mRNA_P-wetherbeei_contig54612.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54612.1.1 vs. uniprot
Match: D8LCC2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCC2_ECTSI) HSP 1 Score: 160 bits (406), Expect = 1.900e-43 Identity = 85/170 (50.00%), Postives = 108/170 (63.53%), Query Frame = 1
Query: 4 VVALAASGGVGLWIYNLYITNALISSWGLPLLEPWQALALFTWAANMFAVRQRGRLDGPRARSAAADNAAATSDVRFFTPAGWAFAIWGPIFLGEMLYIVFQCLP----GSAFWLADLAPFFAGAMAAQTLWCFAFRPWAVDSGRLWLPAALLTTGAACLGGAHRVLRAA 501
++ +AA G GL + L N L ++W + L++PWQ LA WA NM A GRLDG ++ T VRF +PAGWAFAIWGPIF GE +Y+ FQ +P ++WL+D++P+FAGAM Q LWCF+FRPWA DSG LWLPA LL LGG HR+LR A
Sbjct: 278 IIVIAALGSGGL--HALTTNNLLRAAWPITLVDPWQVLAASAWALNMRATFGGGRLDG-----IGQSGSSGTRPVRFLSPAGWAFAIWGPIFFGEAIYVAFQLMPLPSIRGSWWLSDISPWFAGAMLFQALWCFSFRPWARDSGLLWLPALLLGGTGVALGGVHRILREA 440
BLAST of mRNA_P-wetherbeei_contig54612.1.1 vs. uniprot
Match: D7FS55_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS55_ECTSI) HSP 1 Score: 149 bits (377), Expect = 1.280e-41 Identity = 85/172 (49.42%), Postives = 104/172 (60.47%), Query Frame = 1
Query: 1 TVVALAASGGVGLWIYNLYITNALISSWGLPLLEPWQALALFTWAANMFAVRQRGRLDGPRARSAAADNAAATSDVRFFTPAGWAFAIWGPIFLGEMLYIVFQCLP-----GSAFWLADLAPFFAGAMAAQTLWCFAFRPWAVDSGRLWLPAALLTTGAACLGGAHRVLRAA 501
T +A+A GG +Y + AL+S W LP ++PWQ L L +WA N AV GRLDGP A VR+F PAGWAF+IWGPIFLGE V+Q LP +A WL+ L+P+ + A Q+ WC +FR WA DSG LW PAALL AACLGGAH V+R A
Sbjct: 20 TALAIAGCGG----LYFAAESGALVS-WSLPYVKPWQVLTLTSWAINTAAVSAGGRLDGPEPED---PKDAKLPLVRYFMPAGWAFSIWGPIFLGEAALAVYQTLPLEGVSAAAGWLSKLSPWLSSAFLVQSCWCLSFREWARDSGLLWFPAALLGGTAACLGGAHHVVRGA 183
BLAST of mRNA_P-wetherbeei_contig54612.1.1 vs. uniprot
Match: A0A835Z9R9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9R9_9STRA) HSP 1 Score: 148 bits (374), Expect = 6.540e-41 Identity = 82/169 (48.52%), Postives = 104/169 (61.54%), Query Frame = 1
Query: 4 VVALAASGGVGLWIYNLYITNALISSWGLPLLEPWQALALFTWAANMFAVRQRGRLDGPRARSAAADNAAATSDVRFFTPAGWAFAIWGPIFLGEMLYIVFQCLP----GSAFWLADLAPFFAGAMAAQTLWCFAFRPWAVDSGR--LWLPAALLTTGAACLGGAHRVL 492
V L A+ + NL TNAL + W EPWQ L T+ N AVR GRLDG + AA + R+F PAGWAFAIW PIF GE+L++++Q LP +++WLA+L+P+F+GAM QTLWC AFRPWA +G W+PA LL GAA LGGAH +L
Sbjct: 4 VATLTAAAAIVAGCRNLKATNALTTPWNFRYAEPWQVLNAVTYLLNFAAVRVPGRLDGRQWSQDAA------TQQRYFAPAGWAFAIWAPIFAGELLFVIYQALPLARVRTSWWLAELSPYFSGAMLLQTLWCGAFRPWARAAGLNLQWIPALLLGLGAAALGGAHGIL 166
BLAST of mRNA_P-wetherbeei_contig54612.1.1 vs. uniprot
Match: A0A7S2UXB1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXB1_9STRA) HSP 1 Score: 140 bits (353), Expect = 1.090e-37 Identity = 82/151 (54.30%), Postives = 98/151 (64.90%), Query Frame = 1
Query: 49 NLYITNALISSWGLPLLEPWQALALFTWAANMFAVRQRGRLDGPRARSAAADNAAATSDVRFFTPAGWAFAIWGPIFLGEMLYIVFQCLPGSAF---WLADLAPFFAGAMAAQTLWCFAFRPWAVDSGRLWLPAALLTTGAACLGGAHRVL 492
N I NA IS W LP PWQ L + WA NM+AV GRLDG +A + + + ++RFFTPAGWAFAIWGPIFLGE L+ FQ LP ++ L ++ A+A Q+LWC AFRPWA SG LWLPAALLT A LGGAH+VL
Sbjct: 42 NEKIVNASIS-W-LPF-RPWQILNILAWALNMWAVSVPGRLDGSQAAALSDEG-----EIRFFTPAGWAFAIWGPIFLGEALFAFFQLLPIETVQTSFIPKLTVWWIPAVACQSLWCSAFRPWAKKSGFLWLPAALLTLTAVALGGAHKVL 184
BLAST of mRNA_P-wetherbeei_contig54612.1.1 vs. uniprot
Match: A0A7S3UYN9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYN9_HETAK) HSP 1 Score: 108 bits (271), Expect = 8.210e-27 Identity = 58/106 (54.72%), Postives = 70/106 (66.04%), Query Frame = 1
Query: 100 EPWQALALFTWAANMFAVRQRGRLDGPRARSAAADNAAATSDVRFFTPAGWAFAIWGPIFLGEMLYIVFQCLPGSAF--WLADLAPFFAGAMAAQTLWCFAFRPWA 411
+PWQ L F + M+AV GR+DG +A A D D+RFFTPAGWAFAIW PIFLGE L+ V+Q LPGSA +L L P++ AM Q+LWC AFRPWA
Sbjct: 88 KPWQLLNFFAFFGQMWAVSLPGRVDGEQA--APKDG----KDIRFFTPAGWAFAIWAPIFLGEALFAVYQALPGSAAKGFLPALTPYWLAAMGFQSLWCAAFRPWA 187
BLAST of mRNA_P-wetherbeei_contig54612.1.1 vs. uniprot
Match: A0A6V1K7Z9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1K7Z9_HETAK) HSP 1 Score: 103 bits (257), Expect = 3.470e-23 Identity = 55/133 (41.35%), Postives = 80/133 (60.15%), Query Frame = 1
Query: 106 WQALALFTWAANMFAVRQRGRLDGPRARSAAADNAAATSDVRFFTPAGWAFAIWGPIFLGEMLYIVFQCLPGSAF----WLADLAPFFAGAMAAQTLWCFAFRPWAVDSGRLWLPAALLTTGAACLGGAHRVL 492
WQ L F + N +A ++ GR+D + R+ A+ RFFTPAGWAF IW PIF+GE +++ +Q LP + +LA L+PF+ A+ Q++W F RPWAV++G W+ AALL L G H+V+
Sbjct: 98 WQVLNTFIFLFNRWAGKRPGRMDMKQPRAEASQK---KEVARFFTPAGWAFRIWIPIFIGETIFVFYQALPINYIKNKDFLAMLSPFWIAAIGFQSIWTFCARPWAVENGYGWIQAALLVLTGVALSGVHKVM 227
BLAST of mRNA_P-wetherbeei_contig54612.1.1 vs. uniprot
Match: A0A090N4T8_OSTTA (Unnamed product n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090N4T8_OSTTA) HSP 1 Score: 98.6 bits (244), Expect = 1.040e-21 Identity = 70/184 (38.04%), Postives = 90/184 (48.91%), Query Frame = 1
Query: 10 ALAASGGVGL---------WIYNLYITNALISSWGLPLLEPWQALALFTWAANMFAVRQRGRLDGPRARSAA----------ADNAAATSDVR-FFTPAGWAFAIWGPIFLGEMLYIVFQCLPGSAFWLADLAPFFAGAMAAQTLWCFAFRPWAVDSGRLWLPAALLTTGAACLGGAHRVLRAA 501
AL +G GL WI +L NA+ + +PW+ + + N+ +V GR+DG + AA A S+ R FTPAGWAFAIWG I+ GEM L G +A AP++A A Q+LWC AFRPWA W+ +ALL T A LGGA R LR A
Sbjct: 11 ALITAGAAGLVIGVAKIAPWITSL-TANAIAGA------QPWKVVVALAYGVNVASVSAPGRIDGEMQKRAAEAKRAKPEEKAHGVPLDSEFRSLFTPAGWAFAIWGVIYAGEMAMTAHALLGGDER-VAAAAPYWAVACGLQSLWCVAFRPWAKKPRHFWVSSALLITEAFALGGATRALRGA 186
BLAST of mRNA_P-wetherbeei_contig54612.1.1 vs. uniprot
Match: L1K151_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K151_GUITC) HSP 1 Score: 95.9 bits (237), Expect = 8.950e-21 Identity = 60/135 (44.44%), Postives = 75/135 (55.56%), Query Frame = 1
Query: 97 LEPWQALALFTWAANMFAVRQRGRLDGPRARSAAADNAAATSDVRFFTPAGWAFAIWGPIFLGEMLYIVFQCLPGS-----AFWLADLAPFFAGAMAAQTLWCFAFRPWAVDSGRLWLPAALLTTGAACLGGAHR 486
L+ WQ + +A A GRLD R +D+RFFTPAG+AFAIW PIFLGEML + +P S + WL +AP +A A AQ LWC AFRPWA+ W+PA+LLT A L +HR
Sbjct: 29 LQSWQLMISGGYALFFCANLIPGRLDTVLGRPK-------RTDLRFFTPAGFAFAIWAPIFLGEMLMMFSVLMPDSLRSPGSGWLEAMAPSYAAASVAQALWCLAFRPWALKYQ--WIPASLLTIAALALFESHR 154
BLAST of mRNA_P-wetherbeei_contig54612.1.1 vs. uniprot
Match: A0A7S0WI04_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WI04_9CHLO) HSP 1 Score: 95.9 bits (237), Expect = 1.710e-20 Identity = 57/136 (41.91%), Postives = 74/136 (54.41%), Query Frame = 1
Query: 97 LEPWQALALFTWAANMFAVRQRGRLDGPRARSAAADNAAATSDV--RFFTPAGWAFAIWGPIFLGEMLYIVFQCLPG--SAFWLADLAPFFAGAMAAQTLWCFAFRPWAVDSGRLWLPAALLTTGAACLGGAHRVL 492
L WQ + + N++AV GR+D A + N SD TP+GWAFAIWG I+L E ++ V Q LP WL D++P++ A Q+LWC AFR WA SG W+ AALLT A L GA V+
Sbjct: 72 LRVWQVVNAAAFCPNVWAVSSGGRIDSRYANT----NGVPPSDEYRSLVTPSGWAFAIWGVIYLTESIFTVVQLLPSMTDVTWLLDVSPWWVAANIYQSLWCAAFRDWARPSGVFWISAALLTATAIALAGAEAVV 203
BLAST of mRNA_P-wetherbeei_contig54612.1.1 vs. uniprot
Match: A0A1Y5IB82_OSTTA (Uncharacterized protein n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IB82_OSTTA) HSP 1 Score: 97.4 bits (241), Expect = 2.080e-20 Identity = 60/145 (41.38%), Postives = 76/145 (52.41%), Query Frame = 1
Query: 100 EPWQALALFTWAANMFAVRQRGRLDGPRARSAA----------ADNAAATSDVR-FFTPAGWAFAIWGPIFLGEMLYIVFQCLPGSAFWLADLAPFFAGAMAAQTLWCFAFRPWAVDSGRLWLPAALLTTGAACLGGAHRVLRAA 501
+PW+ + + N+ +V GR+DG + AA A S+ R FTPAGWAFAIWG I+ GEM L G +A AP++A A Q+LWC AFRPWA W+ +ALL T A LGGA R LR A
Sbjct: 340 QPWKVVVALAYGVNVASVSAPGRIDGEMQKRAAEAKRAKPEEKAHGVPLDSEFRSLFTPAGWAFAIWGVIYAGEMAMTAHALLGGDER-VAAAAPYWAVACGLQSLWCVAFRPWAKKPRHFWVSSALLITEAFALGGATRALRGA 483 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54612.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54612.1.1 >prot_P-wetherbeei_contig54612.1.1 ID=prot_P-wetherbeei_contig54612.1.1|Name=mRNA_P-wetherbeei_contig54612.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=167bp TVVALAASGGVGLWIYNLYITNALISSWGLPLLEPWQALALFTWAANMFAback to top mRNA from alignment at P-wetherbeei_contig54612:1..501- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54612.1.1 ID=mRNA_P-wetherbeei_contig54612.1.1|Name=mRNA_P-wetherbeei_contig54612.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig54612:1..501- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54612:1..501- >mRNA_P-wetherbeei_contig54612.1.1 ID=mRNA_P-wetherbeei_contig54612.1.1|Name=mRNA_P-wetherbeei_contig54612.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig54612:1..501- (Phaeothamnion wetherbeei SAG_119_79)back to top |