mRNA_P-wetherbeei_contig54670.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54670.1.1 vs. uniprot
Match: A0A1F4C7F3_9PROT (Ribonuclease VapC n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13b TaxID=1797496 RepID=A0A1F4C7F3_9PROT) HSP 1 Score: 143 bits (361), Expect = 2.830e-41 Identity = 76/139 (54.68%), Postives = 92/139 (66.19%), Query Frame = 1
Query: 1 MAFSRIVLDASVTIEWFLPDKPSASAYAGEVLQAIEARELLPMVPDLWHYEVGSVLVAAKRQRRISAKRLTAIAGQLAELRPFTINPRMTEADVIAKAGAFHLQGYDTVYFDLAKRLRVSIASTDGGIRTACRAHGVEL 417
MA RIVLDASV +EWFLP YA +L+ I A EL P VPDLWHYE+GSVLVAAKR +RISA +L A L L T+ + A+V+ +HLQGYD VYF+LA+RL V +A+ DGG+RTAC VEL
Sbjct: 1 MAAERIVLDASVAVEWFLPGGGPGQQYAEGILERISAGELFPAVPDLWHYELGSVLVAAKRDKRISAAKLGASQATLRALEFETLAVELDAAEVVDLGLRYHLQGYDVVYFELARRLGVPLATLDGGMRTACGIFRVEL 139
BLAST of mRNA_P-wetherbeei_contig54670.1.1 vs. uniprot
Match: A0A1F2RH48_9BACT (Ribonuclease VapC n=1 Tax=Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28 TaxID=1797180 RepID=A0A1F2RH48_9BACT) HSP 1 Score: 83.6 bits (205), Expect = 1.060e-17 Identity = 50/138 (36.23%), Postives = 76/138 (55.07%), Query Frame = 1
Query: 10 SRIVLDASVTIEWFLPDKPSASAYAGEV-LQAIEARELLPMVPDLWHYEVGSVLVAAKRQRRISAKRLTAIAGQLAELRPFTINPRMTEADVIAKAGAFHLQGYDTVYFDLAKRLRVSIASTDGGIRTACRAHGVELW 420
+ +VLDASV++ WFL + P +AYA V + A+E L VP W E+G VL+ R++ + +L L + T V+ A +HLQGYD +YFDLA+ L++ +A+ D G R A A+GV ++
Sbjct: 3 TELVLDASVSLAWFLKETPERAAYAAAVNVAAVEGAIL--HVPVQWGVEMGHVLLREYRRKVLKRGKLREALEDLDNFDIYVHIELFTARRVVELARRYHLQGYDALYFDLARSLKLPLATLDHGHRQAAEAYGVTVF 138
BLAST of mRNA_P-wetherbeei_contig54670.1.1 vs. uniprot
Match: A0A1F3YFI9_9PROT (Ribonuclease VapC n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YFI9_9PROT) HSP 1 Score: 80.1 bits (196), Expect = 2.480e-16 Identity = 51/139 (36.69%), Postives = 76/139 (54.68%), Query Frame = 1
Query: 13 RIVLDASVTIEWFLPDKPSASAYAGEVLQAIEARELLPMVPDLWHYEVGSVLVAAKRQRRISAKRLTAIAGQLAELRPFTINPRM---TEADVIAKAGAFHLQGYDTVYFDLAKRLRVSIASTDGGIRTACRAHGVELW 420
+VLDASV++ WFL + P +AYA V A +L VP W E+G VL+ +R++ + +L L +L F I + T V+ A +HLQGYD +YFDLA+ L + +A+ D G R A + H V ++
Sbjct: 4 ELVLDASVSLAWFLKETPERAAYAAAVSAAAADGAILH-VPVQWGIEMGHVLLREQRRKVLKRGKLQ---QALEDLDCFDIRVHLELFTPRRVVDLARRYHLQGYDALYFDLARTLGLPLATLDHGHRQAAKVHKVAVF 138
BLAST of mRNA_P-wetherbeei_contig54670.1.1 vs. uniprot
Match: UPI001AE8632E (type II toxin-antitoxin system VapC family toxin n=1 Tax=unclassified Cupriavidus TaxID=2640874 RepID=UPI001AE8632E) HSP 1 Score: 75.1 bits (183), Expect = 2.200e-14 Identity = 45/138 (32.61%), Postives = 68/138 (49.28%), Query Frame = 1
Query: 10 SRIVLDASVTIEWFLP-DKPSASAYAGEVLQAIEARELLPMVPDLWHYEVGSVLVAAKRQRRISAKRLTAIAGQLAELRPFTINPRMTEADVIAKAGAFHLQGYDTVYFDLAKRLRVSIASTDGGIRTACRAHGVELW 420
+ +V+DASV + WFLP D Y+ V AI + VP+++ E L+ R R +++ A + + ++ +A FHLQGYD++YF +A+ IA+ D GI TACR GVE W
Sbjct: 2 TTVVIDASVALGWFLPSDNEEMLRYSASVHDAIAVGTIRAAVPNIFFVECSHKLLRHGRSARWGEEKVAQCAAYIQATISEIVAEYYPMEAMVRRAHEFHLQGYDSLYFVVARVNDWQIATLDKGILTACRRFGVETW 139
BLAST of mRNA_P-wetherbeei_contig54670.1.1 vs. uniprot
Match: Q7NK02_GLOVI (Gll1679 protein n=1 Tax=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) TaxID=251221 RepID=Q7NK02_GLOVI) HSP 1 Score: 67.0 bits (162), Expect = 2.510e-11 Identity = 45/138 (32.61%), Postives = 76/138 (55.07%), Query Frame = 1
Query: 10 SRIVLDASVTIEWFLPDKPSASAYAGEVLQAIEARELLPMVPDLWHYEVGSVLVAAKRQRRISAKRLTAIAGQLAELRPFTINPRMTEA--DVIAKAGAFHLQGYDTVYFDLAKRLRVSIASTDGGIRTACRAHGVEL 417
S VLD S+ I W + D+ A+ +L+ + R+ +VP LW++E+G+VL+ A+R+ R++A +++A G +AEL + R A + + A L YD Y +LA R + IA+ D +R A GV++
Sbjct: 2 SSFVLDCSIAICWCIEDE--ATPQTDALLERL--RDEGAIVPPLWYFELGNVLLQAERRGRLNAAQVSARLGLIAELPISSDEGRAARALHETLLLARGEKLTLYDAAYLELAMRRALPIATKDSALRAAALRVGVDV 135
BLAST of mRNA_P-wetherbeei_contig54670.1.1 vs. uniprot
Match: A0A7X4C3N2_9BACT (Ribonuclease VapC n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A7X4C3N2_9BACT) HSP 1 Score: 67.0 bits (162), Expect = 2.510e-11 Identity = 49/136 (36.03%), Postives = 70/136 (51.47%), Query Frame = 1
Query: 19 VLDASVTIEWFLPDKPSASAYAGEVLQAIEARELLPMVPDLWHYEVGSVLVAAKRQRRISAKRLTAIAGQLAELRPFTINPRMTE---ADVIAKAGAFHLQGYDTVYFDLAKRLRVSIASTDGGIRTACRAHGVEL 417
VLD SVT+ W PD+ A+ + A+ E VP LW EV +VL+ A R+ RI+ I L L P TI+P T V+ A A L YD++Y +LA R+R+ +A+ D + A R G+E+
Sbjct: 4 VLDCSVTMAWVFPDE--ATEETARLRDALT--EGRAFVPSLWPIEVANVLLVATRRGRIAESDWPRIWRNLEAL-PLTIDPVSTSRIRGPVLGVAHAHGLSVYDSMYLELAIRMRLPLATLDRALGEAARTAGLEV 134
BLAST of mRNA_P-wetherbeei_contig54670.1.1 vs. uniprot
Match: A0A6L8EK67_9GAMM (Type II toxin-antitoxin system VapC family toxin n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L8EK67_9GAMM) HSP 1 Score: 66.6 bits (161), Expect = 3.310e-11 Identity = 47/133 (35.34%), Postives = 68/133 (51.13%), Query Frame = 1
Query: 19 VLDASVTIEWFLPDKPSASAYAGEVLQAIEARELLPMVPDLWHYEVGSVLVAAKRQRRISAKRLTAIAGQLAELRPFTINPRMTEADVIAKAGAFHLQGYDTVYFDLAKRLRVSIASTDGGIRTACRAHGVEL 417
VLDASVT+ WFL D+ + A + +++ R+ VP LWH EV + L+ A+R+ R+SA R++ L L P + V + A L YD VY +LAKR +AS D + A GV +
Sbjct: 5 VLDASVTLAWFLDDEQAPQA---DNVRSRLVRDSA-FVPQLWHLEVRNGLIIAERRGRLSATRMSECLKALKWL-PIQTDSEAVLEIVTSLARLHKLSVYDAVYLELAKRRDAVLASLDAALLRAAAEEGVRV 132
BLAST of mRNA_P-wetherbeei_contig54670.1.1 vs. uniprot
Match: A0A7X3Y9P5_9PROT (Type II toxin-antitoxin system VapC family toxin n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7X3Y9P5_9PROT) HSP 1 Score: 66.2 bits (160), Expect = 4.970e-11 Identity = 49/135 (36.30%), Postives = 65/135 (48.15%), Query Frame = 1
Query: 19 VLDASVTIEWFLPDKPSASAYAGEVLQAIEARELLPMVPDLWHYEVGSVLVAAKRQRRISAKRLTAIAGQLAELRPFTINPRMTEA---DVIAKAGAFHLQGYDTVYFDLAKRLRVSIASTDGGIRTACRAHGVE 414
VLD SV + W PD+ S A + L+ + VP LW EVGSVL+AA R+RRI I L L P I T +A A L YD Y +LA R+R+ +A+ D + A RA G++
Sbjct: 4 VLDCSVAMAWVFPDESSP---ATDRLRDSLVNDRA-FVPSLWPVEVGSVLLAATRRRRIGVGEWPVICASLDAL-PIEIEQVSTSCVWGPALALADRHDLSVYDAAYLELALRMRLPLATLDRALAAAARAAGLD 133
BLAST of mRNA_P-wetherbeei_contig54670.1.1 vs. uniprot
Match: UPI0019B500ED (Type II toxin-antitoxin system VapC family toxin n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=UPI0019B500ED) HSP 1 Score: 64.7 bits (156), Expect = 1.900e-10 Identity = 40/133 (30.08%), Postives = 70/133 (52.63%), Query Frame = 1
Query: 19 VLDASVTIEWFLPDKPSASAYAGEVLQAIEARELLPMVPDLWHYEVGSVLVAAKRQRRISAKRLTAIAGQLAELRPFTINPRMTEADVIAKAGAFHLQGYDTVYFDLAKRLRVSIASTDGGIRTACRAHGVEL 417
VLD SV WFL ++ ++ Y+ +L+ ++ VP W E +VL A ++R++A+ + Q+ L ++ ++++ A F L YD Y +LA RL++ +A+TDG +R A A GV +
Sbjct: 4 VLDNSVCCGWFLANQ--STPYSESILERLQDDRAA--VPAFWELEFTNVLRTACLRQRMTAEAAQRVISQIVSLPIDVDRNKVPASEILGLALRFGLSSYDAAYLELALRLQLPLATTDGPLRAAALASGVGI 132
BLAST of mRNA_P-wetherbeei_contig54670.1.1 vs. uniprot
Match: A0A1F3ZZR7_9PROT (PINc domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F3ZZR7_9PROT) HSP 1 Score: 63.2 bits (152), Expect = 8.560e-10 Identity = 42/128 (32.81%), Postives = 67/128 (52.34%), Query Frame = 1
Query: 19 VLDASVTIEWFLPDKPSASAYAGEVLQAIEARELLPMVPDLWHYEVGSVLVAAKRQRRISAKRLTAIAGQLAELRPFTINPRMTEADVIAKAGAFHLQGYDTVYFDLAKRLRVSIASTDGGIRTACRA 402
V+D SV + W++ D+ AS + + + E VP LW E+ S LV A+R++R++A R A+ A L + +T + A A L YD VYF+LA+R ++ +A+ D + A RA
Sbjct: 6 VIDCSVCLPWYIDDE--ASDFCARLAAMLGRAE--NWVPSLWRPELVSALVNAERRKRMTADRRRAVLENAAGLPLRVDHDTLTVIETGDLASAHDLTPYDAVYFELARRRKLPLATLDATLVKAARA 129 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54670.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54670.1.1 >prot_P-wetherbeei_contig54670.1.1 ID=prot_P-wetherbeei_contig54670.1.1|Name=mRNA_P-wetherbeei_contig54670.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=149bp MAFSRIVLDASVTIEWFLPDKPSASAYAGEVLQAIEARELLPMVPDLWHYback to top mRNA from alignment at P-wetherbeei_contig54670:71..517+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54670.1.1 ID=mRNA_P-wetherbeei_contig54670.1.1|Name=mRNA_P-wetherbeei_contig54670.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=447bp|location=Sequence derived from alignment at P-wetherbeei_contig54670:71..517+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54670:71..517+ >mRNA_P-wetherbeei_contig54670.1.1 ID=mRNA_P-wetherbeei_contig54670.1.1|Name=mRNA_P-wetherbeei_contig54670.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=447bp|location=Sequence derived from alignment at P-wetherbeei_contig54670:71..517+ (Phaeothamnion wetherbeei SAG_119_79)back to top |