prot_P-wetherbeei_contig55170.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig55170.1.1
Unique Nameprot_P-wetherbeei_contig55170.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length78
Homology
BLAST of mRNA_P-wetherbeei_contig55170.1.1 vs. uniprot
Match: A0A4D9CYW2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYW2_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 5.730e-10
Identity = 36/73 (49.32%), Postives = 46/73 (63.01%), Query Frame = 0
Query:    1 VALPFDGVKTVMQTA----EGAAAGDSTLAAAARMLRDGGVAALYRGWPVALGRGIPGAALTLTTYDYVMRWL 69
            VALPFD VK+VMQ A    EG   G   +    R++R+GG+  L+RGW  A GR +PG+A TL T+D V  WL
Sbjct:  179 VALPFDTVKSVMQVAGVGREGRREGMGQVIE--RLVREGGLRRLFRGWQGAFGRAVPGSAATLATFDVVKDWL 249          
BLAST of mRNA_P-wetherbeei_contig55170.1.1 vs. uniprot
Match: A0A6H5L227_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L227_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 6.560e-9
Identity = 36/74 (48.65%), Postives = 47/74 (63.51%), Query Frame = 0
Query:    1 VALPFDGVKTVMQTA-----EGAAAGDSTLAAAARMLRDGGVAALYRGWPVALGRGIPGAALTLTTYDYVMRWL 69
            VALP D  KTV+Q A     E    G +TL+   R++R+GG+  LY GWPVA GRGIPGAA+ L T+ +  + L
Sbjct:  261 VALPLDMTKTVIQAAGRKRGEVVPGGVATLS---RLVREGGLRNLYMGWPVAFGRGIPGAAIMLATHTFASQKL 331          
BLAST of mRNA_P-wetherbeei_contig55170.1.1 vs. uniprot
Match: A0A662XR70_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XR70_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 5.440e-8
Identity = 28/70 (40.00%), Postives = 44/70 (62.86%), Query Frame = 0
Query:    1 VALPFDGVKTVMQTAEGAAAGDSTLAAAARMLRDGGVAALYRGWPVALGRGIPGAALTLTTYDYVMRWLD 70
            VALPFD VK+++Q           +++  R++++GGVA L+RGW  A  RG+P AA+T  ++D   + LD
Sbjct:  240 VALPFDTVKSLIQADGREGKYTGLISSTTRLVQEGGVAQLFRGWQAAFSRGVPSAAITFWSFDRASKLLD 309          
BLAST of mRNA_P-wetherbeei_contig55170.1.1 vs. uniprot
Match: A0A662X2E1_9STRA (MaoC-like domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X2E1_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 6.250e-8
Identity = 28/70 (40.00%), Postives = 43/70 (61.43%), Query Frame = 0
Query:    1 VALPFDGVKTVMQTAEGAAAGDSTLAAAARMLRDGGVAALYRGWPVALGRGIPGAALTLTTYDYVMRWLD 70
            VALPFD VK+++Q           +++  R++R+GGV  L+RGW  A  RG+P AA+T  ++D   + LD
Sbjct:  549 VALPFDTVKSLIQADGREGKYTGLISSTTRLVREGGVVQLFRGWQAAFSRGVPSAAITFWSFDRASKLLD 618          
BLAST of mRNA_P-wetherbeei_contig55170.1.1 vs. uniprot
Match: R1DZ96_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DZ96_EMIHU)

HSP 1 Score: 54.7 bits (130), Expect = 9.350e-8
Identity = 31/69 (44.93%), Postives = 43/69 (62.32%), Query Frame = 0
Query:    1 VALPFDGVKTVMQTAEGAAAGDSTLAAAARMLRDGGVAALYRGWPVALGRGIPGAALTLTTYDYVMRWL 69
            VALP D +K+ +Q+     +   +  AA   +   GVA+LYRGW VA GRGIPGAA+TLT +   + W+
Sbjct:   43 VALPLDCIKSRIQSQPLETSPRRSWLAALHSID--GVASLYRGWQVAFGRGIPGAAITLTVHHRALEWI 109          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55170.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A4D9CYW2_9STRA5.730e-1049.32Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A6H5L227_9PHAE6.560e-948.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A662XR70_9STRA5.440e-840.00Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A662X2E1_9STRA6.250e-840.00MaoC-like domain-containing protein n=1 Tax=Nothop... [more]
R1DZ96_EMIHU9.350e-844.93Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 2..69
e-value: 3.5E-12
score: 46.1
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 1..68
score: 13.052193
IPR023395Mitochondrial carrier domain superfamilyGENE3D1.50.40.10Mitochondrial carrier domaincoord: 1..76
e-value: 6.8E-15
score: 56.6
IPR023395Mitochondrial carrier domain superfamilySUPERFAMILY103506Mitochondrial carriercoord: 2..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig55170contigP-wetherbeei_contig55170:43..276 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig55170.1.1mRNA_P-wetherbeei_contig55170.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig55170 43..276 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig55170.1.1 ID=prot_P-wetherbeei_contig55170.1.1|Name=mRNA_P-wetherbeei_contig55170.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=78bp
VALPFDGVKTVMQTAEGAAAGDSTLAAAARMLRDGGVAALYRGWPVALGR
GIPGAALTLTTYDYVMRWLDGGGQGGM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018108Mitochondrial_sb/sol_carrier
IPR023395Mt_carrier_dom_sf