLPFKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVEGVETEAELLAAMVDFFERVGLTSEDVGIKVNSRMVIGEVLSELGIPEDKFAATCVLVDKLEKVPIDAIQGDLEELGLDRSVVEKLLQVLTNKSIDAIAEVLGEESEAVLQLSQLLNLCKAYGIEEWIIFDASVVRGLAYYTGIVFEAFDRR 400          
BLAST of mRNA_P-wetherbeei_contig5521.2.1 vs. uniprot
Match: B8C1W7_THAPS (Histidine--tRNA ligase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1W7_THAPS)

HSP 1 Score: 416 bits (1068), Expect = 1.260e-140
Identity = 205/313 (65.50%), Postives = 246/313 (78.59%), Query Frame = 1
Query:   22 GGRVSAAV-------KQDAQRQAAKPAPAEKLDLAPPKGTRDMFPEDMRLRTWLFGQWRDVARRFGFEEYDAPVLESEALYVRKSGEEVTQQLYNFEDKGGRRVALRPEMTPSLARMVMSRRGALTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGISGVEAEAELLAAVVAFFEGVGITAADVGLRVNSRGVLTEVLTALGVPLSRHAATCVLVDKLEKVPLDAIRGDMAELGLEEPIIQRLLEIMAMKDLAAVEAALGTQSQALQELRKLFMLAEAHGFADWLVYDASVVRGLAYYTGIVFEGFDRQ 939
            GGRV+A+V       K           P   LD  PPKGTRD +P DMRLRTWLF QWR VA  +GF EYDAPVLESE+LY RK+GEEVTQQLYNF DKG R VALRPEMTPSLARMVM+++G L LP+KWFSIPQCWRYERMTRGRRREHYQWNMDIWG+ G+EAEAELL+A+V FF+ VG+T+ DVG++VNSRGV+ EVL  LGVP  + AATCVLVDKLEKVPLDAI+G++ ELGLE+  I++L  ++    + ++ A L   S A+++L +LF L EA+G ADW+++DASVVRGLAYYTGIVFE FDR+
Sbjct:   48 GGRVAASVTDKDLLSKTTTDNNTNSSPPKVALDTNPPKGTRDFYPPDMRLRTWLFSQWRIVASLYGFSEYDAPVLESESLYTRKAGEEVTQQLYNFVDKGDRNVALRPEMTPSLARMVMAKKGGLPLPLKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVDGIEAEAELLSAMVMFFKRVGLTSEDVGIKVNSRGVIGEVLKELGVPEEKFAATCVLVDKLEKVPLDAIQGELEELGLEKSTIEKLTSVLTNTSIESISAVLPPGSDAVKQLSQLFKLCEAYGIADWILFDASVVRGLAYYTGIVFEAFDRK 360          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5521.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z4P1_9STRA1.470e-15777.22Histidine--tRNA ligase n=1 Tax=Tribonema minus Tax... [more]
D7G621_ECTSI2.010e-15577.00Histidine--tRNA ligase n=1 Tax=Ectocarpus siliculo... [more]
L1K527_GUITC3.990e-15471.75Histidine--tRNA ligase n=2 Tax=Guillardia theta (s... [more]
W7U324_9STRA2.160e-14468.51Histidine--tRNA ligase n=2 Tax=Nannochloropsis gad... [more]
A0A7S2V328_9STRA2.330e-14471.63Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A6U3RP29_9STRA1.300e-14366.77Histidine--tRNA ligase n=2 Tax=Ditylum brightwelli... [more]
A0A6U3ZLG2_9STRA4.200e-14370.21Histidine--tRNA ligase n=1 Tax=Skeletonema marinoi... [more]
B7GDK8_PHATC1.870e-14164.24Histidine--tRNA ligase n=2 Tax=Phaeodactylum trico... [more]
A0A7S3QA02_9STRA3.580e-14167.84Hypothetical protein (Fragment) n=2 Tax=Chaetocero... [more]
B8C1W7_THAPS1.260e-14065.50Histidine--tRNA ligase n=1 Tax=Thalassiosira pseud... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5521contigP-wetherbeei_contig5521:1564..3579 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G621
PFAMsHGTP_anticodon,tRNA-synt_His
Model size939
Max annot lvl2759|Eukaryota
KEGG rclassRC00055,RC00523
KEGG koko:K01892,ko:K14442
KEGG ReactionR03655
KEGG Pathwayko00970,ko03018,map00970,map03018
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004812,GO:0004821,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006427,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009507,GO:0009536,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
Exons5
Evalue3.29e-156
EggNOG OGsCOG0124@1|root,KOG1936@2759|Eukaryota
EC3.6.4.13,6.1.1.21
DescriptionHistidyl-trna synthetase
Cds size939
COG categoryJ
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03019
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186823.4883425-CDS-P-wetherbeei_contig5521:1563..17211683186823.4883425-CDS-P-wetherbeei_contig5521:1563..1721Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5521 1564..1721 +
1683186823.50906-CDS-P-wetherbeei_contig5521:1865..21231683186823.50906-CDS-P-wetherbeei_contig5521:1865..2123Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5521 1866..2123 +
1683186823.5216718-CDS-P-wetherbeei_contig5521:2353..26291683186823.5216718-CDS-P-wetherbeei_contig5521:2353..2629Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5521 2354..2629 +
1683186823.532175-CDS-P-wetherbeei_contig5521:2968..30921683186823.532175-CDS-P-wetherbeei_contig5521:2968..3092Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5521 2969..3092 +
1683186823.5424192-CDS-P-wetherbeei_contig5521:3456..35791683186823.5424192-CDS-P-wetherbeei_contig5521:3456..3579Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5521 3457..3579 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5521.2.1prot_P-wetherbeei_contig5521.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5521 1564..3579 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5521.2.1

>prot_P-wetherbeei_contig5521.2.1 ID=prot_P-wetherbeei_contig5521.2.1|Name=mRNA_P-wetherbeei_contig5521.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=313bp
MVAEETAGGRVSAAVKQDAQRQAAKPAPAEKLDLAPPKGTRDMFPEDMRL
RTWLFGQWRDVARRFGFEEYDAPVLESEALYVRKSGEEVTQQLYNFEDKG
GRRVALRPEMTPSLARMVMSRRGALTLPVKWFSIPQCWRYERMTRGRRRE
HYQWNMDIWGISGVEAEAELLAAVVAFFEGVGITAADVGLRVNSRGVLTE
VLTALGVPLSRHAATCVLVDKLEKVPLDAIRGDMAELGLEEPIIQRLLEI
MAMKDLAAVEAALGTQSQALQELRKLFMLAEAHGFADWLVYDASVVRGLA
YYTGIVFEGFDRQ
back to top

mRNA from alignment at P-wetherbeei_contig5521:1564..3579+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5521.2.1 ID=mRNA_P-wetherbeei_contig5521.2.1|Name=mRNA_P-wetherbeei_contig5521.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2016bp|location=Sequence derived from alignment at P-wetherbeei_contig5521:1564..3579+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTGGCGGAGGAAACCGCTGGAGGGCGAGTGAGTGCTGCCGTGAAGCA AGACGCCCAGCGCCAGGCCGCGAAGCCCGCCCCGGCGGAGAAGCTGGACC TAGCACCACCGAAGGGAACCCGTGACATGTTTCCAGAGGACATGCGCCTG CGTACTTGGTAAGAGCATATTTGTTGTTGAAAGGGTCCCTCGCGAACCGT TGAAAGTTTTCTATTCAATAGATGAGAATACTCGCAACGTGGGGTTTGAG TCTTGCGTTCCTGCTTCCTTCTCTCGCTTGGGCAAACGCACAAACCAAAC AGGCTCTTCGGGCAATGGCGGGACGTCGCGCGGCGTTTCGGCTTCGAGGA GTACGACGCGCCGGTGCTGGAGAGCGAGGCGCTGTACGTCCGAAAGTCGG GTGAGGAAGTCACGCAGCAGCTCTACAACTTTGAGGACAAGGGCGGCCGG CGCGTGGCCTTGCGGCCCGAAATGACTCCGTCGCTGGCCCGCATGGTTAT GTCGCGCCGCGGGGCGCTGACACTGCCCGTCAAGTGGTTCAGCATCCCGC AGTGCTGGAGGTGAGCCCCGCATGATGACTGCGATGTCGGGCGGCTCGCT TCATTGCTTCAGAGGTTACTTTAGACGCCCAAGGCTCGTGCCGTGCGATG CATGTGAAGACATTGCATCAGAGTCTTCAGCCTTTCCATTTGTATGCCCT TTCTCCTTGAAAGCAAAAGCCGTTACTGTGGAAACACTGAAAAACAATAT CTCTCCGGACGGACGGCTGTGCTGGCCCGCGCGGGCACAGGTACGAGCGC ATGACCCGCGGGCGGCGGCGTGAGCACTACCAATGGAATATGGACATCTG GGGCATTTCCGGTGTCGAAGCCGAAGCCGAGCTGCTGGCGGCCGTGGTGG CGTTTTTCGAAGGGGTCGGCATCACGGCGGCGGACGTCGGGCTGCGGGTG AACTCGCGGGGCGTGCTGACGGAGGTGCTGACGGCGCTAGGCGTGCCGTT GAGCCGCCACGCTGCGACGTGTGTGCTGGTGGACAAGCTCGAGAAGGTGC CGCTCGACGCCATTAGGTGAGGGAAGGGTGAAAGGAAATTTGCCGTTCGG GACACTGTGTGTGTGTGTGAAGATCTATTCTTTCCCGGCTTTTGCGTAGA GGCGCGTTCGTTCTTTTGGTTTCTTTTTGAAGAGTTGGTAAGTATTTGAA GAAGAAGAGTTCTTGACAGCTTGAAAAGGGACCAACAGCTGAGCTCCTTA TAAAAAATAATACATATTTTTGTGAGGATTAACCGTGTGTTTTGCGACCT CCTGGCCATCTCTCCGTTTTGCTTTTCTCCATCTTCCCTTTCCTTTTGCT TAACCGCTGACCTCCCGCCCTCTTCGCACCTGGATCTGGCAAACCTCAAA ACCAGGGGGGACATGGCGGAGCTGGGCCTGGAGGAGCCCATCATCCAGCG GCTGCTGGAGATAATGGCCATGAAGGACCTCGCCGCCGTCGAGGCCGCCC TCGGCACGCAGTCCCAAGCCCTGCAGGAGGTGAGGATAAGGGGCTCGAGG TTGCTTTCGTTTGGCCTCCAATTGATCGGCTGTTTTCCTTTTAGTTGATC GAAAATGGCGATGTTCAAACCTGTCTTTTTCACAGTGGCAGGCAGAGCGC CTTCCGGAGCTTTCGGAATGGAGATTTCCTGCATTCTCAATGCACGTTGT GCGTACAGGAACCTGTGGAACAGAGAGTGCACCTCGTTTAAACGATTTTT TGTTGACAGGTTGCGGCGCCACCCCTCTCAGCCATCGTTCATGGTCACAG TTCCAAACAAATGTATCTCTGCTTCCTAAACCTACACGAGCTAATTATTC CGTTAGCCACGGTCGTCTTCTGTTTTCACTTTCCTGATTGCAGCTGCGCA AGCTGTTTATGTTGGCGGAGGCCCACGGCTTTGCCGATTGGCTGGTCTAC GACGCATCAGTGGTGCGGGGGCTCGCCTACTACACTGGAATTGTCTTTGA GGGTTTCGACAGGCAA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig5521:1564..3579+

>mRNA_P-wetherbeei_contig5521.2.1 ID=mRNA_P-wetherbeei_contig5521.2.1|Name=mRNA_P-wetherbeei_contig5521.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=939bp|location=Sequence derived from alignment at P-wetherbeei_contig5521:1564..3579+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTGGCGGAGGAAACCGCTGGAGGGCGAGTGAGTGCTGCCGTGAAGCA
AGACGCCCAGCGCCAGGCCGCGAAGCCCGCCCCGGCGGAGAAGCTGGACC
TAGCACCACCGAAGGGAACCCGTGACATGTTTCCAGAGGACATGCGCCTG
CGTACTTGGCTCTTCGGGCAATGGCGGGACGTCGCGCGGCGTTTCGGCTT
CGAGGAGTACGACGCGCCGGTGCTGGAGAGCGAGGCGCTGTACGTCCGAA
AGTCGGGTGAGGAAGTCACGCAGCAGCTCTACAACTTTGAGGACAAGGGC
GGCCGGCGCGTGGCCTTGCGGCCCGAAATGACTCCGTCGCTGGCCCGCAT
GGTTATGTCGCGCCGCGGGGCGCTGACACTGCCCGTCAAGTGGTTCAGCA
TCCCGCAGTGCTGGAGGTACGAGCGCATGACCCGCGGGCGGCGGCGTGAG
CACTACCAATGGAATATGGACATCTGGGGCATTTCCGGTGTCGAAGCCGA
AGCCGAGCTGCTGGCGGCCGTGGTGGCGTTTTTCGAAGGGGTCGGCATCA
CGGCGGCGGACGTCGGGCTGCGGGTGAACTCGCGGGGCGTGCTGACGGAG
GTGCTGACGGCGCTAGGCGTGCCGTTGAGCCGCCACGCTGCGACGTGTGT
GCTGGTGGACAAGCTCGAGAAGGTGCCGCTCGACGCCATTAGGGGGGACA
TGGCGGAGCTGGGCCTGGAGGAGCCCATCATCCAGCGGCTGCTGGAGATA
ATGGCCATGAAGGACCTCGCCGCCGTCGAGGCCGCCCTCGGCACGCAGTC
CCAAGCCCTGCAGGAGCTGCGCAAGCTGTTTATGTTGGCGGAGGCCCACG
GCTTTGCCGATTGGCTGGTCTACGACGCATCAGTGGTGCGGGGGCTCGCC
TACTACACTGGAATTGTCTTTGAGGGTTTCGACAGGCAA
back to top