mRNA_P-wetherbeei_contig546.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig546.1.1 vs. uniprot
Match: D8LF40_ECTSI (Putative two-pore calcium channel (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF40_ECTSI) HSP 1 Score: 303 bits (776), Expect = 1.440e-82 Identity = 186/442 (42.08%), Postives = 251/442 (56.79%), Query Frame = 2
Query: 164 RRAKIRSMFRRRVLTVVAERTRDMDRRADLAAMFATDAIEGRLEHGLGKLSQSHPEVVWAFTLQTGHNWLTLLVACNVAHILFSLFEPPQAPLPFLGGGRGGADDVGATSAVPAALTAAFWLALRVAELFFCGVYLADAWLKVQYMGVADYLSKPWQQLYLGVALALTLDAASFGQLRVARALRPAICCLRVRSVRRFFTVVRDMAPGFVQVCVPLAFLILLSSSFAAMAFGSLVPELNSPGGAAYAIWILLASTDNYEDLLPPLVWGHGGYVAFFFLVLLVGNVFLLSLLLGVTFDVFIEHTAAQVKSERLKELKGLTVAFTTLDPEGTGKVPLVMWDKFLGRLRPALKPSERFLYYEIITGFLGEVDIISFMDLHQVLKYTVVG-----GQSKAAPQGMTLAARAFATAGKLAPLNCLW--RFVAAVVILDAALLPYLVP 1468
R+ K++ +F++ V VV ER +MD A +++ DA GRL+HG+ +S + AF LQ W+ ++A +VAH L EP GR D V L L L A F VY D LK YMG+ Y+ KPWQ+L + + L L +DA+ +R ARALRPAI +R R +RRF+ VV M PGF++VC+P+ F +LLS+S+AA++FG + P A YAIWIL+ DNYE L+ H YV F +V++VG++FLLSLLLGVT+DVFIEHT QV ER+KELKGL VAF T+DP GTGK+ +V+W++FL L P ER LY+EI + F +D++ FMDL QVL Y+ V Q K A+ A L W VAAVV+LD +LP+ +P
Sbjct: 69 RKQKLQRLFKQGVSRVVRERAEEMDLMAKKGSLYVMDAFAGRLQHGMAAMSTKPWYIFMAFRLQISAYWMWTIIASSVAHSLLVFLEPRP--------GRPPEDGV---------LGPGTLLGLEAA---FITVYALDVALKASYMGLKSYVKKPWQKLMVVIVLLLAIDASGVVGVRFARALRPAILSVRTRHIRRFYAVVSQMLPGFLRVCLPVVFFLLLSASYAALSFGRAKSDFEDPSTAGYAIWILMVCADNYEALVHDRST-HPAYVPFIVMVIVVGSMFLLSLLLGVTYDVFIEHTTEQVNQERMKELKGLNVAFATMDPTGTGKLSMVVWERFLLHLMPRTTQQERALYFEIASSFADNLDVLGFMDLRQVLSYSFVNVNAVERQGKRKKWEKMPPRVAWLLEKMEAVLATRWWKHTVAAVVLLDCFILPHSIP 489
BLAST of mRNA_P-wetherbeei_contig546.1.1 vs. uniprot
Match: A0A6H5KF87_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF87_9PHAE) HSP 1 Score: 289 bits (739), Expect = 9.040e-76 Identity = 167/389 (42.93%), Postives = 228/389 (58.61%), Query Frame = 2
Query: 164 RRAKIRSMFRRRVLTVVAERTRDMDRRADLAAMFATDAIEGRLEHGLGKLSQSHPEVVWAFTLQTGHNWLTLLVACNVAHILFSLFEPPQAPLPFLGGGRGGADDVGATSAVPAALTAAFWLALRVAELFFCGVYLADAWLKVQYMGVADYLSKPWQQLYLGVALALTLDAASFGQLRVARALRPAICCLRVRSVRRFFTVVRDMAPGFVQVCVPLAFLILLSSSFAAMAFGSLVPELNSPGGAAYAIWILLASTDNYEDLLPPLVWGHGGYVAFFFLVLLVGNVFLLSLLLGVTFDVFIEHTAAQVKS----ERLKELKGLTVAFTTLDPEGTGKVPLVMWDKFLGRLRPALKPSERFLYYEIITGFLGEVDIISFMDLHQVLKYTVV 1318
R+ K++ +F++ V VV +R +MD A +++ DA GRL+HG+ +S + AF LQ W+ ++A +VAH L EP GR D V L L L A F VY D LK YMG+ Y KPWQ+L + + L L +DA+ +R ARALRPAI +R R +RRF+ VV M PGF++VC+P+ F +LLS+S+AA++FG E P A YAIWIL+ DNYE L+ H YV F +V++VG++FLLSLLLGVT+DVFIEHT Q +S ER+KELKGL VAF T+DP GTGK+ +V+W++FL L P ER LY+EI + F +D++ FMDL Q + V+
Sbjct: 69 RKQKLQRLFKQGVSRVVRKRAEEMDLMAKKGSLYVMDAFAGRLQHGMAAMSTKPWYIFMAFRLQISAYWMWTIIASSVAHSLLVFLEPRP--------GRPPDDGV---------LGPGTLLGLEAA---FITVYALDVALKASYMGLKSYFKKPWQKLMVVIVLLLAVDASGVVGVRFARALRPAILSVRTRHIRRFYAVVSQMLPGFLRVCLPIVFFLLLSASYAALSFGRAKSEFEDPSTAGYAIWILMVCADNYEALVHDRST-HPAYVPFIVMVIVVGSMFLLSLLLGVTYDVFIEHTTEQARSTVNQERMKELKGLNVAFATMDPMGTGKMSMVVWERFLLHLMPRTTQQERALYFEIASNFADNLDVLGFMDLRQASWFAVL 436
BLAST of mRNA_P-wetherbeei_contig546.1.1 vs. uniprot
Match: A0A7S2XMD6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XMD6_9STRA) HSP 1 Score: 186 bits (471), Expect = 1.990e-46 Identity = 111/386 (28.76%), Postives = 197/386 (51.04%), Query Frame = 2
Query: 158 PERRAKIRSMFRRRVLTVVAERTRDMDRRADLAAMFATDAIEGRLEHGLGKLSQSHPEVVWAFTLQTGHNWLTLLVACNVAHILFSLFEPPQAPLPFLGGGRGGADDVGATSAVPAALTAAFWLALRVAELFFCGVYLADAWLKVQYMGVADYLSKPWQQLYLGVALALTLDAASFGQLRVARALRPAICCLRVRSVRRFFTVVRDMAPGFVQVCVPLAFLILLSSSFAAMAFGSLVPELNSPGGAAYAIWILLASTDNYEDLLPPLVWGHGGYVAFFFLVLLVGNVFLLSLLLGVTFDVFIEHTAAQVKSERLKELKGLTVAFTTLDPEGTGKVPLVMWDKFLGRLRPALKPSERFLYYEIITGFLGEVDIISFMDLHQVLKYTV 1315
PER +I + R+ + + R +++ +RA+ A + DA +GRL++GL S+ + F++QT + L ++ H L FEP A ++ + ++V+ + +Y+ D LK+ Y G+ +Y WQQ+Y+ V + +D G + LRPA+ LR R+ RRFF +++ M PG +PL F +++ + + F +PE + +Y L+ + DN+ +LP + + Y+ FFF V+ VG FLL+L++G T++ + Q+K ER+KE++GLT AF+ LD E +G + MW + L +L P + P LY+ +IT + +V ++ F+ L VL++ +
Sbjct: 8 PERWEEILRLLRKSIPDLARRRRKNVQQRAEYARLCILDAFQGRLKNGLASNSEKSKRIFTIFSIQTSASLLYTVIYACAFHTLSIFFEPENA-----------------------CSSSTIYYFMQVSVIL---IYIFDIALKMSYQGLKEYWGHSWQQVYVIVTALICMDLLVCGCTHYSNFLRPAVGILRARNGRRFFNILKKMVPGMSHSLIPLLFFLVMVMVVSTLLFDQQIPEFANSSYVSYNWVFLIFTNDNFNRVLPGHMRMNICYLVFFFPVVYVGQQFLLNLIVGETYETYKSFVKKQLKKERIKEMQGLTKAFSALDEEKSGLISFHMWRECLIKLDPDISPEAIALYFALITDGVNQVSVLQFLSLRSVLRFNL 367
BLAST of mRNA_P-wetherbeei_contig546.1.1 vs. uniprot
Match: A0A7S3M3M3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M3M3_9STRA) HSP 1 Score: 154 bits (389), Expect = 2.620e-34 Identity = 82/242 (33.88%), Postives = 135/242 (55.79%), Query Frame = 2
Query: 590 VQYMGVADYLSKPWQQLYLGVALALTLDAASFGQLRVARALRPAICCLRVRSVRRFFTVVRDMAPGFVQVCVPLAFLILLSSSFAAMAFGSLVPELNSPGGAAYAIWILLASTDNYEDLLPPLVWGHGGYVAFFFLVLLVGNVFLLSLLLGVTFDVFIEHTAAQVKSERLKELKGLTVAFTTLDPEGTGKVPLVMWDKFLGRLRPALKPSERFLYYEIITGFLGEVDIISFMDLHQVLKYTV 1315
+ Y G+ +Y S WQQLY VA+ LD F + LRP + LR R RRFF V++ M PG VPL F I++ +A+ F + +L +P +Y + L+ + DN++ +LP V + Y+ FFF + VG FLLSL++G T++ + Q+K ERLKE++GLT AF++LD + G + + W + L + P++ LY+E+++G + ++ F+ + VL + +
Sbjct: 1 MSYEGIEEYFSHDWQQLYFIVAILSALDLFFFRCTYLTNPLRPVVGVLRARKGRRFFEVLKKMMPGMTHSLVPLLFFIVIVMVLSALMFDGTIQDLANPMFTSYNWFFLIFTNDNFDRILPDEVMMNMSYLLFFFPCIYVGQQFLLSLIIGDTYETYKAFVKKQLKKERLKEMQGLTKAFSSLDDQKHGVISALQWKECLNKYDPSIPDEAVALYFELLSGGNSVIGVLQFLSMRSVLNFNL 242
BLAST of mRNA_P-wetherbeei_contig546.1.1 vs. uniprot
Match: A0A482T0I9_9ARCH (Ion transporter n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T0I9_9ARCH) HSP 1 Score: 120 bits (301), Expect = 2.410e-24 Identity = 65/194 (33.51%), Postives = 112/194 (57.73%), Query Frame = 2
Query: 731 LRVRSVRRFFTVVRDMAPGFVQVCVPLAFLILLSSSFAAMAFGSLVPELNSPGGAAYAIWILLASTDNYEDLLPPLVWGHGGYVAFFFLVLLVGNVFLLSLLLGVTFDVFIEHTAAQVKSERLKELKGLTVAFTTLDPEGTGKVPLVMWDKFLGRLRPALKPSERFLYYEIITGF-LGEVDIISFMDLHQVLKY 1309
LR R R+FF V++ M PG + VP+ F +L+ ++++F +L+ E S +Y L+ + DN++ LLP + + Y+ FFF + VG FLLSL++G T++ F + Q+K E+LKE++GLT AF LD G + ++ + + L P + LYYE+++G + V+++ F+ L +VL +
Sbjct: 5 LRARRGRKFFEVLKKMVPGMMHSLVPIVFFVLIIMGMSSLSFDNLIEEFKSTAYTSYNWLFLIFTNDNFDRLLPGSIMVNMSYLLFFFPAIYVGQRFLLSLIIGDTYETFRSYVKKQLKKEKLKEMQGLTKAFAALDDRKCGVISDFVFKECMTCLHPGMSDEVIALYYELLSGGGVNGVNVLQFLSLRKVLSF 198
BLAST of mRNA_P-wetherbeei_contig546.1.1 vs. uniprot
Match: L1J300_GUITC (EF-hand domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J300_GUITC) HSP 1 Score: 96.3 bits (238), Expect = 1.800e-16 Identity = 88/324 (27.16%), Postives = 139/324 (42.90%), Query Frame = 2
Query: 272 DAIEGRLEHGLGKLSQSHPEVVWAFTLQTGHNWLTLLVACNVAHILFSLFEPPQAPLPFLGGGRGGADDVGATSAVPAALTAAFWLALRVAELFFCGVYLADAWLKVQYMGVADYLSKPWQQLYLGVALALTLDAASFGQ----LRVARALRPAICCLRVRSVRRFFTVVRDMAPGFVQVC-VPLAFLILLSSSFAAMAFGSLVPELNSPGGA--------AYAIWILLASTDNYEDLLPPLVWGHGGYVAFFFLVLLVGNVFLLSLLLGVTFDVFIEHTAAQVKSERLKELKGLTVAFTTLDPEGTGKVPLVMWDKFLGRLRP 1204
DA EGR HGL L + F + T W+ +++ ++ H ++EPP +L D +P + + + VA++ F +Y D KV G DY+SK WQ+ Y+ + +D + R AR R + R R VRR + M V V +PL ++ S +G L E + G A LL++ DN++ ++ H FF ++ + FL+S+ LGV FD+++E VK+E KE K + AF LD E GK+ + + + L LRP
Sbjct: 36 DAYEGRASHGLYSLLKGPAYKRALFIIHTHPMWMNVVIWASIIHASLIIWEPPNRLSSWL-------DPT--LDPIPIIILEVLCMGVFVADIVFKMLYFGDE--KVS--GWQDYISKEWQRNYMTIIFLFHVDFVLYHTKLCPFRFARPFRLTVLAARHRDVRRLISFFPTMCVKLVTVFFLPLLGVLAFFSILCVRIYGRLPAEHSLDLGEDSFSSVMPAIRTLFLLSTIDNFDPVVTEAYKQHPVSFFFFLAFIVFASFFLMSVALGVMFDLYLEDHEKTVKAEAKKEEKSMAKAFQKLDVEEQGKIKWLHFREMLVHLRP 346
BLAST of mRNA_P-wetherbeei_contig546.1.1 vs. uniprot
Match: A0A7S0F1K7_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F1K7_9CRYP) HSP 1 Score: 82.8 bits (203), Expect = 5.810e-13 Identity = 81/299 (27.09%), Postives = 126/299 (42.14%), Query Frame = 2
Query: 272 DAIEGRLEHGLGKLSQSHPEVVWAFTLQTGHNWLTLLVACNVAHILFSLFEPPQAPLPFLGGGRGGADDVGATSAVPAALTAAFWLALRVAELFFCGVYLADAWLKVQYMGVADYLSKPWQQLYLGVALALTLDA----ASFGQLRVARALRPAICCLRVRSVRRFFTVVRDMAPGFVQVC-VPLAFLILLSSSFAAMAFGSLVPELNSPGGA--------AYAIWILLASTDNYEDLLPPLVWGHGGYVAFFFLVLLVGNVFLLSLLLGVTFDVFIEHTAAQVKSERLKELKGLTVAF 1129
DA EGR HGL L + F + T W+ +++ ++ H ++EPP +L D +P L + + VA++ F +Y D KV G DY+SK WQ+ Y+ + +D A R AR R + R R VRR + M V V +PL ++ S +G L E + G A LL++ DN++ ++ H FF ++ + FL+S+ LGV FD+++E VK+E KE K + AF
Sbjct: 57 DAYEGRASHGLYSLLKGPAYKRALFIIHTHPMWMNVVIWASIIHASLIIWEPPNRLSSWL-------DPT--LDPLPVILLEVACMGVFVADIVFKMLYFGDE--KVS--GWQDYISKEWQRNYMTIIFLFQVDFVLYHAKICPFRFARPFRLTVLAARHRDVRRLISFFPTMCVKLVTVFFLPLLGVLAFFSILCVRIYGRLPQEHSLDLGEDSFSSVLPAIRTLFLLSTIDNFDPVVTEAYKQHPISFFFFLAFIVFASFFLMSVALGVMFDLYLEDHEKTVKAEAKKEEKSVAKAF 342
BLAST of mRNA_P-wetherbeei_contig546.1.1 vs. uniprot
Match: A0A7Y8INS6_9BACT (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Thermoanaerobaculaceae bacterium TaxID=2699758 RepID=A0A7Y8INS6_9BACT) HSP 1 Score: 60.1 bits (144), Expect = 1.310e-5 Identity = 42/124 (33.87%), Postives = 63/124 (50.81%), Query Frame = 1
Query: 2932 PPPAPKPLSRRASLDAL--GYNLNALKKQASEDVSADVVRFADGEVIVKRGQTYGHCFMVQAGTVHIINRDGDEEEVV----GPGNLFGELAVLAHLPQPHNVVAMGEVSVVMVEREKLVEMIA 3285
P +P+ L R A + L AL++ S S V F+ GE+IV+ G F+++AGTV + D EVV GPG FGE+AVL P+ +VA V+++ + E L ++A
Sbjct: 170 PEASPQQLQREREASAFFSAFPLEALEELLS---STSVRSFSPGEIIVREGDPGVSLFLIEAGTVEVRTNDPAGREVVLAQLGPGEFFGEVAVLTGRPRTATIVACEAVTLIEILAEDLERIVA 290
BLAST of mRNA_P-wetherbeei_contig546.1.1 vs. uniprot
Match: A8TNM5_9PROT (CheY-like receiver n=1 Tax=alpha proteobacterium BAL199 TaxID=331869 RepID=A8TNM5_9PROT) HSP 1 Score: 55.1 bits (131), Expect = 2.890e-5 Identity = 29/90 (32.22%), Postives = 49/90 (54.44%), Query Frame = 1
Query: 3046 FADGEVIVKRGQTYGHCFMVQAGTVHIINRDGDEEEVV---GPGNLFGELAVLAHLPQPHNVVAMGEVSVVMVEREKLVEMIASQSPSLR 3306
F GE+IV+ GQ F+++AG V + + GD + VV G G +FGE+A++ H+P V ++ +++ R + MI P L+
Sbjct: 8 FDPGEIIVEPGQPCVGAFLIEAGKVEVFRKSGDRKVVVAVLGKGEIFGEMALIDHVPHARYVRSVESTQCLLISRTQYEAMIEQTPPILK 97
BLAST of mRNA_P-wetherbeei_contig546.1.1 vs. uniprot
Match: A0A2U1W267_9PROT (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Azospirillum sp. TSO22-1 TaxID=716789 RepID=A0A2U1W267_9PROT) HSP 1 Score: 55.1 bits (131), Expect = 4.750e-5 Identity = 33/102 (32.35%), Postives = 55/102 (53.92%), Query Frame = 1
Query: 3001 LKKQASEDVSADVVRFADGEVIVKRGQTYGHCFMVQAGTVHIINRDGDEEEVVGPGNLFGELAVLAHLPQPHNVVAMGEVSVVMVEREKLVEMIASQSPSLR 3306
++ + S D D ++DG V ++ + +++Q G V I RD E V+GPG +FGELA+L P+ VA+G+ + ++ RE I++ P LR
Sbjct: 1 MRSRRSFDRVLDRRGYSDGHVFFRQDDSATVAYLIQFGQVSI-RRDDAELAVLGPGRIFGELALLRAQPRVATAVAVGQTTCEVIRREDFKHAISAMPPILR 101 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig546.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig546.1.1 >prot_P-wetherbeei_contig546.1.1 ID=prot_P-wetherbeei_contig546.1.1|Name=mRNA_P-wetherbeei_contig546.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=655bp MGGIRERSGRNRPVEKENLQCVKRRTMHHSASKMEHGRHIPMPAMPSIVRback to top mRNA from alignment at P-wetherbeei_contig546:293..8359+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig546.1.1 ID=mRNA_P-wetherbeei_contig546.1.1|Name=mRNA_P-wetherbeei_contig546.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=8067bp|location=Sequence derived from alignment at P-wetherbeei_contig546:293..8359+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig546:293..8359+ >mRNA_P-wetherbeei_contig546.1.1 ID=mRNA_P-wetherbeei_contig546.1.1|Name=mRNA_P-wetherbeei_contig546.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1965bp|location=Sequence derived from alignment at P-wetherbeei_contig546:293..8359+ (Phaeothamnion wetherbeei SAG_119_79)back to top |