mRNA_P-wetherbeei_contig54997.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54997.1.1 vs. uniprot
Match: A0A7W0QR16_9CHLR (Sugar ABC transporter permease n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0QR16_9CHLR) HSP 1 Score: 236 bits (603), Expect = 1.470e-75 Identity = 116/144 (80.56%), Postives = 131/144 (90.97%), Query Frame = 1
Query: 4 NFAWTADPNTALGAVIAIDVWKTTPFMALLLLAGLQVIPSDVYEAAYVDGASKWQQFWQITLPLLRPALLVALIFRTMDSFRVFDLIFVLKGAATETMTVAVYTQQQLIQANRLGFGSAAAVFIFLCIGLMVLGYSRLITVEES 435
NF+W + T + +VIAIDVWKTTPFMALLLLAGLQ+IP DVYEAAYVDGASKWQQFWQ+TLPL++PALLVALIFRTMDSFRVFDLI+VLK +TET+TVA+YTQQ L+QANRLG GSAAAV +FLCIGLMV GYSRLITVEE+
Sbjct: 182 NFSWITNKATVMASVIAIDVWKTTPFMALLLLAGLQIIPGDVYEAAYVDGASKWQQFWQMTLPLIKPALLVALIFRTMDSFRVFDLIYVLKQGSTETITVAIYTQQLLLQANRLGAGSAAAVVVFLCIGLMVFGYSRLITVEEN 325
BLAST of mRNA_P-wetherbeei_contig54997.1.1 vs. uniprot
Match: A0A838GCN4_9CHLR (Sugar ABC transporter permease n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A838GCN4_9CHLR) HSP 1 Score: 234 bits (597), Expect = 1.120e-74 Identity = 115/144 (79.86%), Postives = 132/144 (91.67%), Query Frame = 1
Query: 4 NFAWTADPNTALGAVIAIDVWKTTPFMALLLLAGLQVIPSDVYEAAYVDGASKWQQFWQITLPLLRPALLVALIFRTMDSFRVFDLIFVLKGAATETMTVAVYTQQQLIQANRLGFGSAAAVFIFLCIGLMVLGYSRLITVEES 435
NF+W + TA+ AV+AIDVWKTTPFMALL+LAGLQ+IP DVYEAAYVDGASKWQQFWQ+TLPL++PALLVALIFRTMDSFRVFDLI+VLK +T+TMTVA+YT Q LIQ++RLG GSAAAVFIF+CIGLMV GYSRLITVEE+
Sbjct: 180 NFSWITNRGTAMIAVVAIDVWKTTPFMALLILAGLQIIPGDVYEAAYVDGASKWQQFWQMTLPLVKPALLVALIFRTMDSFRVFDLIYVLKQGSTDTMTVAIYTYQLLIQSSRLGAGSAAAVFIFVCIGLMVFGYSRLITVEEN 323
BLAST of mRNA_P-wetherbeei_contig54997.1.1 vs. uniprot
Match: A0A7W0A5N3_9CHLR (Sugar ABC transporter permease n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0A5N3_9CHLR) HSP 1 Score: 212 bits (539), Expect = 6.810e-66 Identity = 108/145 (74.48%), Postives = 125/145 (86.21%), Query Frame = 1
Query: 1 TNFAWTADPNTALGAVIAIDVWKTTPFMALLLLAGLQVIPSDVYEAAYVDGASKWQQFWQITLPLLRPALLVALIFRTMDSFRVFDLIFVLKGAATETMTVAVYTQQQLIQANRLGFGSAAAVFIFLCIGLMVLGYSRLITVEES 435
T AW A+P+TALGAVIA+DVWKTTPFMALLLLAGLQVIP+DVYEAAYVDGASK QQF+ ITLPLL+PALLVALIFRT+D+FRVFD+IFVL G A +TM++A+YTQQQLI + R+G GSA AV IFL IG + Y+RLI VEE
Sbjct: 180 TFLAWAANPSTALGAVIAVDVWKTTPFMALLLLAGLQVIPTDVYEAAYVDGASKIQQFFHITLPLLKPALLVALIFRTLDAFRVFDMIFVLNGYALDTMSIAIYTQQQLIASQRIGEGSAPAVLIFLTIGTLAFIYTRLIKVEEG 324
BLAST of mRNA_P-wetherbeei_contig54997.1.1 vs. uniprot
Match: A0A7V9HGV1_9CHLR (Sugar ABC transporter permease n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9HGV1_9CHLR) HSP 1 Score: 209 bits (532), Expect = 5.650e-65 Identity = 103/142 (72.54%), Postives = 122/142 (85.92%), Query Frame = 1
Query: 10 AWTADPNTALGAVIAIDVWKTTPFMALLLLAGLQVIPSDVYEAAYVDGASKWQQFWQITLPLLRPALLVALIFRTMDSFRVFDLIFVLKGAATETMTVAVYTQQQLIQANRLGFGSAAAVFIFLCIGLMVLGYSRLITVEES 435
AW A+ TAL A+IA+DVWKTTPFMALLLLAGLQVIP DVYEAA VDGAS WQQFWQITLPLLRPALLVALIFRT+D+FRVFD++FV+KG A +T+T+A+Y +Q +I LG G+AA+V IFL IGLMV+GY+RL+ VEE
Sbjct: 172 AWIANATTALPAIIAVDVWKTTPFMALLLLAGLQVIPGDVYEAAKVDGASPWQQFWQITLPLLRPALLVALIFRTLDAFRVFDVVFVMKGTALDTITLAIYARQTMIDEQWLGRGAAASVVIFLAIGLMVIGYTRLVRVEEE 313
BLAST of mRNA_P-wetherbeei_contig54997.1.1 vs. uniprot
Match: A0A7W0V589_9CHLR (Sugar ABC transporter permease n=2 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0V589_9CHLR) HSP 1 Score: 207 bits (527), Expect = 1.590e-64 Identity = 100/145 (68.97%), Postives = 124/145 (85.52%), Query Frame = 1
Query: 1 TNFAWTADPNTALGAVIAIDVWKTTPFMALLLLAGLQVIPSDVYEAAYVDGASKWQQFWQITLPLLRPALLVALIFRTMDSFRVFDLIFVLKGAATETMTVAVYTQQQLIQANRLGFGSAAAVFIFLCIGLMVLGYSRLITVEES 435
T AW A+ T+L ++IA+DVWKTTPFMALLLLAGLQ+IP DVYEAA VDGASKWQQFWQITLPLL+PALLVALIFRT+D+FRVFD++FV+KGAA +T+T+A+Y +Q +I LG G+AA+V IF CI L+V+ YSRL+ VEE+
Sbjct: 145 TPVAWIANATTSLPSIIAVDVWKTTPFMALLLLAGLQIIPGDVYEAATVDGASKWQQFWQITLPLLKPALLVALIFRTLDAFRVFDVVFVMKGAALDTITLAIYARQTMIDEQYLGRGAAASVVIFFCIALLVIVYSRLVRVEET 289
BLAST of mRNA_P-wetherbeei_contig54997.1.1 vs. uniprot
Match: A0A7W0TU70_9CHLR (Sugar ABC transporter permease n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0TU70_9CHLR) HSP 1 Score: 205 bits (522), Expect = 7.160e-64 Identity = 100/142 (70.42%), Postives = 125/142 (88.03%), Query Frame = 1
Query: 10 AWTADPNTALGAVIAIDVWKTTPFMALLLLAGLQVIPSDVYEAAYVDGASKWQQFWQITLPLLRPALLVALIFRTMDSFRVFDLIFVLKGAATETMTVAVYTQQQLIQANRLGFGSAAAVFIFLCIGLMVLGYSRLITVEES 435
AW A+P TAL A+IA+DVWKTTPFMALLLLAGLQ+IP DVYEA+ VDGASKWQQFWQITLPL++PALLVALIFRT+D+FRVFD+I+V+KG ATET+++AV +++LI ++LG GSA AV IFLCI ++V+ Y+RL+ VEE
Sbjct: 140 AWLANPTTALPAIIAVDVWKTTPFMALLLLAGLQLIPGDVYEASTVDGASKWQQFWQITLPLIKPALLVALIFRTLDAFRVFDVIYVMKGEATETISLAVLARRELIGNSKLGEGSAIAVIIFLCIAVLVVIYTRLVRVEEQ 281
BLAST of mRNA_P-wetherbeei_contig54997.1.1 vs. uniprot
Match: A0A7W1B3S3_9ACTN (Sugar ABC transporter permease n=1 Tax=Propionibacteriaceae bacterium TaxID=2021380 RepID=A0A7W1B3S3_9ACTN) HSP 1 Score: 205 bits (522), Expect = 3.240e-63 Identity = 96/143 (67.13%), Postives = 124/143 (86.71%), Query Frame = 1
Query: 4 NFAWTADPNTALGAVIAIDVWKTTPFMALLLLAGLQVIPSDVYEAAYVDGASKWQQFWQITLPLLRPALLVALIFRTMDSFRVFDLIFVLKGAATETMTVAVYTQQQLIQANRLGFGSAAAVFIFLCIGLMVLGYSRLITVEE 432
N A+ A P+TAL A++A+DVWKTTPFMALLLLAGLQ+IP+D+YEA+ VDGASKWQQFWQ+TLP+LRPALLVALIFRT+D+FRVFD++FV+KG + +T+T+A+Y + L+ +RLG SA +VFIF CIGL+V Y+RL+ VEE
Sbjct: 190 NIAFIARPSTALPAIVAVDVWKTTPFMALLLLAGLQIIPTDIYEASTVDGASKWQQFWQMTLPMLRPALLVALIFRTLDAFRVFDVVFVMKGVSVDTITLAIYARNALVDGDRLGRTSAVSVFIFACIGLLVFVYTRLVRVEE 332
BLAST of mRNA_P-wetherbeei_contig54997.1.1 vs. uniprot
Match: A0A7W1DX43_9CHLR (Sugar ABC transporter permease n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W1DX43_9CHLR) HSP 1 Score: 204 bits (519), Expect = 9.450e-63 Identity = 98/145 (67.59%), Postives = 127/145 (87.59%), Query Frame = 1
Query: 4 NFAWTADPNTALGAVIAIDVWKTTPFMALLLLAGLQVIPSDVYEAAYVDGASKWQQFWQITLPLLRPALLVALIFRTMDSFRVFDLIFVLKGAATETMTVAVYTQQQLIQAN-RLGFGSAAAVFIFLCIGLMVLGYSRLITVEES 435
+ A+TA P+ AL AV+A+DVWKTTPFMALLLLAGLQ+IP D+YEA+ VDGASKWQQFWQ+TLP+LRPALLVALIFRT+D+FRVFD+++V+KGAA ++MT+A+Y ++ LIQ RLG SAA+V IFLCIG++V Y+R++ VEE+
Sbjct: 190 SIAFTARPDMALAAVVAVDVWKTTPFMALLLLAGLQIIPGDIYEASRVDGASKWQQFWQMTLPMLRPALLVALIFRTLDAFRVFDVVYVMKGAAVQSMTLAIYARETLIQGQGRLGRASAASVIIFLCIGVLVFIYTRMVKVEEA 334
BLAST of mRNA_P-wetherbeei_contig54997.1.1 vs. uniprot
Match: A0A7V8VXM7_9CHLR (Sugar ABC transporter permease n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V8VXM7_9CHLR) HSP 1 Score: 193 bits (491), Expect = 2.190e-61 Identity = 97/119 (81.51%), Postives = 107/119 (89.92%), Query Frame = 1
Query: 79 FMALLLLAGLQVIPSDVYEAAYVDGASKWQQFWQITLPLLRPALLVALIFRTMDSFRVFDLIFVLKGAATETMTVAVYTQQQLIQANRLGFGSAAAVFIFLCIGLMVLGYSRLITVEES 435
FMALLLLAGLQ+IPSDVYEAAYVDGASKWQQFWQITLPL+RPALLVALIFRTMDSFRVFDLI+VLKG +T+T+A+YTQQ LIQ RLG GSA AV IF+CI +MV GYSRLI VEE+
Sbjct: 1 FMALLLLAGLQIIPSDVYEAAYVDGASKWQQFWQITLPLVRPALLVALIFRTMDSFRVFDLIYVLKGFFNDTLTIAIYTQQTLIQNQRLGLGSAGAVLIFICIAMMVAGYSRLIQVEEN 119
BLAST of mRNA_P-wetherbeei_contig54997.1.1 vs. uniprot
Match: A0A6J4USK1_9CHLR (Maltodextrin ABC transporter, permease protein MdxF n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4USK1_9CHLR) HSP 1 Score: 199 bits (505), Expect = 1.360e-60 Identity = 96/138 (69.57%), Postives = 117/138 (84.78%), Query Frame = 1
Query: 22 DPNTALGAVIAIDVWKTTPFMALLLLAGLQVIPSDVYEAAYVDGASKWQQFWQITLPLLRPALLVALIFRTMDSFRVFDLIFVLKGAATETMTVAVYTQQQLIQANRLGFGSAAAVFIFLCIGLMVLGYSRLITVEES 435
DP +L ++IA+DVWKTTPFMALLLLAGLQ IP DVYEA+ +DGA+KWQQFWQITLPL+RPALLVALIFRTMDSFRVFD+++V+K + +T T+A+Y QQ LI +RLG SA AV IFLCI LMV+ Y+RL+ VEE+
Sbjct: 200 DPTLSLFSIIAVDVWKTTPFMALLLLAGLQTIPGDVYEASNIDGATKWQQFWQITLPLVRPALLVALIFRTMDSFRVFDVVYVMKQGSLDTQTLAIYAQQALINGDRLGRTSAVAVVIFLCIALMVVAYTRLVRVEEN 337 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54997.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54997.1.1 >prot_P-wetherbeei_contig54997.1.1 ID=prot_P-wetherbeei_contig54997.1.1|Name=mRNA_P-wetherbeei_contig54997.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=146bp TNFAWTADPNTALGAVIAIDVWKTTPFMALLLLAGLQVIPSDVYEAAYVDback to top mRNA from alignment at P-wetherbeei_contig54997:18..455+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54997.1.1 ID=mRNA_P-wetherbeei_contig54997.1.1|Name=mRNA_P-wetherbeei_contig54997.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=438bp|location=Sequence derived from alignment at P-wetherbeei_contig54997:18..455+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54997:18..455+ >mRNA_P-wetherbeei_contig54997.1.1 ID=mRNA_P-wetherbeei_contig54997.1.1|Name=mRNA_P-wetherbeei_contig54997.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=438bp|location=Sequence derived from alignment at P-wetherbeei_contig54997:18..455+ (Phaeothamnion wetherbeei SAG_119_79)back to top |