mRNA_P-wetherbeei_contig54816.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig54816.1.1
Unique NamemRNA_P-wetherbeei_contig54816.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig54816.1.1 vs. uniprot
Match: A0A847ZQT6_9HYPH (Probable membrane transporter protein n=1 Tax=Phyllobacteriaceae bacterium TaxID=1871068 RepID=A0A847ZQT6_9HYPH)

HSP 1 Score: 185 bits (470), Expect = 1.270e-56
Identity = 90/124 (72.58%), Postives = 104/124 (83.87%), Query Frame = 1
Query:    4 KPADVPRGIFWGAITGFTSFVSHSGAPPYQMYVLPQRLEKMVYAGTTTIIFAIINLLKLPPYWFLGQVNLASLETALLLSPLAIIGAYMGYRLTLILPEKIFFRIVEVALFLVSLKLVYDGVAG 375
            KPADVPRG+FWG ITGFTSFV+H+G  P+QMYVLPQR+EKMVYAGT TI F IIN LKLPPY+ LGQ+NL SLE  L L+P+A  GA+ G+RLT ILPEK FFR VEVALFLVSLKL++D + G
Sbjct:  126 KPADVPRGLFWGTITGFTSFVAHAGGTPFQMYVLPQRMEKMVYAGTATITFTIINALKLPPYFMLGQINLQSLERCLYLAPVAFFGAWAGFRLTKILPEKTFFRWVEVALFLVSLKLIWDALRG 249          
BLAST of mRNA_P-wetherbeei_contig54816.1.1 vs. uniprot
Match: A0A858X5H5_9HYPH (Probable membrane transporter protein n=2 Tax=Starkeya sp. ORNL1 TaxID=2709380 RepID=A0A858X5H5_9HYPH)

HSP 1 Score: 181 bits (459), Expect = 3.870e-55
Identity = 85/125 (68.00%), Postives = 106/125 (84.80%), Query Frame = 1
Query:    4 KPADVPRGIFWGAITGFTSFVSHSGAPPYQMYVLPQRLEKMVYAGTTTIIFAIINLLKLPPYWFLGQVNLASLETALLLSPLAIIGAYMGYRLTLILPEKIFFRIVEVALFLVSLKLVYDGVAGL 378
            KPADVPRG+FWGA++GFTSFVSH+GAPPYQMYV+PQRL KMVYAGT+TI+FA IN++KLPPYW LGQ+ + +L  A +L P+AI G ++G  LT  +PE IF+R+V  ALFL+SLKLV+DGV GL
Sbjct:  113 KPADVPRGVFWGALSGFTSFVSHAGAPPYQMYVVPQRLPKMVYAGTSTILFAAINVMKLPPYWALGQLGIGNLRIAAMLLPIAIAGTFLGVWLTRRIPELIFYRVVVAALFLLSLKLVFDGVTGL 237          
BLAST of mRNA_P-wetherbeei_contig54816.1.1 vs. uniprot
Match: A0A2W2AKA7_9HYPH (Probable membrane transporter protein n=2 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2AKA7_9HYPH)

HSP 1 Score: 180 bits (456), Expect = 1.360e-54
Identity = 84/123 (68.29%), Postives = 106/123 (86.18%), Query Frame = 1
Query:    1 PKPADVPRGIFWGAITGFTSFVSHSGAPPYQMYVLPQRLEKMVYAGTTTIIFAIINLLKLPPYWFLGQVNLASLETALLLSPLAIIGAYMGYRLTLILPEKIFFRIVEVALFLVSLKLVYDGV 369
            P  ADVPRG+FWG +TGFTSFVSH+G PP+Q YVLPQ+L KMV+AGT+TI FAIIN++KL PYW LGQ N ++LE A LLSP+A++GA +GY+ T +LPEK+FFR+VEVALFL+SLKL+YD +
Sbjct:  123 PHRADVPRGLFWGTLTGFTSFVSHTGGPPFQTYVLPQKLPKMVFAGTSTIAFAIINVVKLVPYWALGQFNPSNLEVAALLSPVAVVGAVVGYKGTRLLPEKLFFRLVEVALFLISLKLIYDAL 245          
BLAST of mRNA_P-wetherbeei_contig54816.1.1 vs. uniprot
Match: A0A840SWQ5_9RHOB (Probable membrane transporter protein n=1 Tax=Amaricoccus macauensis TaxID=57001 RepID=A0A840SWQ5_9RHOB)

HSP 1 Score: 177 bits (450), Expect = 1.310e-53
Identity = 80/124 (64.52%), Postives = 106/124 (85.48%), Query Frame = 1
Query:    1 PKPADVPRGIFWGAITGFTSFVSHSGAPPYQMYVLPQRLEKMVYAGTTTIIFAIINLLKLPPYWFLGQVNLASLETALLLSPLAIIGAYMGYRLTLILPEKIFFRIVEVALFLVSLKLVYDGVA 372
            PKPAD PRG+ WG + GF+SFV+HSGA P+Q+YVLPQRLEKMV+AGT+TI+FA+IN  K+PPYW LGQ+NL ++E+A +L P+A++GA  G  +T +LPEK+FF IV +ALFL+SLKLV+DG+A
Sbjct:  126 PKPADWPRGLAWGTLAGFSSFVAHSGAAPFQVYVLPQRLEKMVFAGTSTILFAVINFAKIPPYWALGQMNLGTVESAAILMPIAMVGAVSGMYMTRLLPEKVFFEIVRIALFLISLKLVWDGIA 249          
BLAST of mRNA_P-wetherbeei_contig54816.1.1 vs. uniprot
Match: UPI001FF0339A (sulfite exporter TauE/SafE family protein n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=UPI001FF0339A)

HSP 1 Score: 174 bits (442), Expect = 2.010e-52
Identity = 84/122 (68.85%), Postives = 101/122 (82.79%), Query Frame = 1
Query:    4 KPADVPRGIFWGAITGFTSFVSHSGAPPYQMYVLPQRLEKMVYAGTTTIIFAIINLLKLPPYWFLGQVNLASLETALLLSPLAIIGAYMGYRLTLILPEKIFFRIVEVALFLVSLKLVYDGV 369
            KPADVPRG+FWG I GFTSFVSH+G PPY M+VLPQRL KM YAGTTTIIFAIINLLKLPPYW L QVN++SL   + L+P+++ GA+ GY+LT ILPEKIFFR VE+AL +V++ L  + V
Sbjct:  121 KPADVPRGLFWGTIAGFTSFVSHAGGPPYNMFVLPQRLSKMTYAGTTTIIFAIINLLKLPPYWVLDQVNVSSLWICVYLAPMSLFGAWAGYKLTGILPEKIFFRTVELALIVVAILLFKEAV 242          
BLAST of mRNA_P-wetherbeei_contig54816.1.1 vs. uniprot
Match: UPI001BCF11D9 (sulfite exporter TauE/SafE family protein n=1 Tax=Ancylobacter sp. VKM B-3255 TaxID=2836179 RepID=UPI001BCF11D9)

HSP 1 Score: 174 bits (442), Expect = 2.070e-52
Identity = 82/122 (67.21%), Postives = 103/122 (84.43%), Query Frame = 1
Query:    1 PKPADVPRGIFWGAITGFTSFVSHSGAPPYQMYVLPQRLEKMVYAGTTTIIFAIINLLKLPPYWFLGQVNLASLETALLLSPLAIIGAYMGYRLTLILPEKIFFRIVEVALFLVSLKLVYDG 366
            P+PADVPRG+FWGA++GFTSFV+H GAPPYQMYVLPQRL KMVYAGTTTI FA IN +KLPPYW LGQ++ A+L+ A LL P AII  ++G  +T  LPE +F+R++ +ALFL+SLKL++DG
Sbjct:  124 PRPADVPRGVFWGAVSGFTSFVTHGGAPPYQMYVLPQRLPKMVYAGTTTIAFAAINAMKLPPYWALGQLSPANLKIAALLLPAAIIATFVGVWVTRRLPEALFYRLIVIALFLLSLKLLWDG 245          
BLAST of mRNA_P-wetherbeei_contig54816.1.1 vs. uniprot
Match: UPI001BD052DE (sulfite exporter TauE/SafE family protein n=1 Tax=Ancylobacter lacus TaxID=2579970 RepID=UPI001BD052DE)

HSP 1 Score: 174 bits (440), Expect = 3.910e-52
Identity = 76/125 (60.80%), Postives = 108/125 (86.40%), Query Frame = 1
Query:    4 KPADVPRGIFWGAITGFTSFVSHSGAPPYQMYVLPQRLEKMVYAGTTTIIFAIINLLKLPPYWFLGQVNLASLETALLLSPLAIIGAYMGYRLTLILPEKIFFRIVEVALFLVSLKLVYDGVAGL 378
            +PAD+PRG+FWGA+TGFTSFV+H+GAPPYQMYV+PQRL KMVYAGT+T++FA IN +K+PPYW LGQ+   +L+TA LL P+A+   ++G R+T ++PEK+F+R V +ALF++S+K+V+DG++ L
Sbjct:  125 RPADLPRGLFWGAVTGFTSFVTHAGAPPYQMYVVPQRLPKMVYAGTSTLLFAAINWMKVPPYWALGQLGAGNLKTAALLLPVAVAATFLGVRVTRVIPEKLFYRAVMLALFVLSVKIVWDGLSAL 249          
BLAST of mRNA_P-wetherbeei_contig54816.1.1 vs. uniprot
Match: A0A2C9D283_9HYPH (Probable membrane transporter protein n=1 Tax=Hartmannibacter diazotrophicus TaxID=1482074 RepID=A0A2C9D283_9HYPH)

HSP 1 Score: 172 bits (435), Expect = 2.170e-51
Identity = 82/125 (65.60%), Postives = 102/125 (81.60%), Query Frame = 1
Query:    1 PKPADVPRGIFWGAITGFTSFVSHSGAPPYQMYVLPQRLEKMVYAGTTTIIFAIINLLKLPPYWFLGQVNLASLETALLLSPLAIIGAYMGYRLTLILPEKIFFRIVEVALFLVSLKLVYDGVAG 375
            P+PAD+PRG FWG I GFTSF+SHSG PPYQMYVLPQ+L KMV+AGT+TI+FAIIN  KL PY  LG+ +  ++E A LL P+A+I  Y GYRLT ILPE++FFRI+  ALFL+SL+L+Y G+AG
Sbjct:  125 PRPADIPRGAFWGTIAGFTSFISHSGGPPYQMYVLPQKLPKMVFAGTSTILFAIINWAKLLPYCALGEFSSDNMEVAALLVPVALISTYAGYRLTRILPEELFFRIILGALFLISLELIYKGLAG 249          
BLAST of mRNA_P-wetherbeei_contig54816.1.1 vs. uniprot
Match: UPI001BD516B2 (sulfite exporter TauE/SafE family protein n=4 Tax=Ancylobacter TaxID=99 RepID=UPI001BD516B2)

HSP 1 Score: 172 bits (436), Expect = 2.220e-51
Identity = 80/123 (65.04%), Postives = 103/123 (83.74%), Query Frame = 1
Query:    1 PKPADVPRGIFWGAITGFTSFVSHSGAPPYQMYVLPQRLEKMVYAGTTTIIFAIINLLKLPPYWFLGQVNLASLETALLLSPLAIIGAYMGYRLTLILPEKIFFRIVEVALFLVSLKLVYDGV 369
            P+PADVPRG+FWG +TGFTSFV+H+GAPPYQ Y+LPQRL KMV+AGT+T++FA +N +KL PYW LGQ++L++L   L L+P+A+ G   G +LT ILPEK+FFR+V  ALFL+SLKLV DGV
Sbjct:  125 PRPADVPRGLFWGTLTGFTSFVTHAGAPPYQTYILPQRLPKMVFAGTSTLLFAALNAMKLVPYWALGQLSLSNLAVTLALTPVAVAGTLAGVKLTRILPEKLFFRLVIGALFLLSLKLVMDGV 247          
BLAST of mRNA_P-wetherbeei_contig54816.1.1 vs. uniprot
Match: A0A0P6WC21_9HYPH (Probable membrane transporter protein n=3 Tax=Prosthecomicrobium hirschii TaxID=665126 RepID=A0A0P6WC21_9HYPH)

HSP 1 Score: 172 bits (435), Expect = 2.230e-51
Identity = 81/127 (63.78%), Postives = 100/127 (78.74%), Query Frame = 1
Query:    4 KPADVPRGIFWGAITGFTSFVSHSGAPPYQMYVLPQRLEKMVYAGTTTIIFAIINLLKLPPYWFLGQVNLASLETALLLSPLAIIGAYMGYRLTLILPEKIFFRIVEVALFLVSLKLVYDGVAGLTN 384
            K AD+PRGIFWG +TGFTSFVSH+G+PPYQ YVLPQRL+K VYAGTTTI+FA+INL KL P+W LGQ+NL SLETAL L+P A+I  + G R+  ++PE  FFR+VE  L  +SLKL++DG   L  
Sbjct:  124 KQADIPRGIFWGMLTGFTSFVSHAGSPPYQWYVLPQRLDKYVYAGTTTILFAVINLTKLVPFWMLGQLNLGSLETALTLAPAAVIATFAGARVVKMIPEGAFFRLVEFGLCAISLKLIWDGAHALAG 250          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54816.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A847ZQT6_9HYPH1.270e-5672.58Probable membrane transporter protein n=1 Tax=Phyl... [more]
A0A858X5H5_9HYPH3.870e-5568.00Probable membrane transporter protein n=2 Tax=Star... [more]
A0A2W2AKA7_9HYPH1.360e-5468.29Probable membrane transporter protein n=2 Tax=Aest... [more]
A0A840SWQ5_9RHOB1.310e-5364.52Probable membrane transporter protein n=1 Tax=Amar... [more]
UPI001FF0339A2.010e-5268.85sulfite exporter TauE/SafE family protein n=1 Tax=... [more]
UPI001BCF11D92.070e-5267.21sulfite exporter TauE/SafE family protein n=1 Tax=... [more]
UPI001BD052DE3.910e-5260.80sulfite exporter TauE/SafE family protein n=1 Tax=... [more]
A0A2C9D283_9HYPH2.170e-5165.60Probable membrane transporter protein n=1 Tax=Hart... [more]
UPI001BD516B22.220e-5165.04sulfite exporter TauE/SafE family protein n=4 Tax=... [more]
A0A0P6WC21_9HYPH2.230e-5163.78Probable membrane transporter protein n=3 Tax=Pros... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig54816contigP-wetherbeei_contig54816:138..527 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog639283.Snov_3986
PFAMsTauE
Model size390
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K07090
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.88e-52
EggNOG OGsCOG0730@1|root,COG0730@2|Bacteria,1MVY3@1224|Proteobacteria,2TU6M@28211|Alphaproteobacteria,3EZZ4@335928|Xanthobacteraceae
DescriptionSulfite exporter TauE/SafE
Cds size390
COG categoryS
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186818.1897082-CDS-P-wetherbeei_contig54816:137..5271683186818.1897082-CDS-P-wetherbeei_contig54816:137..527Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig54816 138..527 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig54816.1.1prot_P-wetherbeei_contig54816.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig54816 138..527 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig54816.1.1

>prot_P-wetherbeei_contig54816.1.1 ID=prot_P-wetherbeei_contig54816.1.1|Name=mRNA_P-wetherbeei_contig54816.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=130bp
PKPADVPRGIFWGAITGFTSFVSHSGAPPYQMYVLPQRLEKMVYAGTTTI
IFAIINLLKLPPYWFLGQVNLASLETALLLSPLAIIGAYMGYRLTLILPE
KIFFRIVEVALFLVSLKLVYDGVAGLTNG*
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mRNA from alignment at P-wetherbeei_contig54816:138..527-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig54816.1.1 ID=mRNA_P-wetherbeei_contig54816.1.1|Name=mRNA_P-wetherbeei_contig54816.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=390bp|location=Sequence derived from alignment at P-wetherbeei_contig54816:138..527- (Phaeothamnion wetherbeei SAG_119_79)
CCGAAACCGGCGGATGTGCCGCGCGGCATTTTCTGGGGGGCCATTACCGG ATTTACAAGTTTTGTCTCGCACTCGGGTGCTCCGCCTTACCAGATGTATG TGCTGCCGCAACGCCTGGAAAAAATGGTCTATGCGGGCACGACGACGATT ATTTTCGCCATCATCAATCTGCTCAAGCTGCCGCCCTACTGGTTTCTGGG CCAGGTGAATCTCGCCAGCCTCGAAACGGCGCTGCTGCTCTCGCCGCTCG CCATTATCGGCGCCTATATGGGTTACCGGCTCACGCTCATCCTGCCGGAG AAAATCTTTTTCCGCATTGTGGAAGTGGCACTGTTCCTGGTCTCGCTGAA GCTGGTTTATGACGGCGTGGCCGGATTGACAAACGGCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig54816:138..527-

>mRNA_P-wetherbeei_contig54816.1.1 ID=mRNA_P-wetherbeei_contig54816.1.1|Name=mRNA_P-wetherbeei_contig54816.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=390bp|location=Sequence derived from alignment at P-wetherbeei_contig54816:138..527- (Phaeothamnion wetherbeei SAG_119_79)
CCGAAACCGGCGGATGTGCCGCGCGGCATTTTCTGGGGGGCCATTACCGG
ATTTACAAGTTTTGTCTCGCACTCGGGTGCTCCGCCTTACCAGATGTATG
TGCTGCCGCAACGCCTGGAAAAAATGGTCTATGCGGGCACGACGACGATT
ATTTTCGCCATCATCAATCTGCTCAAGCTGCCGCCCTACTGGTTTCTGGG
CCAGGTGAATCTCGCCAGCCTCGAAACGGCGCTGCTGCTCTCGCCGCTCG
CCATTATCGGCGCCTATATGGGTTACCGGCTCACGCTCATCCTGCCGGAG
AAAATCTTTTTCCGCATTGTGGAAGTGGCACTGTTCCTGGTCTCGCTGAA
GCTGGTTTATGACGGCGTGGCCGGATTGACAAACGGCTGA
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