mRNA_P-wetherbeei_contig54663.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54663.1.1 vs. uniprot
Match: UPI001C3DD820 (heat-inducible transcriptional repressor HrcA n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3DD820) HSP 1 Score: 265 bits (676), Expect = 8.430e-86 Identity = 137/165 (83.03%), Postives = 148/165 (89.70%), Query Frame = 1
Query: 1 GAFLNDRIVGLAVGSRTIDGRLEDPSLSPKERGFLAVLAPAITGLDAGAPGSIFIGGQARFLAEQRHLDLLAIDALMESLEERYQLLALLRGALSRNQVYLRIGTELPDQSLVGLSMVAANYGVPRRNLGTVSLFGPTRMDYRLAMATVRGAAQILSRYVEGVYE 495
GAFLN+++ G+ VGSR I+GRL DPSL +ERGFL VLAPAIT LD G SIFIGG+ARFLAEQRHLDL+AIDALMESLEERY LLA+LRGALSRNQVYLRIG ELPD+SL GLSMVAANYGV RRNLGTVSL GPTRMDYRLAMATVRGAAQ+LSRYVEGVYE
Sbjct: 196 GAFLNEQLTGVTVGSRLIEGRLADPSLGMRERGFLGVLAPAITDLDPGVEESIFIGGRARFLAEQRHLDLMAIDALMESLEERYALLAMLRGALSRNQVYLRIGAELPDRSLSGLSMVAANYGVARRNLGTVSLIGPTRMDYRLAMATVRGAAQLLSRYVEGVYE 360
BLAST of mRNA_P-wetherbeei_contig54663.1.1 vs. uniprot
Match: UPI001C3DFDD0 (heat-inducible transcriptional repressor HrcA n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3DFDD0) HSP 1 Score: 253 bits (647), Expect = 1.720e-81 Identity = 133/165 (80.61%), Postives = 143/165 (86.67%), Query Frame = 1
Query: 1 GAFLNDRIVGLAVGSRTIDGRLEDPSLSPKERGFLAVLAPAITGLDAGAPGSIFIGGQARFLAEQRHLDLLAIDALMESLEERYQLLALLRGALSRNQVYLRIGTELPDQSLVGLSMVAANYGVPRRNLGTVSLFGPTRMDYRLAMATVRGAAQILSRYVEGVYE 495
GAFLN+R+ GL VGSR + RLE+PSLS ER FL VL PAIT LD P SI IGG+ARFLAEQRHLDL+AIDALMESLEERYQLL LLRGALSRNQVYLRIG+E+P Q + GLSMVAANYGV RRNLGTVSL GPTRMDYRLAMATVRGAAQ+LSRYVEGVYE
Sbjct: 190 GAFLNERLAGLTVGSRMVGTRLEEPSLSATERRFLDVLTPAITELDPADPASIHIGGRARFLAEQRHLDLIAIDALMESLEERYQLLELLRGALSRNQVYLRIGSEIPGQRMSGLSMVAANYGVARRNLGTVSLIGPTRMDYRLAMATVRGAAQLLSRYVEGVYE 354
BLAST of mRNA_P-wetherbeei_contig54663.1.1 vs. uniprot
Match: A0A7W0TG10_9ACTN (Heat-inducible transcription repressor HrcA n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7W0TG10_9ACTN) HSP 1 Score: 157 bits (397), Expect = 4.540e-44 Identity = 83/164 (50.61%), Postives = 114/164 (69.51%), Query Frame = 1
Query: 4 AFLNDRIVGLAVGSRTIDGRLEDPSLSPKERGFLAVLAPAITGLDAGAPGSIFIGGQARFLAEQRHLDLLAIDALMESLEERYQLLALLRGALSRNQVYLRIGTELPDQSLVGLSMVAANYGVPRRNLGTVSLFGPTRMDYRLAMATVRGAAQILSRYVEGVYE 495
++LN+ +VG +G+RT+ RL +P+L P ER FL LAPA L A A S+++ G AR LAE R D+ ++ L+E LE R +L +L AL + ++Y+RIG E +L GLS+VAANYG+P+RNLGTVS+ GPTRMDY +A+ VR AA LSR+VE VY+
Sbjct: 172 SYLNEALVGKGLGARTLRSRLTEPTLPPTERSFLEGLAPAFIDLAATAGDSLYVEGTARLLAEHRFQDVSQLNELLELLERRVSMLGVLSAALDQRELYVRIGGENEAPALRGLSLVAANYGLPQRNLGTVSVIGPTRMDYGVAIGAVRTAALQLSRFVEDVYD 335
BLAST of mRNA_P-wetherbeei_contig54663.1.1 vs. uniprot
Match: UPI00040C1D1F (heat-inducible transcriptional repressor HrcA n=1 Tax=Solirubrobacter soli TaxID=363832 RepID=UPI00040C1D1F) HSP 1 Score: 153 bits (386), Expect = 1.850e-42 Identity = 79/164 (48.17%), Postives = 111/164 (67.68%), Query Frame = 1
Query: 1 GAFLNDRIVGLAVGSRTIDGRLEDPSLSPKERGFLAVLAPAITGLDAGAPGSIFIGGQARFLAEQRHLDLLAIDALMESLEERYQLLALLRGALSRNQVYLRIGTELPDQSLVGLSMVAANYGVPRRNLGTVSLFGPTRMDYRLAMATVRGAAQILSRYVEGVY 492
G++LN+R+VG+ +G+R + +L DPSL +ER F+ LAP T L A ++++ G R ++E R DL ++ALME LE R +L +L AL Y+RIG E P +L LS+VAANYG+P+RNLGTVS+ GPTRMDY A+ +VR AA LSR++E +Y
Sbjct: 171 GSYLNERLVGMGLGARMLHSKLADPSLGARERSFIEDLAPVFTELVETAEDTLYVDGAHRLVSEYRIQDLSQLNALMEMLERRVSMLGVLSAALDSRSSYVRIGVENPQPALQSLSLVAANYGLPQRNLGTVSVIGPTRMDYARAIRSVREAAFELSRFIEELY 334
BLAST of mRNA_P-wetherbeei_contig54663.1.1 vs. uniprot
Match: A0A7V9Q1D9_9ACTN (Heat-inducible transcription repressor HrcA n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7V9Q1D9_9ACTN) HSP 1 Score: 153 bits (386), Expect = 2.280e-42 Identity = 81/164 (49.39%), Postives = 110/164 (67.07%), Query Frame = 1
Query: 4 AFLNDRIVGLAVGSRTIDGRLEDPSLSPKERGFLAVLAPAITGLDAGAPGSIFIGGQARFLAEQRHLDLLAIDALMESLEERYQLLALLRGALSRNQVYLRIGTELPDQSLVGLSMVAANYGVPRRNLGTVSLFGPTRMDYRLAMATVRGAAQILSRYVEGVYE 495
+FLN+ +VGL +G+R + RL D +L P ER F+ + PA T L+ A +++ G AR LAE R D+ ++ALM+ LE + LL LL+ AL Y+RIG+E D +L L++VAANYG+P+RNLGTVS+ GPTRMDY L + VR A LSR+VE VYE
Sbjct: 178 SFLNETLVGLGIGARMFNFRLNDAALGPTERAFVESIRPAFTQLEQTAGDDLYVEGAARLLAECRWQDVSQLNALMDLLEHKRSLLGLLKNALGERGAYVRIGSENTDPALQTLALVAANYGLPQRNLGTVSVIGPTRMDYALTIRAVRETAFQLSRFVEDVYE 341
BLAST of mRNA_P-wetherbeei_contig54663.1.1 vs. uniprot
Match: A0A660L4N3_9ACTN (Heat-inducible transcription repressor HrcA n=1 Tax=Solirubrobacter pauli TaxID=166793 RepID=A0A660L4N3_9ACTN) HSP 1 Score: 152 bits (383), Expect = 5.180e-42 Identity = 81/164 (49.39%), Postives = 109/164 (66.46%), Query Frame = 1
Query: 1 GAFLNDRIVGLAVGSRTIDGRLEDPSLSPKERGFLAVLAPAITGLDAGAPGSIFIGGQARFLAEQRHLDLLAIDALMESLEERYQLLALLRGALSRNQVYLRIGTELPDQSLVGLSMVAANYGVPRRNLGTVSLFGPTRMDYRLAMATVRGAAQILSRYVEGVY 492
G++LN+R+VG+ +G+R + RL D SL ER F+ LAPA L A ++++ G R L+E R D+ ++ALME LE R +L +L AL Y+RIG E P +L LS+VAANYG+P+RNLGTVS+ GPTRMDY A+ TVR AA LSR+VE +Y
Sbjct: 171 GSYLNERLVGMGLGARMLGSRLNDVSLPATERAFVTELAPAFLELVETADDTLYVDGAHRLLSEYRFQDVSQLNALMEMLERRVSMLGVLSTALGSRGTYVRIGIENPQPALQSLSLVAANYGLPQRNLGTVSVIGPTRMDYSRAIRTVREAAHELSRFVEELY 334
BLAST of mRNA_P-wetherbeei_contig54663.1.1 vs. uniprot
Match: A0A7V9F0C1_9ACTN (Heat-inducible transcription repressor HrcA n=1 Tax=Thermoleophilaceae bacterium TaxID=2732252 RepID=A0A7V9F0C1_9ACTN) HSP 1 Score: 152 bits (383), Expect = 6.520e-42 Identity = 81/164 (49.39%), Postives = 111/164 (67.68%), Query Frame = 1
Query: 4 AFLNDRIVGLAVGSRTIDGRLEDPSLSPKERGFLAVLAPAITGLDAGAPGSIFIGGQARFLAEQRHLDLLAIDALMESLEERYQLLALLRGALSRNQVYLRIGTELPDQSLVGLSMVAANYGVPRRNLGTVSLFGPTRMDYRLAMATVRGAAQILSRYVEGVYE 495
++LN+ + G++VG+R + +L L P+ER FL LAPA T L+ A ++F+ G AR L E R +L + AL+++LE R LLA++R +LS + VYLRIG+E P L +SMVAANYGV RRNLG V++ GP RMDY LA+ VR AA LSR+V VY+
Sbjct: 180 SYLNEVMGGMSVGARMLHAKLTAIDLDPRERAFLETLAPAFTELEDSAGDTLFVDGAARLLTEHRFQELPQLSALLDALERRVALLAVMRASLSESSVYLRIGSENPTPELRSVSMVAANYGVARRNLGAVTVLGPLRMDYPLAIMAVRQAAAELSRFVAEVYD 343
BLAST of mRNA_P-wetherbeei_contig54663.1.1 vs. uniprot
Match: A0A7K0R6L8_9ACTN (Heat-inducible transcription repressor HrcA n=2 Tax=root TaxID=1 RepID=A0A7K0R6L8_9ACTN) HSP 1 Score: 148 bits (373), Expect = 1.310e-41 Identity = 83/165 (50.30%), Postives = 109/165 (66.06%), Query Frame = 1
Query: 1 GAFLNDRIVGLAVGSRTIDGRLEDPSLSPKERGFLAVLAPAITGLDAGAPGSIFIGGQARFLAEQRHLDLLAIDALMESLEERYQLLALLRGALSRNQVYLRIGTELPDQSLVGLSMVAANYGVPRRNLGTVSLFGPTRMDYRLAMATVRGAAQILSRYVEGVYE 495
G +LN+R+VGL +G+R ++ RL+DPSL E+ FL L PA L A ++++ G AR LA R DL I+ L+ +LE R LL +LR AL V +RIG+E +L LS+VAA YG+P+R LGTVS+ GP RMDY A+ATVR AA LSRYVE VY+
Sbjct: 70 GEYLNERLVGLGLGARMVNSRLQDPSLGVWEQRFLEALGPAFAELSATQEDTVYVEGAARLLAADRLQDLAQINELVTALERRVALLGVLRVALGERGVLVRIGSENELPALRSLSVVAAGYGLPQRKLGTVSVIGPVRMDYGEAIATVREAAVQLSRYVEDVYD 234
BLAST of mRNA_P-wetherbeei_contig54663.1.1 vs. uniprot
Match: UPI00040A832A (heat-inducible transcriptional repressor HrcA n=1 Tax=Solirubrobacter sp. URHD0082 TaxID=1298857 RepID=UPI00040A832A) HSP 1 Score: 150 bits (378), Expect = 2.950e-41 Identity = 78/164 (47.56%), Postives = 111/164 (67.68%), Query Frame = 1
Query: 1 GAFLNDRIVGLAVGSRTIDGRLEDPSLSPKERGFLAVLAPAITGLDAGAPGSIFIGGQARFLAEQRHLDLLAIDALMESLEERYQLLALLRGALSRNQVYLRIGTELPDQSLVGLSMVAANYGVPRRNLGTVSLFGPTRMDYRLAMATVRGAAQILSRYVEGVY 492
G++LN+++VG +G+R + RL DP+L+ ER F+ L+PA T L A ++++ G R L+E R D+ ++ALME LE R LL +L AL Y+RIG E + +L LS+VAANYG+P+RNLGTVS+ GPTRMDY A+ +VR AA LSR++E +Y
Sbjct: 172 GSYLNEKLVGTGLGARMLHSRLADPALAASERAFVEELSPAFTELAETAEDTLYVDGAHRLLSEYRFQDVSQLNALMEMLERRVSLLGVLTAALDSRDAYVRIGRENSEPALRSLSLVAANYGLPQRNLGTVSVIGPTRMDYARAIRSVRDAAFQLSRFMEELY 335
BLAST of mRNA_P-wetherbeei_contig54663.1.1 vs. uniprot
Match: A0A7K0QNV0_9ACTN (Heat-inducible transcription repressor HrcA n=2 Tax=root TaxID=1 RepID=A0A7K0QNV0_9ACTN) HSP 1 Score: 150 bits (378), Expect = 3.080e-41 Identity = 83/165 (50.30%), Postives = 107/165 (64.85%), Query Frame = 1
Query: 1 GAFLNDRIVGLAVGSRTIDGRLEDPSLSPKERGFLAVLAPAITGLDAGAPGSIFIGGQARFLAEQRHLDLLAIDALMESLEERYQLLALLRGALSRNQVYLRIGTELPDQSLVGLSMVAANYGVPRRNLGTVSLFGPTRMDYRLAMATVRGAAQILSRYVEGVYE 495
G +LN+R+ GL +G+R + RL+DPSL P E FL L PA L A ++++ G AR L R DL I+ L+ +LE R LL +LR AL + V +RIG+E +L LS+VAA YG+P+RNLGTVS+ GP RMDY +ATVR AA LSRYVE VYE
Sbjct: 172 GEYLNERLAGLGLGARMLHSRLQDPSLGPSEERFLQALIPAFGELGAMQEDTLYMDGAARLLGVDRLQDLAQINELLTALERRVTLLGVLRVALGQRDVLVRIGSENELPALRSLSVVAAGYGLPQRNLGTVSVIGPLRMDYAATIATVREAAHQLSRYVEDVYE 336 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54663.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54663.1.1 >prot_P-wetherbeei_contig54663.1.1 ID=prot_P-wetherbeei_contig54663.1.1|Name=mRNA_P-wetherbeei_contig54663.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp GAFLNDRIVGLAVGSRTIDGRLEDPSLSPKERGFLAVLAPAITGLDAGAPback to top mRNA from alignment at P-wetherbeei_contig54663:1..498+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54663.1.1 ID=mRNA_P-wetherbeei_contig54663.1.1|Name=mRNA_P-wetherbeei_contig54663.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig54663:1..498+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54663:1..498+ >mRNA_P-wetherbeei_contig54663.1.1 ID=mRNA_P-wetherbeei_contig54663.1.1|Name=mRNA_P-wetherbeei_contig54663.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig54663:1..498+ (Phaeothamnion wetherbeei SAG_119_79)back to top |