prot_P-wetherbeei_contig55087.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig55087.1.1
Unique Nameprot_P-wetherbeei_contig55087.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length54
Homology
BLAST of mRNA_P-wetherbeei_contig55087.1.1 vs. uniprot
Match: UPI001CE32360 (hypothetical protein n=1 Tax=Bradyrhizobium sp. WSM 1738 TaxID=2821405 RepID=UPI001CE32360)

HSP 1 Score: 56.6 bits (135), Expect = 4.540e-9
Identity = 29/45 (64.44%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    9 REMAKSYSGVIVREGGRSSIPETLMIEPRGRGVLDHPPSRVTTVE 53
            RE A ++S VIVREGGR SIPE +MI+P  RGVLD P +R  TVE
Sbjct:   14 RENADAHSPVIVREGGRFSIPEAIMIKPMSRGVLDPPHARGMTVE 58          
BLAST of mRNA_P-wetherbeei_contig55087.1.1 vs. uniprot
Match: UPI001AEC852B (hypothetical protein n=1 Tax=Bradyrhizobium sp. AT1 TaxID=574934 RepID=UPI001AEC852B)

HSP 1 Score: 55.8 bits (133), Expect = 4.950e-9
Identity = 32/53 (60.38%), Postives = 35/53 (66.04%), Query Frame = 0
Query:    3 NSGAMCREMAK----SYSGVIVREGGRSSIPETLMIEPRGRGVLDHPPSRVTT 51
            NSG   RE AK        VI REGGRSSIPET++IEP  RGVLD PP+R  T
Sbjct:    6 NSGESSREKAKVRVHHTLTVIAREGGRSSIPETIVIEPISRGVLDSPPARGMT 58          
BLAST of mRNA_P-wetherbeei_contig55087.1.1 vs. uniprot
Match: A0A1I3J1W1_9BRAD (Uncharacterized protein n=1 Tax=Bradyrhizobium sp. cf659 TaxID=1761771 RepID=A0A1I3J1W1_9BRAD)

HSP 1 Score: 55.1 bits (131), Expect = 1.750e-7
Identity = 30/50 (60.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    4 SGAMCREMAKSYS-GVIVREGGRSSIPETLMIEPRGRGVLDHPPSRVTTV 52
            S A  R     Y+  VI REGGRSSIPE +++EPRG GVLD PPSR  TV
Sbjct:  176 SAARLRRRVCDYTLAVIAREGGRSSIPEAVVMEPRGCGVLDSPPSRGMTV 225          
BLAST of mRNA_P-wetherbeei_contig55087.1.1 vs. uniprot
Match: A0A1C3WNK7_9BRAD (Uncharacterized protein (Fragment) n=1 Tax=Bradyrhizobium shewense TaxID=1761772 RepID=A0A1C3WNK7_9BRAD)

HSP 1 Score: 49.3 bits (116), Expect = 1.590e-5
Identity = 24/30 (80.00%), Postives = 25/30 (83.33%), Query Frame = 0
Query:   24 GRSSIPETLMIEPRGRGVLDHPPSRVTTVE 53
            GRSSIPE L+IE RGRGVLD PPSR  TVE
Sbjct:  140 GRSSIPEALVIESRGRGVLDSPPSRGMTVE 169          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55087.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
UPI001CE323604.540e-964.44hypothetical protein n=1 Tax=Bradyrhizobium sp. WS... [more]
UPI001AEC852B4.950e-960.38hypothetical protein n=1 Tax=Bradyrhizobium sp. AT... [more]
A0A1I3J1W1_9BRAD1.750e-760.00Uncharacterized protein n=1 Tax=Bradyrhizobium sp.... [more]
A0A1C3WNK7_9BRAD1.590e-580.00Uncharacterized protein (Fragment) n=1 Tax=Bradyrh... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig55087contigP-wetherbeei_contig55087:16..177 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig55087.1.1mRNA_P-wetherbeei_contig55087.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig55087 16..177 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig55087.1.1 ID=prot_P-wetherbeei_contig55087.1.1|Name=mRNA_P-wetherbeei_contig55087.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=54bp
MDNSGAMCREMAKSYSGVIVREGGRSSIPETLMIEPRGRGVLDHPPSRVT
TVEC
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