mRNA_P-wetherbeei_contig55203.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig55203.1.1 vs. uniprot
Match: A0A848RUQ9_9MICO (Extracellular solute-binding protein n=1 Tax=Planctomonas sp. JC2975 TaxID=2729626 RepID=A0A848RUQ9_9MICO) HSP 1 Score: 62.0 bits (149), Expect = 1.850e-9 Identity = 30/73 (41.10%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 10 VAITNPAAGLVSPTNIERAGELSQLGTDSITAIVTGRADLAALDDYINQWKQGGGDTIRQEFEAAI-AAKAGS 225
+ + +P A L SPTN ++ LSQ TD+ + GR+ LA L ++ WK GGGD IR E++ A+ +K+GS
Sbjct: 477 IGVADPTANLFSPTNAQKGLTLSQAMTDATNNYIAGRSSLAQLKSAVSDWKSGGGDQIRSEYQKAMKGSKSGS 549
BLAST of mRNA_P-wetherbeei_contig55203.1.1 vs. uniprot
Match: UPI001AE2EB30 (extracellular solute-binding protein n=1 Tax=Kribbella aluminosa TaxID=416017 RepID=UPI001AE2EB30) HSP 1 Score: 60.8 bits (146), Expect = 4.720e-9 Identity = 29/67 (43.28%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 22 NPAAGLVSPTNIERAGELSQLGTDSITAIVTGRADLAALDDYINQWKQGGGDTIRQEFEAAIAAKAG 222
+P L S + +AG L+QL D + IVTGR L A+D++ +QW+ GGDTIR+E+E+A+ + G
Sbjct: 485 DPTRQLYSRAALTQAGTLNQLNEDYLADIVTGRKPLTAIDEWRDQWRSRGGDTIRKEYESALRSLPG 551
BLAST of mRNA_P-wetherbeei_contig55203.1.1 vs. uniprot
Match: UPI0004004962 (extracellular solute-binding protein n=1 Tax=Arthrobacter sp. 35W TaxID=1132441 RepID=UPI0004004962) HSP 1 Score: 60.5 bits (145), Expect = 6.440e-9 Identity = 29/66 (43.94%), Postives = 40/66 (60.61%), Query Frame = 1
Query: 16 ITNPAAGLVSPTNIERAGELSQLGTDSITAIVTGRADLAALDDYINQWKQGGGDTIRQEFEAAIAA 213
+ NP L SPT+ + +L Q +D+ TA + GR D+A L I WK GGDTIR E+E A+A+
Sbjct: 485 VANPCETLFSPTDSSQGSKLGQPVSDAATAFIAGRGDMAGLKAAIAAWKTSGGDTIRGEYEQALAS 550
BLAST of mRNA_P-wetherbeei_contig55203.1.1 vs. uniprot
Match: A0A7R7HY89_9ACTN (Sugar ABC transporter substrate-binding protein n=2 Tax=Actinocatenispora TaxID=390988 RepID=A0A7R7HY89_9ACTN) HSP 1 Score: 58.2 bits (139), Expect = 4.200e-8 Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 1
Query: 7 RVAITNPAAGLVSPTNIERAGELSQLGTDSITAIVTGRADLAALDDYINQWKQGGGDTIRQEFEAAIA 210
++A NP +G S TN + L+QL +D + +V GR ++AL + W+ GGGD IR EFE +IA
Sbjct: 475 KIAQPNPTSGHYSDTNTSKGPTLAQLYSDFVADVVQGRKPISALKQLRSDWRSGGGDKIRHEFEQSIA 542
BLAST of mRNA_P-wetherbeei_contig55203.1.1 vs. uniprot
Match: UPI0004006374 (extracellular solute-binding protein n=1 Tax=Actinospica robiniae TaxID=304901 RepID=UPI0004006374) HSP 1 Score: 58.2 bits (139), Expect = 4.210e-8 Identity = 28/71 (39.44%), Postives = 44/71 (61.97%), Query Frame = 1
Query: 10 VAITNPAAGLVSPTNIERAGELSQLGTDSITAIVTGRADLAALDDYINQWKQGGGDTIRQEFEAAIAAKAG 222
+A+ NP + L SPT ++ EL T +++ I++G+ +AL + W+ GGGDTIR E+E A+AA G
Sbjct: 496 MAVGNPCSNLNSPTFNKKGLELQTQFTATVSEIISGKQPFSALAGAVKTWRSGGGDTIRSEYEKALAASKG 566
BLAST of mRNA_P-wetherbeei_contig55203.1.1 vs. uniprot
Match: UPI00139178F9 (extracellular solute-binding protein n=1 Tax=Pseudactinotalea suaedae TaxID=1524924 RepID=UPI00139178F9) HSP 1 Score: 57.4 bits (137), Expect = 7.850e-8 Identity = 26/65 (40.00%), Postives = 37/65 (56.92%), Query Frame = 1
Query: 16 ITNPAAGLVSPTNIERAGELSQLGTDSITAIVTGRADLAALDDYINQWKQGGGDTIRQEFEAAIA 210
+ NP GL S T G L+ + D+ AI+ GR +++ D+ W+ GGGDTIR E+E A A
Sbjct: 480 VRNPTVGLYSTTQGTNGGRLTTMANDAANAILLGREPVSSWDEVATDWRSGGGDTIRAEYEEAYA 544
BLAST of mRNA_P-wetherbeei_contig55203.1.1 vs. uniprot
Match: UPI001B8196F6 (extracellular solute-binding protein n=1 Tax=Actinospica durhamensis TaxID=1508375 RepID=UPI001B8196F6) HSP 1 Score: 56.6 bits (135), Expect = 1.470e-7 Identity = 27/71 (38.03%), Postives = 42/71 (59.15%), Query Frame = 1
Query: 10 VAITNPAAGLVSPTNIERAGELSQLGTDSITAIVTGRADLAALDDYINQWKQGGGDTIRQEFEAAIAAKAG 222
+A+ NP + L SP E+ EL T ++ I+ G+ ++AL + W+ GGG+TIR +FE A+AA G
Sbjct: 497 MAVGNPCSNLNSPAFNEKGSELQTQFTATVNEIIAGKQPVSALAGAVKAWQSGGGNTIRSQFEQALAASKG 567
BLAST of mRNA_P-wetherbeei_contig55203.1.1 vs. uniprot
Match: A0A1B1ZH81_9PSEU (Uncharacterized protein n=1 Tax=Pseudonocardia sp. HH130630-07 TaxID=1690815 RepID=A0A1B1ZH81_9PSEU) HSP 1 Score: 54.3 bits (129), Expect = 9.580e-7 Identity = 27/68 (39.71%), Postives = 41/68 (60.29%), Query Frame = 1
Query: 13 AITNPAAGLVSPTNIERAGELSQLGTDSITAIVTGRADLAALDDYINQWKQGGGDTIRQEFEAAIAAK 216
A+TN +GL SPT + L + D+ I GR ++A D+ I W++GGGD +R E+E A+AA+
Sbjct: 472 AVTNATSGLYSPTKSIKGKSLYKALDDTRNQIFLGRLPVSAWDEAIADWRRGGGDQMRAEYEQALAAR 539
BLAST of mRNA_P-wetherbeei_contig55203.1.1 vs. uniprot
Match: A0A1Q5N4A8_9ACTN (Uncharacterized protein n=12 Tax=Streptomyces TaxID=1883 RepID=A0A1Q5N4A8_9ACTN) HSP 1 Score: 54.3 bits (129), Expect = 9.580e-7 Identity = 24/70 (34.29%), Postives = 42/70 (60.00%), Query Frame = 1
Query: 7 RVAITNPAAGLVSPTNIERAGELSQLGTDSITAIVTGRADLAALDDYINQWKQGGGDTIRQEFEAAIAAK 216
+++ TNP +G S T+ ++ L+ D I+ GR ++A + + +W+ GGGD +R EFEA++A K
Sbjct: 477 KISQTNPTSGHFSDTSTSKSPSLTTAMADCQKDIIAGRKPISAYKEQLREWRSGGGDKMRAEFEASLAGK 546
BLAST of mRNA_P-wetherbeei_contig55203.1.1 vs. uniprot
Match: A0A7W3JA95_9MICO (Putative aldouronate transport system substrate-binding protein n=3 Tax=Promicromonospora TaxID=43676 RepID=A0A7W3JA95_9MICO) HSP 1 Score: 53.9 bits (128), Expect = 1.310e-6 Identity = 26/70 (37.14%), Postives = 40/70 (57.14%), Query Frame = 1
Query: 13 AITNPAAGLVSPTNIERAGELSQLGTDSITAIVTGRADLAALDDYINQWKQGGGDTIRQEFEAAIAAKAG 222
A+ NP GL S T + G+L + + + I+ GR + A D + W +GGGDTIR E++ A+A + G
Sbjct: 474 AVANPVQGLFSDTASRKGGQLGEKLVSTESDIMAGRKPVTAWADAASAWAKGGGDTIRDEYQKALAERQG 543 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55203.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig55203.1.1 >prot_P-wetherbeei_contig55203.1.1 ID=prot_P-wetherbeei_contig55203.1.1|Name=mRNA_P-wetherbeei_contig55203.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=76bp MARVAITNPAAGLVSPTNIERAGELSQLGTDSITAIVTGRADLAALDDYIback to top mRNA from alignment at P-wetherbeei_contig55203:83..310+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig55203.1.1 ID=mRNA_P-wetherbeei_contig55203.1.1|Name=mRNA_P-wetherbeei_contig55203.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=228bp|location=Sequence derived from alignment at P-wetherbeei_contig55203:83..310+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig55203:83..310+ >mRNA_P-wetherbeei_contig55203.1.1 ID=mRNA_P-wetherbeei_contig55203.1.1|Name=mRNA_P-wetherbeei_contig55203.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=228bp|location=Sequence derived from alignment at P-wetherbeei_contig55203:83..310+ (Phaeothamnion wetherbeei SAG_119_79)back to top |