prot_P-wetherbeei_contig55026.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig55026.1.1
Unique Nameprot_P-wetherbeei_contig55026.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length175
Homology
BLAST of mRNA_P-wetherbeei_contig55026.1.1 vs. uniprot
Match: A0A844T7K4_9BRAD (Uncharacterized protein n=3 Tax=Bradyrhizobium TaxID=374 RepID=A0A844T7K4_9BRAD)

HSP 1 Score: 85.5 bits (210), Expect = 3.720e-16
Identity = 102/143 (71.33%), Postives = 104/143 (72.73%), Query Frame = 0
Query:    1 FSTTVNAGGEQNVYIDGSATGTTINTGGLQIDWGFXXXXXXXXXXXXXXXXXXXXXXXXXVQTVEAGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGTVVQTTIAXXXXXXXXXXXXXXXXXXXXXXXVYADGFATGT 143
            F TT+NAGGEQNVYIDGSATGTTIN GGLQIDWGF          XXXXXXXXXXXXXX VQTVE GGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGTV+QTTI                        VYADG ATGT
Sbjct:  879 FWTTLNAGGEQNVYIDGSATGTTINAGGLQIDWGFTIITTISGGNXXXXXXXXXXXXXXGVQTVETGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGTVIQTTIGNGAVQYLHGSASVTTVNAGSQQNVYADGVATGT 1021          
BLAST of mRNA_P-wetherbeei_contig55026.1.1 vs. uniprot
Match: A0A4R3TZ63_9BRAD (Autotransporter passenger strand-loop-strand repeat protein n=1 Tax=Bradyrhizobium sp. Y-H1 TaxID=2485167 RepID=A0A4R3TZ63_9BRAD)

HSP 1 Score: 74.7 bits (182), Expect = 2.060e-12
Identity = 102/142 (71.83%), Postives = 107/142 (75.35%), Query Frame = 0
Query:    1 FSTTVNAGGEQNVYIDGSATGTTINTGGLQIDWGFXXXXXXXXXXXXXXXXXXXXXXXXXVQTVEAGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGTVVQTTIAXXXXXXXXXXXXXXXXXXXXXXXVYADGFATG 142
            FST VN GGEQNVYIDGSATGTTIN GGLQIDWGF  XXXXXXXXXXXXXXXXXXXXXXXVQT+++GGT   XXXXXXXXXXXXXXXXXXXXXXXXXXXX G+ +QT I                        VYADGFATG
Sbjct:  955 FSTFVNDGGEQNVYIDGSATGTTINAGGLQIDWGFTIXXXXXXXXXXXXXXXXXXXXXXXVQTIQSGGTASDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSAIQTIIDNGAIQYLHGTASFTTVNAGSQQNVYADGFATG 1096          
BLAST of mRNA_P-wetherbeei_contig55026.1.1 vs. uniprot
Match: A0A5P6PAH1_9BRAD (Uncharacterized protein n=2 Tax=Bradyrhizobium TaxID=374 RepID=A0A5P6PAH1_9BRAD)

HSP 1 Score: 69.3 bits (168), Expect = 1.510e-10
Identity = 103/132 (78.03%), Postives = 104/132 (78.79%), Query Frame = 0
Query:   12 NVYIDGSATGTTINTGGLQIDWGFXXXXXXXXXXXXXXXXXXXXXXXXXVQTVEAGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGTVVQTTIAXXXXXXXXXXXXXXXXXXXXXXXVYADGFATGT 143
            NVYIDGSATGT+IN GGLQIDWGF        X                VQTVEAGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGTVVQTTIA XXXXXXXXXXXXXXXXXXXXXX  ADGFATGT
Sbjct:  890 NVYIDGSATGTSINAGGLQIDWGFTIITTINGXNQHVFGSASLTTINSGVQTVEAGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGTVVQTTIANXXXXXXXXXXXXXXXXXXXXXXXXADGFATGT 1021          
BLAST of mRNA_P-wetherbeei_contig55026.1.1 vs. uniprot
Match: UPI00076A980E (calcium-binding protein n=1 Tax=Bradyrhizobium sp. CCH5-F6 TaxID=1768753 RepID=UPI00076A980E)

HSP 1 Score: 56.2 bits (134), Expect = 4.990e-6
Identity = 92/128 (71.88%), Postives = 95/128 (74.22%), Query Frame = 0
Query:   12 NVYIDGSATGTTINTGGLQIDWGFXXXXXXXXXXXXXXXXXXXXXXXXXVQTVEAGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGTVVQTTIAXXXXXXXXXXXXXXXXXXXXXXXVYADGF 139
            NVYIDGSATGTTIN GGLQIDWGF  XXXXXXXXXXXXXXXXXXXXXXXVQTV++GGT   XXXXXXXXXXXXXXXXXXXXXXXXXXXX G+V QT I                        VYADGF
Sbjct: 1068 NVYIDGSATGTTINAGGLQIDWGFTIXXXXXXXXXXXXXXXXXXXXXXXVQTVQSGGTASEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSVTQTIIGNGAIQYLHGSASLTTVNAGSQQNVYADGF 1195          
BLAST of mRNA_P-wetherbeei_contig55026.1.1 vs. uniprot
Match: A0A850IG07_9BRAD (Uncharacterized protein n=1 Tax=Bradyrhizobium sp. 323S2 TaxID=1404649 RepID=A0A850IG07_9BRAD)

HSP 1 Score: 55.8 bits (133), Expect = 5.920e-6
Identity = 62/131 (47.33%), Postives = 67/131 (51.15%), Query Frame = 0
Query:   13 VYIDGSATGTTINTGGLQIDWGFXXXXXXXXXXXXXXXXXXXXXXXXXVQTVEAGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGTVVQTTIAXXXXXXXXXXXXXXXXXXXXXXXVYADGFATGT 143
            VYIDGSATG+TIN GG+QIDWGF          XXXXXXXXXXXXXXX+Q VE+GGT                                GTVVQTTI+             XXXX      VYADG ATGT
Sbjct:  262 VYIDGSATGSTINAGGIQIDWGFTIITTISGGGXXXXXXXXXXXXXXXLQAVESGGTASDTTIHG------------------------GTVVQTTISNGALQSLHGNASIXXXXAGSQQSVYADGTATGT 368          
BLAST of mRNA_P-wetherbeei_contig55026.1.1 vs. uniprot
Match: A0A176YEY8_9BRAD (Uncharacterized protein n=1 Tax=Bradyrhizobium centrolobii TaxID=1505087 RepID=A0A176YEY8_9BRAD)

HSP 1 Score: 55.8 bits (133), Expect = 6.690e-6
Identity = 25/32 (78.12%), Postives = 28/32 (87.50%), Query Frame = 0
Query:    3 TTVNAGGEQNVYIDGSATGTTINTGGLQIDWG 34
            T VN GGEQNVY DG+ATGTT+N GG+QIDWG
Sbjct:  881 TIVNDGGEQNVYADGAATGTTLNAGGMQIDWG 912          
BLAST of mRNA_P-wetherbeei_contig55026.1.1 vs. uniprot
Match: A0A1L3F844_BRAJP (Uncharacterized protein n=14 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A1L3F844_BRAJP)

HSP 1 Score: 55.1 bits (131), Expect = 1.230e-5
Identity = 24/32 (75.00%), Postives = 29/32 (90.62%), Query Frame = 0
Query:    3 TTVNAGGEQNVYIDGSATGTTINTGGLQIDWG 34
            TTVNAG +Q+VY DG+ATGTTIN GG+Q+DWG
Sbjct: 1003 TTVNAGSQQSVYADGTATGTTINAGGVQVDWG 1034          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55026.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A844T7K4_9BRAD3.720e-1671.33Uncharacterized protein n=3 Tax=Bradyrhizobium Tax... [more]
A0A4R3TZ63_9BRAD2.060e-1271.83Autotransporter passenger strand-loop-strand repea... [more]
A0A5P6PAH1_9BRAD1.510e-1078.03Uncharacterized protein n=2 Tax=Bradyrhizobium Tax... [more]
UPI00076A980E4.990e-671.88calcium-binding protein n=1 Tax=Bradyrhizobium sp.... [more]
A0A850IG07_9BRAD5.920e-647.33Uncharacterized protein n=1 Tax=Bradyrhizobium sp.... [more]
A0A176YEY8_9BRAD6.690e-678.13Uncharacterized protein n=1 Tax=Bradyrhizobium cen... [more]
A0A1L3F844_BRAJP1.230e-575.00Uncharacterized protein n=14 Tax=Bradyrhizobiaceae... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR030930Adhesin of bacterial autotransporter systemTIGRFAMTIGR04415TIGR04415coord: 120..151
e-value: 2.1E-10
score: 38.4
coord: 69..101
e-value: 3.2E-8
score: 31.5
coord: 36..68
e-value: 1.6E-7
score: 29.2
coord: 2..30
e-value: 9.3E-10
score: 36.4
IPR012332Autotransporter, pectate lyase C-like domain superfamilyGENE3D2.160.20.20coord: 1..96
e-value: 5.3E-24
score: 86.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig55026contigP-wetherbeei_contig55026:2..526 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig55026.1.1mRNA_P-wetherbeei_contig55026.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig55026 2..526 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig55026.1.1 ID=prot_P-wetherbeei_contig55026.1.1|Name=mRNA_P-wetherbeei_contig55026.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=175bp
FSTTVNAGGEQNVYIDGSATGTTINTGGLQIDWGFTITTTINGGNQHVFG
SASLTTINSGVQTVEAGGTASDTTIHGGAQDVYSGATAIKTTMDGGSQNV
YGTVVQTTIANGAVQYLHGSASATTVNAGSQQNVYADGFATGTTINAGGF
QLDWGSASATIVNGGAQYVYGSAAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR030930AIDA
IPR012332Autotransporter_pectin_lyase_C