mRNA_P-wetherbeei_contig54573.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54573.1.1 vs. uniprot
Match: A0A6N7GPG9_9HYPH (Histidine kinase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GPG9_9HYPH) HSP 1 Score: 145 bits (367), Expect = 6.770e-38 Identity = 82/168 (48.81%), Postives = 113/168 (67.26%), Query Frame = 1
Query: 13 RDILILVAAGLVGALAEATQLWLLLLATRHFHLADIGSTSLPLIVGDVIGIAVVTPLVLRLVTRLERMPILATAALG-ELLLLLIAILLILYVVVRPPGPLGQSLFYLLFMPVVIAAVRHGIDGACAALAISQIGLVAFLHWHGFELSRFTEYQVLMLVLTLTGLIVG 513
RD+ +L+A G GAL A L LLL+A AD+ S+PL+VGDVIGIAV+TPLVLR + + + + A E+ L + +LL ++ + G LFYL F+PVV+AAVR+G+DGAC LA++Q+GL+ LHWHG++ + FTE+Q+LMLVLT TGL VG
Sbjct: 140 RDVFLLLAGGTAGALLVALFLSLLLIADEKLSPADLFVVSVPLLVGDVIGIAVMTPLVLRFILHIPHISLQTLRAFAPEVALYVAVVLLFVWFIGLTESESGFKLFYLFFLPVVVAAVRYGLDGACLGLALTQLGLLGLLHWHGYDANVFTEFQILMLVLTATGLTVG 307
BLAST of mRNA_P-wetherbeei_contig54573.1.1 vs. uniprot
Match: A0A327KT25_9HYPH (Histidine kinase n=1 Tax=Rhodoplanes roseus TaxID=29409 RepID=A0A327KT25_9HYPH) HSP 1 Score: 142 bits (358), Expect = 1.140e-36 Identity = 90/172 (52.33%), Postives = 111/172 (64.53%), Query Frame = 1
Query: 7 RTRDILILVAAGLVGALAEATQLWLLLLATRHFHLADIGSTSLPLIVGDVIGIAVVTPLVLRLVTRL---ERMPILATAALGELLLLLIAILLILYVVVRPPGPLGQSLFYLLFMPVVIAAVRHGIDGACAALAISQIGLVAFLHWHGFELSRFTEYQVLMLVLTLTGLIVG 513
R RD+L+L+AAG GA A L LL+A D+ + ++PL+VGDVIGIAV+TPLVLRL ER A A + E + I L++V PGP G F+LL +PVV AAVRHG+DGAC ALA Q+GLVA LH HG ++ FTEYQ LMLVLT TGL+VG
Sbjct: 126 RLRDVLMLLAAGFAGACLVAVLLTTLLIAFGDLGSRDVLAATVPLLVGDVIGIAVITPLVLRLAAAWRSGERG--FAPALVAEAAAHAVVIGACLWLVTATPGPEGFKYFHLLALPVVTAAVRHGLDGACLALAAVQLGLVALLHLHGHDMRAFTEYQALMLVLTATGLVVG 295
BLAST of mRNA_P-wetherbeei_contig54573.1.1 vs. uniprot
Match: A0A6N6T044_9HYPH (Histidine kinase n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6T044_9HYPH) HSP 1 Score: 141 bits (355), Expect = 2.580e-36 Identity = 85/172 (49.42%), Postives = 116/172 (67.44%), Query Frame = 1
Query: 1 LLRTRDILILVAAGLVGALAEATQLWLLLLATRHFHLADIGSTSLPLIVGDVIGIAVVTPLVLRLVTRLERMPILATAA-LGELLLLLIAILLILYVVVRPPGPLGQSLFYLLFMPVVIAAVRHGIDGACAALAISQIGLVAFLHWHGFELSRFTEYQVLMLVLTLTGLIVG 513
L RD+L+L+A G GA A A L +LLLA ++D+ +SLPL+VGD IGIAV+TPL+LR R + A A L E++L ++A L++++ P LLF+PVV AAVRHGIDG+C ALA +Q+GLVA LH + ++ + FTE+QV+MLVLTLTGL+VG
Sbjct: 111 LTHVRDVLVLMATGAAGAAASAVLLTVLLLAADELKVSDLAQSSLPLLVGDAIGIAVMTPLLLRASLRWHDITRKALAPFLPEIMLYVLATSFALWMIIGSDSPNYYKYLSLLFLPVVAAAVRHGIDGSCLALAATQLGLVALLHRYKYDAAAFTEFQVVMLVLTLTGLLVG 282
BLAST of mRNA_P-wetherbeei_contig54573.1.1 vs. uniprot
Match: A0A327KC03_9HYPH (Histidine kinase n=1 Tax=Rhodoplanes elegans TaxID=29408 RepID=A0A327KC03_9HYPH) HSP 1 Score: 141 bits (355), Expect = 3.500e-36 Identity = 88/172 (51.16%), Postives = 111/172 (64.53%), Query Frame = 1
Query: 13 RDILILVAAGLVGALAEATQLWLLLLATRHFHLADIGSTSLPLIVGDVIGIAVVTPLVLRLVT-----RLERMPILATAALGELLLLLIAILLILYVVVRPPGPLGQSLFYLLFMPVVIAAVRHGIDGACAALAISQIGLVAFLHWHGFELSRFTEYQVLMLVLTLTGLIVG 513
RD+L+L+AAGL GA A L +LL+ L D+ + ++PL+VGDVIGIAV+TPLVLRL L P LA + ++ L++V PGP G F+LL +PVV AAVRHG+DGAC ALA Q+GLVA LH HG ++ FTEYQ LMLVLT TGL+VG
Sbjct: 132 RDVLLLLAAGLAGACVVALLLTVLLIVFGDLGLRDVLAATVPLLVGDVIGIAVITPLVLRLAAAWRAGELTFAPALALEGMSTAAVIGAC----LWLVTASPGPEGFKYFHLLALPVVTAAVRHGLDGACLALAGVQLGLVALLHLHGHDIRVFTEYQALMLVLTATGLVVG 299
BLAST of mRNA_P-wetherbeei_contig54573.1.1 vs. uniprot
Match: A0A537TYF1_9PROT (MASE1 domain-containing protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537TYF1_9PROT) HSP 1 Score: 137 bits (346), Expect = 9.600e-36 Identity = 82/167 (49.10%), Postives = 108/167 (64.67%), Query Frame = 1
Query: 16 DILILVAAGLVGALAEATQLWLLLLATRHFHLADIGSTSLPLIVGDVIGIAVVTPLVLRLVTRLERMPILATAAL-GELLLLLIAILLILYVVVRPPGPLGQSLFYLLFMPVVIAAVRHGIDGACAALAISQIGLVAFLHWHGFELSRFTEYQVLMLVLTLTGLIVG 513
D+L+L+ AG+ GA+ A L +LLL DI T +PL+VGD IGIAV+TPL LRL+ P+ + L E+LL ++ I + L+V++ G FYLLF+PVV+AAVRHG+DGAC +LA SQI LV LH H ++ FTE+Q LM LT TGLIVG
Sbjct: 157 DVLVLLFAGISGAVIVALMLSMLLLTNAEIDFGDIFVTFVPLLVGDAIGIAVMTPLTLRLILNSGGSPLRFSRTLVPEILLYVLFITVALWVIIGAETVNGFKFFYLLFLPVVVAAVRHGLDGACVSLAFSQIALVGVLHIHSYDARAFTEFQTLMFALTATGLIVG 323
BLAST of mRNA_P-wetherbeei_contig54573.1.1 vs. uniprot
Match: A0A537VHZ4_9PROT (MASE1 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537VHZ4_9PROT) HSP 1 Score: 137 bits (346), Expect = 4.960e-35 Identity = 78/167 (46.71%), Postives = 107/167 (64.07%), Query Frame = 1
Query: 16 DILILVAAGLVGALAEATQLWLLLLATRHFHLADIGSTSLPLIVGDVIGIAVVTPLVLRLVTRLERMPILATAALG-ELLLLLIAILLILYVVVRPPGPLGQSLFYLLFMPVVIAAVRHGIDGACAALAISQIGLVAFLHWHGFELSRFTEYQVLMLVLTLTGLIVG 513
D+ IL+ AG+ GA+ A L +LLL D+ T PL++GD IGIAV+TPL LRL+ R PI + L E+L ++ + + L++++ G FYLLF+PVV+AAVRHG+DGAC +L +SQI LV H H ++ FTE+Q LML+LT TGLIVG
Sbjct: 138 DVFILLFAGISGAILVALMLSILLLTDAEIDFGDVIVTFAPLLIGDAIGIAVMTPLTLRLILNPRRSPIRFSRTLVLEILFYVLLVTVTLWIIIGTQSANGFKFFYLLFVPVVVAAVRHGLDGACVSLGLSQIALVGIAHIHSYDAQAFTEFQTLMLILTATGLIVG 304
BLAST of mRNA_P-wetherbeei_contig54573.1.1 vs. uniprot
Match: A0A1Q7BQ88_9PROT (Histidine kinase n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7BQ88_9PROT) HSP 1 Score: 137 bits (346), Expect = 5.210e-35 Identity = 78/167 (46.71%), Postives = 107/167 (64.07%), Query Frame = 1
Query: 16 DILILVAAGLVGALAEATQLWLLLLATRHFHLADIGSTSLPLIVGDVIGIAVVTPLVLRLVTRLERMPILATAALG-ELLLLLIAILLILYVVVRPPGPLGQSLFYLLFMPVVIAAVRHGIDGACAALAISQIGLVAFLHWHGFELSRFTEYQVLMLVLTLTGLIVG 513
D+ IL+ AG+ GA+ A L +LLL D+ T PL++GD IGIAV+TPL LRL+ R PI + L E+L ++ + + L++++ G FYLLF+PVV+AAVRHG+DGAC +L +SQI LV H H ++ FTE+Q LML+LT TGLIVG
Sbjct: 119 DVFILLFAGISGAILVALMLSILLLTDAEIDFGDVIVTFAPLLIGDAIGIAVMTPLTLRLILNPRRSPIRFSRTLVLEILFYVLLVTVTLWIIIGTQSANGFKFFYLLFVPVVVAAVRHGLDGACVSLGLSQIALVGIAHIHSYDAQAFTEFQTLMLILTATGLIVG 285
BLAST of mRNA_P-wetherbeei_contig54573.1.1 vs. uniprot
Match: A0A537U1V6_9PROT (Histidine kinase n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537U1V6_9PROT) HSP 1 Score: 137 bits (346), Expect = 7.230e-35 Identity = 82/167 (49.10%), Postives = 108/167 (64.67%), Query Frame = 1
Query: 16 DILILVAAGLVGALAEATQLWLLLLATRHFHLADIGSTSLPLIVGDVIGIAVVTPLVLRLVTRLERMPILATAAL-GELLLLLIAILLILYVVVRPPGPLGQSLFYLLFMPVVIAAVRHGIDGACAALAISQIGLVAFLHWHGFELSRFTEYQVLMLVLTLTGLIVG 513
D+L+L+ AG+ GA+ A L +LLL DI T +PL+VGD IGIAV+TPL LRL+ P+ + L E+LL ++ I + L+V++ G FYLLF+PVV+AAVRHG+DGAC +LA SQI LV LH H ++ FTE+Q LM LT TGLIVG
Sbjct: 157 DVLVLLFAGISGAVIVALMLSMLLLTNAEIDFGDIFVTFVPLLVGDAIGIAVMTPLTLRLILNSGGSPLRFSRTLVPEILLYVLFITVALWVIIGAETVNGFKFFYLLFLPVVVAAVRHGLDGACVSLAFSQIALVGVLHIHSYDARAFTEFQTLMFALTATGLIVG 323
BLAST of mRNA_P-wetherbeei_contig54573.1.1 vs. uniprot
Match: A0A327K6G5_9HYPH (HisKA domain-containing protein (Fragment) n=1 Tax=Rhodoplanes piscinae TaxID=444923 RepID=A0A327K6G5_9HYPH) HSP 1 Score: 135 bits (340), Expect = 1.370e-34 Identity = 87/177 (49.15%), Postives = 112/177 (63.28%), Query Frame = 1
Query: 1 LLRTRDILILVAAGLVGALAEATQLWLLLLATRHFHLADIGSTSLPLIVGDVIGIAVVTPLVLRLVTRLER------MPILATAALGELLLLLIAILLILYVVVRPPGPLGQSLFYLLFMPVVIAAVRHGIDGACAALAISQIGLVAFLHWHGFELSRFTEYQVLMLVLTLTGLIVG 513
L R RD+L+L+ AGL GA A L LLL+ + D+ +T++PL+VGDV+GIAV+TPL LRLV + ++A AA G L+ I L++V P G F+LL +PVV AAVRHG+DGAC ALA Q+GLVA LH HG ++ FTEYQ LM VLT TGL+ G
Sbjct: 131 LARLRDVLLLLGAGLAGAALVALLLTLLLIGFGELGVQDVLATTVPLLVGDVLGIAVITPLTLRLVAARRKGGSAFGAGVVAEAAAGALV-----IAACLWLVAASGRPDGFKYFHLLALPVVAAAVRHGLDGACLALAGVQLGLVALLHLHGHDVRAFTEYQALMGVLTATGLVAG 302
BLAST of mRNA_P-wetherbeei_contig54573.1.1 vs. uniprot
Match: A0A447CY61_9HYPH (Histidine kinase n=2 Tax=Rhodoplanes piscinae TaxID=444923 RepID=A0A447CY61_9HYPH) HSP 1 Score: 135 bits (340), Expect = 4.840e-34 Identity = 87/177 (49.15%), Postives = 112/177 (63.28%), Query Frame = 1
Query: 1 LLRTRDILILVAAGLVGALAEATQLWLLLLATRHFHLADIGSTSLPLIVGDVIGIAVVTPLVLRLVTRLER------MPILATAALGELLLLLIAILLILYVVVRPPGPLGQSLFYLLFMPVVIAAVRHGIDGACAALAISQIGLVAFLHWHGFELSRFTEYQVLMLVLTLTGLIVG 513
L R RD+L+L+ AGL GA A L LLL+ + D+ +T++PL+VGDV+GIAV+TPL LRLV + ++A AA G L+ I L++V P G F+LL +PVV AAVRHG+DGAC ALA Q+GLVA LH HG ++ FTEYQ LM VLT TGL+ G
Sbjct: 131 LARLRDVLLLLGAGLAGAALVALLLTLLLIGFGELGVQDVLATTVPLLVGDVLGIAVITPLTLRLVAARRKGGLAFGAGVVAEAAAGALV-----IAACLWLVAASGRPDGFKYFHLLALPVVAAAVRHGLDGACLALAGVQLGLVALLHLHGHDVRAFTEYQALMGVLTATGLVAG 302 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54573.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54573.1.1 >prot_P-wetherbeei_contig54573.1.1 ID=prot_P-wetherbeei_contig54573.1.1|Name=mRNA_P-wetherbeei_contig54573.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=171bp LLRTRDILILVAAGLVGALAEATQLWLLLLATRHFHLADIGSTSLPLIVGback to top mRNA from alignment at P-wetherbeei_contig54573:11..523+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54573.1.1 ID=mRNA_P-wetherbeei_contig54573.1.1|Name=mRNA_P-wetherbeei_contig54573.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig54573:11..523+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54573:11..523+ >mRNA_P-wetherbeei_contig54573.1.1 ID=mRNA_P-wetherbeei_contig54573.1.1|Name=mRNA_P-wetherbeei_contig54573.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig54573:11..523+ (Phaeothamnion wetherbeei SAG_119_79)back to top |