mRNA_P-wetherbeei_contig54723.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54723.1.1 vs. uniprot
Match: A0A085F626_9HYPH (CRISPR locus-related DNA-binding protein n=10 Tax=Devosia TaxID=46913 RepID=A0A085F626_9HYPH) HSP 1 Score: 318 bits (815), Expect = 1.380e-107 Identity = 153/166 (92.17%), Postives = 161/166 (96.99%), Query Frame = 1
Query: 4 MSRNFLVVDPEEGIEVLKGLASPIRVKILKLLHMQGPMNGNDIAEKLGLPQSTVSTNIQILEGAGLIRTETQKARKGNQKICHSTFDEVLVMFKEDIKPLRSNSIEVAMPLGLYTSCEVSAPCGLCSTEGIIGLLDVPDTFLDPDRMKTGLIWFTRGYVEYQFPNN 501
MSRNFLVVDPEEGIEVLKGLAS IR++ILKLLH++G MNGNDIAEKLGLPQST+STNIQ+LE AGLIRTETQKARKGNQKICHS FDEVLVMFKEDI PL+SNSIEVAMPLGLYTSCEVSAPCGLCS+EGIIGLLDVPDTFLDPDRMKTGLIWFTRGYVEYQFPNN
Sbjct: 1 MSRNFLVVDPEEGIEVLKGLASTIRIRILKLLHVEGSMNGNDIAEKLGLPQSTISTNIQVLEAAGLIRTETQKARKGNQKICHSMFDEVLVMFKEDISPLKSNSIEVAMPLGLYTSCEVSAPCGLCSSEGIIGLLDVPDTFLDPDRMKTGLIWFTRGYVEYQFPNN 166
BLAST of mRNA_P-wetherbeei_contig54723.1.1 vs. uniprot
Match: A0A0F5FJU4_9HYPH (ArsR family transcriptional regulator n=10 Tax=Hyphomicrobiales TaxID=356 RepID=A0A0F5FJU4_9HYPH) HSP 1 Score: 316 bits (809), Expect = 1.130e-106 Identity = 150/166 (90.36%), Postives = 162/166 (97.59%), Query Frame = 1
Query: 4 MSRNFLVVDPEEGIEVLKGLASPIRVKILKLLHMQGPMNGNDIAEKLGLPQSTVSTNIQILEGAGLIRTETQKARKGNQKICHSTFDEVLVMFKEDIKPLRSNSIEVAMPLGLYTSCEVSAPCGLCSTEGIIGLLDVPDTFLDPDRMKTGLIWFTRGYVEYQFPNN 501
MSRNFLV+DPEEG+EVLKGLAS IRVK+LKLLH +GP+NGNDIAE+LGLPQSTVSTN+QILEGAGLIRTETQKARKGNQKICHSTFDEVLVMFKEDIKPLRSN+IEVAMPLGLYTSCEVSAPCGLCS +GIIGLLDVP+TFLDPDRMK GLIWFTRG++EYQFPNN
Sbjct: 1 MSRNFLVIDPEEGLEVLKGLASAIRVKMLKLLHTEGPLNGNDIAERLGLPQSTVSTNLQILEGAGLIRTETQKARKGNQKICHSTFDEVLVMFKEDIKPLRSNTIEVAMPLGLYTSCEVSAPCGLCSVDGIIGLLDVPNTFLDPDRMKAGLIWFTRGFLEYQFPNN 166
BLAST of mRNA_P-wetherbeei_contig54723.1.1 vs. uniprot
Match: A0A0F5FRV9_9HYPH (ArsR family transcriptional regulator n=1 Tax=Devosia geojensis TaxID=443610 RepID=A0A0F5FRV9_9HYPH) HSP 1 Score: 314 bits (804), Expect = 6.500e-106 Identity = 151/166 (90.96%), Postives = 161/166 (96.99%), Query Frame = 1
Query: 4 MSRNFLVVDPEEGIEVLKGLASPIRVKILKLLHMQGPMNGNDIAEKLGLPQSTVSTNIQILEGAGLIRTETQKARKGNQKICHSTFDEVLVMFKEDIKPLRSNSIEVAMPLGLYTSCEVSAPCGLCSTEGIIGLLDVPDTFLDPDRMKTGLIWFTRGYVEYQFPNN 501
MSRNFLVVDPEEGIEVLKGLAS IRVKILKLLH++GPMNGN+IAE+L LPQSTVSTNIQILEGAGLIRTETQKARKGNQKICHSTFDEVLVMFKEDI PL +N++EVAMPLGLYTSC+VSAPCGLCS+EGIIGLLDVPDTFLDP+RMK GLIWFTRGYVEYQFPNN
Sbjct: 1 MSRNFLVVDPEEGIEVLKGLASTIRVKILKLLHVEGPMNGNEIAERLELPQSTVSTNIQILEGAGLIRTETQKARKGNQKICHSTFDEVLVMFKEDITPLHANTVEVAMPLGLYTSCQVSAPCGLCSSEGIIGLLDVPDTFLDPERMKAGLIWFTRGYVEYQFPNN 166
BLAST of mRNA_P-wetherbeei_contig54723.1.1 vs. uniprot
Match: A0A1H9ADI2_9HYPH (Predicted transcriptional regulator n=2 Tax=Devosia sp. YR412 TaxID=1881030 RepID=A0A1H9ADI2_9HYPH) HSP 1 Score: 313 bits (801), Expect = 2.420e-105 Identity = 148/167 (88.62%), Postives = 161/167 (96.41%), Query Frame = 1
Query: 1 AMSRNFLVVDPEEGIEVLKGLASPIRVKILKLLHMQGPMNGNDIAEKLGLPQSTVSTNIQILEGAGLIRTETQKARKGNQKICHSTFDEVLVMFKEDIKPLRSNSIEVAMPLGLYTSCEVSAPCGLCSTEGIIGLLDVPDTFLDPDRMKTGLIWFTRGYVEYQFPNN 501
AMSRNFLVVDPE+ ++VL+GLASP+RVKILKLLH++GPMNGNDIAEKL LPQSTVSTNIQILE AGLIRTETQKARKGNQKICHSTFDEVLVMFKED+KPL+SN+IEVAMPLGLYTSC VSAPCGLCS +GIIGLLDVPDTFL+PDRMK GLIWFTRGY+EYQFPNN
Sbjct: 7 AMSRNFLVVDPEDNLDVLRGLASPVRVKILKLLHVEGPMNGNDIAEKLELPQSTVSTNIQILESAGLIRTETQKARKGNQKICHSTFDEVLVMFKEDVKPLKSNTIEVAMPLGLYTSCHVSAPCGLCSADGIIGLLDVPDTFLEPDRMKAGLIWFTRGYLEYQFPNN 173
BLAST of mRNA_P-wetherbeei_contig54723.1.1 vs. uniprot
Match: A0A0Q8IMR9_9HYPH (ArsR family transcriptional regulator n=10 Tax=Bacteria TaxID=2 RepID=A0A0Q8IMR9_9HYPH) HSP 1 Score: 311 bits (796), Expect = 1.070e-104 Identity = 148/166 (89.16%), Postives = 162/166 (97.59%), Query Frame = 1
Query: 4 MSRNFLVVDPEEGIEVLKGLASPIRVKILKLLHMQGPMNGNDIAEKLGLPQSTVSTNIQILEGAGLIRTETQKARKGNQKICHSTFDEVLVMFKEDIKPLRSNSIEVAMPLGLYTSCEVSAPCGLCSTEGIIGLLDVPDTFLDPDRMKTGLIWFTRGYVEYQFPNN 501
MSRNFLVVDPEE IEVLKGLASPIRV+ILKLLH++GP+NGNDIA++L LPQSTVSTN+QILE AGLIRTETQKARKGNQKICHSTFDEVLVMFKEDI+PL+SNSIEVAMPLGLYTSCEVSAPCGLCSTEGIIGLLDVP+T+L+PDRMK GLIWFTRG++EYQFPNN
Sbjct: 1 MSRNFLVVDPEEDIEVLKGLASPIRVRILKLLHVEGPLNGNDIADRLDLPQSTVSTNLQILETAGLIRTETQKARKGNQKICHSTFDEVLVMFKEDIRPLKSNSIEVAMPLGLYTSCEVSAPCGLCSTEGIIGLLDVPETYLEPDRMKAGLIWFTRGFLEYQFPNN 166
BLAST of mRNA_P-wetherbeei_contig54723.1.1 vs. uniprot
Match: A0A1E4DSU4_9HYPH (ArsR family transcriptional regulator n=2 Tax=Devosiaceae TaxID=2831106 RepID=A0A1E4DSU4_9HYPH) HSP 1 Score: 311 bits (796), Expect = 1.070e-104 Identity = 150/166 (90.36%), Postives = 160/166 (96.39%), Query Frame = 1
Query: 4 MSRNFLVVDPEEGIEVLKGLASPIRVKILKLLHMQGPMNGNDIAEKLGLPQSTVSTNIQILEGAGLIRTETQKARKGNQKICHSTFDEVLVMFKEDIKPLRSNSIEVAMPLGLYTSCEVSAPCGLCSTEGIIGLLDVPDTFLDPDRMKTGLIWFTRGYVEYQFPNN 501
MSRNFLVVDPEE ++VLKGLAS IRVKILKLLH++GP+NGNDIAE+L LPQSTVSTN+QILE AGLIRTETQKARKGNQKICHSTFDEVLVMFKEDI LRSN+IEVAMPLGLYTSC+VSAPCGLCSTEGIIGLLDVPDTFLDP+RMKTGLIWFTRGYVEYQFPNN
Sbjct: 1 MSRNFLVVDPEEDLDVLKGLASAIRVKILKLLHIEGPLNGNDIAERLSLPQSTVSTNLQILENAGLIRTETQKARKGNQKICHSTFDEVLVMFKEDIGQLRSNTIEVAMPLGLYTSCDVSAPCGLCSTEGIIGLLDVPDTFLDPERMKTGLIWFTRGYVEYQFPNN 166
BLAST of mRNA_P-wetherbeei_contig54723.1.1 vs. uniprot
Match: A0A0Q7I2F0_9HYPH (ArsR family transcriptional regulator n=2 Tax=unclassified Devosia TaxID=196773 RepID=A0A0Q7I2F0_9HYPH) HSP 1 Score: 306 bits (784), Expect = 7.130e-103 Identity = 145/166 (87.35%), Postives = 156/166 (93.98%), Query Frame = 1
Query: 4 MSRNFLVVDPEEGIEVLKGLASPIRVKILKLLHMQGPMNGNDIAEKLGLPQSTVSTNIQILEGAGLIRTETQKARKGNQKICHSTFDEVLVMFKEDIKPLRSNSIEVAMPLGLYTSCEVSAPCGLCSTEGIIGLLDVPDTFLDPDRMKTGLIWFTRGYVEYQFPNN 501
MSRNFLV+DPE+GI+VLKGLASP+RV ILKLLHMQGPMNGNDIA L LPQSTVSTNIQILE AGLIRTETQKARKG+QKICHS FDEVLV FK+D+KPL+SN+IEVAMP+GLYTSC VSAPCGLCS +GIIGLLDVPDTFLDPDRMK GLIWFTRGYVEYQFPNN
Sbjct: 1 MSRNFLVIDPEDGIDVLKGLASPVRVSILKLLHMQGPMNGNDIARHLALPQSTVSTNIQILESAGLIRTETQKARKGSQKICHSLFDEVLVTFKDDVKPLKSNTIEVAMPIGLYTSCAVSAPCGLCSADGIIGLLDVPDTFLDPDRMKAGLIWFTRGYVEYQFPNN 166
BLAST of mRNA_P-wetherbeei_contig54723.1.1 vs. uniprot
Match: A0A0F5PV16_9HYPH (Predicted transcriptional regulator n=3 Tax=Hyphomicrobiales TaxID=356 RepID=A0A0F5PV16_9HYPH) HSP 1 Score: 305 bits (781), Expect = 1.970e-102 Identity = 148/166 (89.16%), Postives = 158/166 (95.18%), Query Frame = 1
Query: 4 MSRNFLVVDPEEGIEVLKGLASPIRVKILKLLHMQGPMNGNDIAEKLGLPQSTVSTNIQILEGAGLIRTETQKARKGNQKICHSTFDEVLVMFKEDIKPLRSNSIEVAMPLGLYTSCEVSAPCGLCSTEGIIGLLDVPDTFLDPDRMKTGLIWFTRGYVEYQFPNN 501
MSRNFLV+DPE+GI VLKGLAS IR+K+LKLLH++GPMNGNDIA +LGLPQSTVSTN+QILE AGLIRTETQKARKGNQKICHSTFDEVLVMFKEDIKP RSN IEVAMPLGLYTSCEVSAPCGLCS +GIIGLLDVPDTFLDP RMKTGLIWFTRG+VEYQFPNN
Sbjct: 1 MSRNFLVIDPEDGIAVLKGLASSIRIKMLKLLHVEGPMNGNDIAARLGLPQSTVSTNLQILESAGLIRTETQKARKGNQKICHSTFDEVLVMFKEDIKP-RSNVIEVAMPLGLYTSCEVSAPCGLCSVDGIIGLLDVPDTFLDPGRMKTGLIWFTRGFVEYQFPNN 165
BLAST of mRNA_P-wetherbeei_contig54723.1.1 vs. uniprot
Match: A0A5B9DJT9_9HYPH (Helix-turn-helix domain-containing protein n=2 Tax=Devosiaceae TaxID=2831106 RepID=A0A5B9DJT9_9HYPH) HSP 1 Score: 304 bits (778), Expect = 5.820e-102 Identity = 146/166 (87.95%), Postives = 156/166 (93.98%), Query Frame = 1
Query: 4 MSRNFLVVDPEEGIEVLKGLASPIRVKILKLLHMQGPMNGNDIAEKLGLPQSTVSTNIQILEGAGLIRTETQKARKGNQKICHSTFDEVLVMFKEDIKPLRSNSIEVAMPLGLYTSCEVSAPCGLCSTEGIIGLLDVPDTFLDPDRMKTGLIWFTRGYVEYQFPNN 501
MSRNFLVVDPEEG+EVL+GLAS IR+KILKLLH++GP+N NDIAE L LPQSTVS+N+QILE AGLIRTETQKARKGNQKICHSTFDEVLVMFKEDI PL +IEVAMPLGLYTSCEVSAPCGLCSTEGIIGLLDVPDTFLDP+RMK GLIWFTRGYVEYQFPNN
Sbjct: 1 MSRNFLVVDPEEGLEVLRGLASAIRIKILKLLHVRGPLNVNDIAEALALPQSTVSSNVQILEDAGLIRTETQKARKGNQKICHSTFDEVLVMFKEDINPLHKEAIEVAMPLGLYTSCEVSAPCGLCSTEGIIGLLDVPDTFLDPERMKAGLIWFTRGYVEYQFPNN 166
BLAST of mRNA_P-wetherbeei_contig54723.1.1 vs. uniprot
Match: A0A6M1SPQ9_9HYPH (Helix-turn-helix domain-containing protein n=1 Tax=Devosia aurantiaca TaxID=2714858 RepID=A0A6M1SPQ9_9HYPH) HSP 1 Score: 302 bits (774), Expect = 2.280e-101 Identity = 142/166 (85.54%), Postives = 157/166 (94.58%), Query Frame = 1
Query: 4 MSRNFLVVDPEEGIEVLKGLASPIRVKILKLLHMQGPMNGNDIAEKLGLPQSTVSTNIQILEGAGLIRTETQKARKGNQKICHSTFDEVLVMFKEDIKPLRSNSIEVAMPLGLYTSCEVSAPCGLCSTEGIIGLLDVPDTFLDPDRMKTGLIWFTRGYVEYQFPNN 501
MSRNFLV+DPE+G+EVL+GLASPIR+++LKLLH+QGP+NGNDIA KL LPQSTVSTN+QILE AGLIRTE QKARKGNQKICHSTFDEVLVMFKED+KPL +NSIEVAMPLGLYTSCEVSAPCGLCS +GI+GLLDVPDTFLDP RM GLIWFTRG+VEYQFPNN
Sbjct: 1 MSRNFLVIDPEDGMEVLRGLASPIRIRMLKLLHVQGPLNGNDIAAKLDLPQSTVSTNLQILENAGLIRTEMQKARKGNQKICHSTFDEVLVMFKEDMKPLGNNSIEVAMPLGLYTSCEVSAPCGLCSADGIVGLLDVPDTFLDPGRMNAGLIWFTRGFVEYQFPNN 166 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54723.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54723.1.1 >prot_P-wetherbeei_contig54723.1.1 ID=prot_P-wetherbeei_contig54723.1.1|Name=mRNA_P-wetherbeei_contig54723.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp MSRNFLVVDPEEGIEVLKGLASPIRVKILKLLHMQGPMNGNDIAEKLGLPback to top mRNA from alignment at P-wetherbeei_contig54723:1..501- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54723.1.1 ID=mRNA_P-wetherbeei_contig54723.1.1|Name=mRNA_P-wetherbeei_contig54723.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig54723:1..501- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54723:1..501- >mRNA_P-wetherbeei_contig54723.1.1 ID=mRNA_P-wetherbeei_contig54723.1.1|Name=mRNA_P-wetherbeei_contig54723.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig54723:1..501- (Phaeothamnion wetherbeei SAG_119_79)back to top |