mRNA_P-wetherbeei_contig54640.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54640.2.1 vs. uniprot
Match: A0A2V3TSR0_9HYPH (Uncharacterized protein n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2V3TSR0_9HYPH) HSP 1 Score: 60.1 bits (144), Expect = 1.360e-7 Identity = 34/96 (35.42%), Postives = 63/96 (65.62%), Query Frame = 1
Query: 13 RRDMAGGGEIAMMAVITKAMGAFLVIMLFLLPYYTSNPVTEKMVEEATEQVEQVKREVQYAQIKLKTSKLSQEEIDELIRRLNIALALLDEALANI 300
RR + E+A+MAV+TKAMGAFL++M+F + YY + E++ + V++++ A ++K ++EE++EL R++++ALA L +A ++I
Sbjct: 4 RRHQSDTSEVALMAVMTKAMGAFLILMVFAMQYYIPDFTAEQIAAIVNRSISGVRQDLASAVERMKRGDFTKEELEELQRQIDVALAKLSQAESDI 99
BLAST of mRNA_P-wetherbeei_contig54640.2.1 vs. uniprot
Match: A0A2N3CPG0_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-2 TaxID=2013665 RepID=A0A2N3CPG0_9PROT) HSP 1 Score: 60.1 bits (144), Expect = 1.380e-7 Identity = 42/115 (36.52%), Postives = 65/115 (56.52%), Query Frame = 1
Query: 13 RRDMAGGGEIAMMAVITKAMGAFLVIMLFLLPYYTSNPVTEKMVEEATEQVEQVKREVQYAQIKLKTSKLSQEEIDELIRRLNIALALLDEALANIRLLKIENDQLASQVNRLTQ 357
RR GGEIA+MAV TKAMGAFL++M+F YY ++ + EE TE++ + + V+ A + + + ++EE+ ++ L A L A A + LK DQ S + RL +
Sbjct: 4 RRRHTDGGEIALMAVTTKAMGAFLILMIFGFKYYVADMEGAREAEELTERLAETREAVERAADRARRGEYTEEEMAAVLAALLEAEEALAAAEALVAQLKARLDQALSAIRRLEE 118
BLAST of mRNA_P-wetherbeei_contig54640.2.1 vs. uniprot
Match: A0A3S0YV75_HYPSQ (Uncharacterized protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A3S0YV75_HYPSQ) HSP 1 Score: 55.8 bits (133), Expect = 4.000e-6 Identity = 39/90 (43.33%), Postives = 57/90 (63.33%), Query Frame = 1
Query: 1 MRRVRR-DMAGGGEIAMMAVITKAMGAFLVIMLFLLPYYTSNPVTEKMVEEATEQVEQVK-------REVQYAQIKLKTSKLSQEEIDEL 246
M+R RR D + G EIAMMAVITKAMGAFLV+++ L+PYY N E + + E++++V+ + V+ A + +L+ EIDEL
Sbjct: 1 MKRPRRSDPSAGSEIAMMAVITKAMGAFLVLVVLLMPYYVVNINIEGLTKNVQEKMDKVQSQSSETLKNVKEALQRAGKGRLTDREIDEL 90
BLAST of mRNA_P-wetherbeei_contig54640.2.1 vs. uniprot
Match: A0A0J6UM14_9HYPH (Uncharacterized protein n=1 Tax=Methylobacterium aquaticum TaxID=270351 RepID=A0A0J6UM14_9HYPH) HSP 1 Score: 53.1 bits (126), Expect = 3.390e-5 Identity = 34/96 (35.42%), Postives = 60/96 (62.50%), Query Frame = 1
Query: 1 MRRVRRDMAGGGEIAMMAVITKAMGAFLVIMLFLLPYYTSNPVTEKMVEEATEQVEQVKREVQYAQIKLKTSKLSQEEIDELIRRLNIALALLDEA 288
M R RR EIA+MAV+TKAMGAFL++M+F + YY + E++ + V+ +++ A +LK+ ++E++D L ++++A+A L +A
Sbjct: 1 MMRRRRRQTETSEIALMAVMTKAMGAFLILMVFGMKYYVPDFTAEQVARIVHASLGSVRGDLEAAGRRLKSGDYTREDLDRLQAQIDVAVAKLAQA 96
BLAST of mRNA_P-wetherbeei_contig54640.2.1 vs. uniprot
Match: A0A345ZZG7_9HYPH (Uncharacterized protein n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A345ZZG7_9HYPH) HSP 1 Score: 52.4 bits (124), Expect = 6.210e-5 Identity = 31/96 (32.29%), Postives = 59/96 (61.46%), Query Frame = 1
Query: 13 RRDMAGGGEIAMMAVITKAMGAFLVIMLFLLPYYTSNPVTEKMVEEATEQVEQVKREVQYAQIKLKTSKLSQEEIDELIRRLNIALALLDEALANI 300
RR + E+A+MAV+TKAMGAFL++M+F + YY + E++ + V++E+ ++K +++++D L R++ ++LA L +A +I
Sbjct: 4 RRRQSDTSEVALMAVMTKAMGAFLILMVFAMQYYIPDFTAEQIAAIVNRSIGGVRQELAGVVDRMKKGDFTKQDLDALQRQIEVSLAKLAQAEGDI 99
BLAST of mRNA_P-wetherbeei_contig54640.2.1 vs. uniprot
Match: A0A160PCY7_9HYPH (M-like protein n=2 Tax=Bacteria TaxID=2 RepID=A0A160PCY7_9HYPH) HSP 1 Score: 52.0 bits (123), Expect = 8.510e-5 Identity = 35/96 (36.46%), Postives = 62/96 (64.58%), Query Frame = 1
Query: 1 MRRVRRDMAGGGEIAMMAVITKAMGAFLVIMLFLLPYYTSNPVTEKMVEEATEQVEQVKREVQYAQIKLKTSKLSQEEIDELIRRLNIALALLDEA 288
MRR RR A E+A+MAV+TKAMGAFL++M+F + YY + +E++ + V+ +++ + KLK+ ++E++D L +++ A+A L +A
Sbjct: 1 MRRRRRQ-AETSEVALMAVMTKAMGAFLILMVFGMKYYIPDFTSEQIAAIVRSSLGGVRTQLEASGRKLKSGDYTREDLDRLQEQIDAAVAKLAQA 95 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54640.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54640.2.1 >prot_P-wetherbeei_contig54640.2.1 ID=prot_P-wetherbeei_contig54640.2.1|Name=mRNA_P-wetherbeei_contig54640.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=158bp MRRVRRDMAGGGEIAMMAVITKAMGAFLVIMLFLLPYYTSNPVTEKMVEEback to top mRNA from alignment at P-wetherbeei_contig54640:37..510- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54640.2.1 ID=mRNA_P-wetherbeei_contig54640.2.1|Name=mRNA_P-wetherbeei_contig54640.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=474bp|location=Sequence derived from alignment at P-wetherbeei_contig54640:37..510- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54640:37..510- >mRNA_P-wetherbeei_contig54640.2.1 ID=mRNA_P-wetherbeei_contig54640.2.1|Name=mRNA_P-wetherbeei_contig54640.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=474bp|location=Sequence derived from alignment at P-wetherbeei_contig54640:37..510- (Phaeothamnion wetherbeei SAG_119_79)back to top |