mRNA_P-wetherbeei_contig54482.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54482.2.1 vs. uniprot
Match: A0A515KT28_9BRAD (Type II toxin-antitoxin system RelE/ParE family toxin n=1 Tax=Tardiphaga sp. vice352 TaxID=2592816 RepID=A0A515KT28_9BRAD) HSP 1 Score: 67.8 bits (164), Expect = 9.850e-13 Identity = 36/93 (38.71%), Postives = 56/93 (60.22%), Query Frame = 1
Query: 1 VKRRFTRTASAELDQAVEYLIQHAPLAAGDFADSIDAAVAELIENPYSAQETELKGIRRKYVRRFRYALFYTIDEEKDELLIVSVRHAARRWP 279
VK R++ TA EL+Q ++ + +P +A A I L E P+S +E+++ G+RR +V + Y + Y I + DE+LIVSVRH AR+ P
Sbjct: 4 VKLRWSDTARRELEQIFAFVRERSPASARSVAQRILHRARFLREFPFSGKESQVAGVRRLFVVNYPYVILYEIHQSDDEVLIVSVRHTARKQP 96
BLAST of mRNA_P-wetherbeei_contig54482.2.1 vs. uniprot
Match: UPI001EE2CB8E (type II toxin-antitoxin system RelE/ParE family toxin n=1 Tax=Methylobacterium organophilum TaxID=410 RepID=UPI001EE2CB8E) HSP 1 Score: 67.0 bits (162), Expect = 1.620e-12 Identity = 34/91 (37.36%), Postives = 55/91 (60.44%), Query Frame = 1
Query: 1 VKRRFTRTASAELDQAVEYLIQHAPLAAGDFADSIDAAVAELIENPYSAQETELKGIRRKYVRRFRYALFYTIDEEKDELLIVSVRHAARR 273
+K R TR A+ +LD+ + Y+ QH P A D + A + L+++P++ T +GIRR V + YA+ Y++ DE++I+ VRH ARR
Sbjct: 1 MKLRLTRPAAQQLDKVLIYIAQHNPSGARKVQDRVQATMQMLVDHPFAGHATARRGIRRMIVTPYPYAITYSLGA--DEVIILGVRHTARR 89
BLAST of mRNA_P-wetherbeei_contig54482.2.1 vs. uniprot
Match: C0QCM4_DESAH (Uncharacterized protein n=1 Tax=Desulforapulum autotrophicum (strain ATCC 43914 / DSM 3382 / VKM B-1955 / HRM2) TaxID=177437 RepID=C0QCM4_DESAH) HSP 1 Score: 62.4 bits (150), Expect = 1.160e-10 Identity = 36/91 (39.56%), Postives = 55/91 (60.44%), Query Frame = 1
Query: 1 VKRRFTRTASAELDQAVEYLIQHAPLAAGDFADSIDAAVAELIENPYSAQETELKGIRRKYVRRFRYALFYTIDEEKDELLIVSVRHAARR 273
+K RF A AE+ +A Y +F D I+AAVAE+IENP + + EL GI+R+ VRRF Y++ Y + E DE++I ++ H ++
Sbjct: 1 MKLRFLEPAEAEMMEAAAYYEVQVERLGTNFLDIIEAAVAEIIENPGTWPKNEL-GIQRRLVRRFPYSILYAVHE--DEVIITAIMHQKQK 88
BLAST of mRNA_P-wetherbeei_contig54482.2.1 vs. uniprot
Match: A0A5C5SEZ4_9HYPH (Type II toxin-antitoxin system RelE/ParE family toxin n=2 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5SEZ4_9HYPH) HSP 1 Score: 60.5 bits (145), Expect = 9.170e-10 Identity = 35/90 (38.89%), Postives = 51/90 (56.67%), Query Frame = 1
Query: 1 VKRRFTRTASAELDQAVEYLIQHAPLAAGDFADSIDAAVAELIENPYSAQETELKGIRRKYVRRFRYALFYTIDEEKDELLIVSVRHAAR 270
VK R+T A A+L+Q Y+ P AAG A I ++ L PY + T L +R V R+ Y +FYTID+ K E++I+ + H+AR
Sbjct: 17 VKVRYTTQALAQLEQIHAYITHRNPKAAGIVARRITRSIELLAAFPYMYRRTSLPHVRVLPVIRYPYLVFYTIDDAKQEVVILRIVHSAR 106
BLAST of mRNA_P-wetherbeei_contig54482.2.1 vs. uniprot
Match: A0A418VI90_RHOPL (Type II toxin-antitoxin system RelE/ParE family toxin n=1 Tax=Rhodopseudomonas palustris TaxID=1076 RepID=A0A418VI90_RHOPL) HSP 1 Score: 60.1 bits (144), Expect = 9.550e-10 Identity = 31/91 (34.07%), Postives = 53/91 (58.24%), Query Frame = 1
Query: 1 VKRRFTRTASAELDQAVEYLIQHAPLAAGDFADSIDAAVAELIENPYSAQETELKGIRRKYVRRFRYALFYTIDEEKDELLIVSVRHAARR 273
+K R++ A ELD + Y+ H P A+ A I V L + P + +T+++ +R V R+ + +F+ +D+ DE++IVS+RH ARR
Sbjct: 1 MKVRWSDHAVQELDAILSYIAAHQPSASAGVARRIQDRVRLLEQFPLAGHKTDVENVRALSVVRYPFVIFHVVDDVADEVVIVSIRHTARR 91
BLAST of mRNA_P-wetherbeei_contig54482.2.1 vs. uniprot
Match: UPI001909D702 (Type II toxin-antitoxin system RelE/ParE family toxin n=2 Tax=Bradyrhizobium diazoefficiens TaxID=1355477 RepID=UPI001909D702) HSP 1 Score: 58.9 bits (141), Expect = 2.700e-9 Identity = 27/90 (30.00%), Postives = 56/90 (62.22%), Query Frame = 1
Query: 1 VKRRFTRTASAELDQAVEYLIQHAPLAAGDFADSIDAAVAELIENPYSAQETELKGIRRKYVRRFRYALFYTIDEEKDELLIVSVRHAAR 270
+K RFT A+ +L +Y+ +H+P A +I ++ L+ P + +++G+R+ RR+ Y ++Y++D+E DE++I++++H AR
Sbjct: 1 MKLRFTPRATQDLISIADYVREHSPQGALRVRAAILESLQNLVRFPRLGRPQKVEGVRKLVTRRYPYLVYYSLDQEADEVVILAIQHPAR 90
BLAST of mRNA_P-wetherbeei_contig54482.2.1 vs. uniprot
Match: UPI000D64F742 (type II toxin-antitoxin system RelE/ParE family toxin n=1 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI000D64F742) HSP 1 Score: 58.9 bits (141), Expect = 2.700e-9 Identity = 25/90 (27.78%), Postives = 57/90 (63.33%), Query Frame = 1
Query: 1 VKRRFTRTASAELDQAVEYLIQHAPLAAGDFADSIDAAVAELIENPYSAQETELKGIRRKYVRRFRYALFYTIDEEKDELLIVSVRHAAR 270
+K RFT+ A+ +L + +Y+ +H+P A +I ++ +L+ P + E++G+R+ RR+RY ++Y ++ E E+++++++H A+
Sbjct: 1 MKLRFTQRAAKDLIEIADYVREHSPKGALRVRAAILESLRDLVRFPQLGRRQEVEGVRKLVTRRYRYLVYYRLEVEAGEIVVLAIKHPAQ 90
BLAST of mRNA_P-wetherbeei_contig54482.2.1 vs. uniprot
Match: A0A2R4GNR8_RHOPL (Uncharacterized protein n=4 Tax=Rhodopseudomonas TaxID=1073 RepID=A0A2R4GNR8_RHOPL) HSP 1 Score: 57.4 bits (137), Expect = 1.080e-8 Identity = 33/93 (35.48%), Postives = 54/93 (58.06%), Query Frame = 1
Query: 1 VKRRFTRTASAELDQAVEYLIQHAPLAAGDFADSIDAAVAELIENPYSAQETELKGIRRKYVRRFRYALFYTIDEEKDELLIVSVRHAARRWP 279
+K R++ A ELD+ + ++ + AA AD I L E P + +T+L +R V R+ + +F+ +D+ KDE++I+SVRH ARR P
Sbjct: 1 MKVRWSDNAVHELDEILSFIAERNVSAAEAVADLIWERTRLLGEFPLAGHKTDLTHVRALSVVRYPFVIFHKVDDAKDEVVILSVRHTARRDP 93
BLAST of mRNA_P-wetherbeei_contig54482.2.1 vs. uniprot
Match: A0A327KQ48_9HYPH (Plasmid stabilization protein n=1 Tax=Rhodoplanes elegans TaxID=29408 RepID=A0A327KQ48_9HYPH) HSP 1 Score: 57.4 bits (137), Expect = 1.080e-8 Identity = 26/88 (29.55%), Postives = 53/88 (60.23%), Query Frame = 1
Query: 10 RFTRTASAELDQAVEYLIQHAPLAAGDFADSIDAAVAELIENPYSAQETELKGIRRKYVRRFRYALFYTIDEEKDELLIVSVRHAARR 273
R+TR A A+L +++ H P AA D+I ++ L+ P + + + G+R+ R++ Y ++Y++DE +++++++RH ARR
Sbjct: 4 RYTRRAVADLAGIADHIRFHDPAAAFRVRDAILDSIRTLVLFPRAGRRQSVAGVRKLITRKYPYLVYYSVDEATGDIVVLTIRHPARR 91
BLAST of mRNA_P-wetherbeei_contig54482.2.1 vs. uniprot
Match: A0A537SBS6_9PROT (Type II toxin-antitoxin system RelE/ParE family toxin n=3 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A537SBS6_9PROT) HSP 1 Score: 57.0 bits (136), Expect = 1.530e-8 Identity = 29/91 (31.87%), Postives = 54/91 (59.34%), Query Frame = 1
Query: 10 RFTRTASAELDQAVEYLIQHAPLAAGDFADSIDAAVAELIENPYSAQETELKGIRRKYVRRFRYALFYTIDEEKDELLIVSVRHAARRWPW 282
RFT A A+L +YL + P AA +I ++ L+E P ++ ++G+R+ RR+ Y +Y +DE+ +E++I++++H AR P+
Sbjct: 4 RFTPRAVADLISIADYLRERNPQAALSVRAAILDSLRLLLEFPKLGRDQSVEGVRKLVTRRYGYLAYYALDEQAEEVVILTIQHPARDRPF 94 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54482.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54482.2.1 >prot_P-wetherbeei_contig54482.2.1 ID=prot_P-wetherbeei_contig54482.2.1|Name=mRNA_P-wetherbeei_contig54482.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=97bp VKRRFTRTASAELDQAVEYLIQHAPLAAGDFADSIDAAVAELIENPYSAQback to top mRNA from alignment at P-wetherbeei_contig54482:167..457+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54482.2.1 ID=mRNA_P-wetherbeei_contig54482.2.1|Name=mRNA_P-wetherbeei_contig54482.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=291bp|location=Sequence derived from alignment at P-wetherbeei_contig54482:167..457+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54482:167..457+ >mRNA_P-wetherbeei_contig54482.2.1 ID=mRNA_P-wetherbeei_contig54482.2.1|Name=mRNA_P-wetherbeei_contig54482.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=291bp|location=Sequence derived from alignment at P-wetherbeei_contig54482:167..457+ (Phaeothamnion wetherbeei SAG_119_79)back to top |