mRNA_P-wetherbeei_contig54465.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig54465.1.1
Unique NamemRNA_P-wetherbeei_contig54465.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig54465.1.1 vs. uniprot
Match: UPI001797FABE (Amidohydrolase n=1 Tax=Rhodoplanes sp. TaxID=1968906 RepID=UPI001797FABE)

HSP 1 Score: 291 bits (744), Expect = 2.450e-92
Identity = 133/176 (75.57%), Postives = 154/176 (87.50%), Query Frame = 1
Query:    1 TPAPHWVQVVGGWTPMQFKEKRLPTLDEINAATGDVPTFVMHIYDRAFVNKAGLRVLGFTKDTPNPFGGIYERDGAGNPTGLVVNVASIGSLLGIFARIPKLQAEDQIVSTRHFMRELNRLGVTSVIDAGGGGQNYPDNYQATAKLAADKALTVRVGYCLFAQRPGKELEDYTSWV 528
            TPAPHWVQV+GGWTP QFKEKRLPTL EINAATGDVP FVMH+YDRA+VNKAGLR LG+ +DTP PFGG+  RDG GNPTGLVV   S+ SLL +FA++PK  AE+Q+VSTRH MRE+NRLG+TS+IDAGGGGQNYP++YQA AKLAADKALTVR+GY L AQRPG+E+EDY  W+
Sbjct:  151 TPAPHWVQVMGGWTPHQFKEKRLPTLTEINAATGDVPCFVMHLYDRAYVNKAGLRALGWNRDTPEPFGGVIARDGNGNPTGLVVATTSLVSLLSVFAKVPKFSAEEQVVSTRHMMREMNRLGMTSLIDAGGGGQNYPEHYQAIAKLAADKALTVRIGYTLMAQRPGREIEDYKGWL 326          
BLAST of mRNA_P-wetherbeei_contig54465.1.1 vs. uniprot
Match: A0A327KDV8_9HYPH (Amidohydro_3 domain-containing protein n=3 Tax=Rhodoplanes TaxID=29407 RepID=A0A327KDV8_9HYPH)

HSP 1 Score: 289 bits (740), Expect = 2.730e-91
Identity = 133/176 (75.57%), Postives = 153/176 (86.93%), Query Frame = 1
Query:    1 TPAPHWVQVVGGWTPMQFKEKRLPTLDEINAATGDVPTFVMHIYDRAFVNKAGLRVLGFTKDTPNPFGGIYERDGAGNPTGLVVNVASIGSLLGIFARIPKLQAEDQIVSTRHFMRELNRLGVTSVIDAGGGGQNYPDNYQATAKLAADKALTVRVGYCLFAQRPGKELEDYTSWV 528
            TPAPHWVQV+GGWTP QFKEKRLPTL+EINAATGDVP +VMH+YDR FVNKAGLR LG+ +DTP PFGG+  RDG+G PTGLVV   S+ SLL +FA++PKL  EDQI STRH MRELNRLG+TS+IDAGGGGQNYP++YQA AKLAADKALTVR+GY L AQRPG+E+EDY  W+
Sbjct:  197 TPAPHWVQVMGGWTPHQFKEKRLPTLEEINAATGDVPCYVMHLYDRGFVNKAGLRALGWNRDTPEPFGGVIARDGSGMPTGLVVATTSLVSLLSVFAKVPKLSPEDQITSTRHMMRELNRLGMTSLIDAGGGGQNYPEHYQAIAKLAADKALTVRIGYTLMAQRPGREIEDYKGWL 372          
BLAST of mRNA_P-wetherbeei_contig54465.1.1 vs. uniprot
Match: A0A327KJ73_9HYPH (Amidohydro_3 domain-containing protein n=3 Tax=Rhodoplanes piscinae TaxID=444923 RepID=A0A327KJ73_9HYPH)

HSP 1 Score: 287 bits (734), Expect = 3.000e-91
Identity = 130/176 (73.86%), Postives = 154/176 (87.50%), Query Frame = 1
Query:    1 TPAPHWVQVVGGWTPMQFKEKRLPTLDEINAATGDVPTFVMHIYDRAFVNKAGLRVLGFTKDTPNPFGGIYERDGAGNPTGLVVNVASIGSLLGIFARIPKLQAEDQIVSTRHFMRELNRLGVTSVIDAGGGGQNYPDNYQATAKLAADKALTVRVGYCLFAQRPGKELEDYTSWV 528
            TPAPHWVQV+GGWTP QF+EKRLPTLDEINAA GDVP FVMH+YDRAFVNKAGLR LG+++DTP PFGG+  RDG G PTGLV+   S+ SLL +FA++PKL A++QI STRH MRELNRLG+TS+IDAGGGGQNYP++YQA A+LAADKALTVR+GY L AQRPG+E++DY  W+
Sbjct:  110 TPAPHWVQVMGGWTPHQFREKRLPTLDEINAAAGDVPCFVMHLYDRAFVNKAGLRALGWSRDTPEPFGGVIARDGNGTPTGLVIATTSLVSLLSVFAKVPKLSADEQIASTRHMMRELNRLGLTSLIDAGGGGQNYPEHYQAIARLAADKALTVRIGYTLMAQRPGREIDDYRGWL 285          
BLAST of mRNA_P-wetherbeei_contig54465.1.1 vs. uniprot
Match: A0A327K4Q3_9HYPH (Amidohydro_3 domain-containing protein (Fragment) n=2 Tax=Rhodoplanes elegans TaxID=29408 RepID=A0A327K4Q3_9HYPH)

HSP 1 Score: 286 bits (732), Expect = 8.560e-91
Identity = 131/176 (74.43%), Postives = 152/176 (86.36%), Query Frame = 1
Query:    1 TPAPHWVQVVGGWTPMQFKEKRLPTLDEINAATGDVPTFVMHIYDRAFVNKAGLRVLGFTKDTPNPFGGIYERDGAGNPTGLVVNVASIGSLLGIFARIPKLQAEDQIVSTRHFMRELNRLGVTSVIDAGGGGQNYPDNYQATAKLAADKALTVRVGYCLFAQRPGKELEDYTSWV 528
            TPAPHWVQV+GGWTP QFKEKRLPTL EINAATGDVP +VMH+YDR FVNKAGLR LG+ +DTP+PFGG+  RDG+G PTGLV+   S+ SLL +F +IPKL  EDQ+ STRH MRELNRLG+TS+IDAGGGGQNYP++YQA AKLAADKALTVR+GY L AQRPG+E+EDY  W+
Sbjct:  133 TPAPHWVQVMGGWTPHQFKEKRLPTLAEINAATGDVPCYVMHLYDRGFVNKAGLRALGWNRDTPDPFGGVIARDGSGMPTGLVIATTSLVSLLSVFGKIPKLSPEDQVTSTRHMMRELNRLGMTSLIDAGGGGQNYPEHYQAIAKLAADKALTVRIGYTLMAQRPGREIEDYKGWL 308          
BLAST of mRNA_P-wetherbeei_contig54465.1.1 vs. uniprot
Match: A0A537AQX9_9PROT (Amidohydrolase (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537AQX9_9PROT)

HSP 1 Score: 269 bits (688), Expect = 1.190e-85
Identity = 122/175 (69.71%), Postives = 148/175 (84.57%), Query Frame = 1
Query:    1 TPAPHWVQVVGGWTPMQFKEKRLPTLDEINAATGDVPTFVMHIYDRAFVNKAGLRVLGFTKDTPNPFGGIYERDGAGNPTGLVVNVASIGSLLGIFARIPKLQAEDQIVSTRHFMRELNRLGVTSVIDAGGGGQNYPDNYQATAKLAADKALTVRVGYCLFAQRPGKELEDYTSW 525
            TPAPHWVQV+GGWT  QF E+R PTL+EINAATGD P  +MH+YDRA++N+AG+R LG+TKDTPN FGG  ERD +G+PTGLV++  S+ SL+ ++ RIP+L  EDQI+STRHFMRE NR GVTSV+DAGGGGQNYPDNY A AKLAAD  +T+R+GY LFAQ PGKELE+YT+W
Sbjct:    9 TPAPHWVQVIGGWTWAQFAEQRYPTLEEINAATGDTPCMIMHLYDRAWLNRAGIRALGWTKDTPNMFGGAIERDASGHPTGLVMSTTSLASLVSVWLRIPRLSPEDQILSTRHFMREHNRFGVTSVVDAGGGGQNYPDNYAAIAKLAADGQMTLRIGYTLFAQAPGKELENYTAW 183          
BLAST of mRNA_P-wetherbeei_contig54465.1.1 vs. uniprot
Match: A0A536YMR8_9PROT (Amidohydrolase n=6 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536YMR8_9PROT)

HSP 1 Score: 272 bits (695), Expect = 4.350e-85
Identity = 124/175 (70.86%), Postives = 149/175 (85.14%), Query Frame = 1
Query:    1 TPAPHWVQVVGGWTPMQFKEKRLPTLDEINAATGDVPTFVMHIYDRAFVNKAGLRVLGFTKDTPNPFGGIYERDGAGNPTGLVVNVASIGSLLGIFARIPKLQAEDQIVSTRHFMRELNRLGVTSVIDAGGGGQNYPDNYQATAKLAADKALTVRVGYCLFAQRPGKELEDYTSW 525
            TPAPHWVQV+GGWT  QF E+R PTL+EINAATGD P  +MH+YDRA++N+AG+R LG+TKDTPN FGG  ERD +GNPTGLV++  S+ SL+ ++ RIP+L  EDQI+STRHFMRE NRLGVTSVIDAGGGGQNYPDNY A AKLAAD  +T+R+GY LFAQ PGKEL++YT+W
Sbjct:  161 TPAPHWVQVIGGWTWAQFTEQRYPTLEEINAATGDTPCMIMHLYDRAWLNRAGIRALGWTKDTPNMFGGAIERDASGNPTGLVMSTTSLASLVSVWLRIPRLSPEDQILSTRHFMREHNRLGVTSVIDAGGGGQNYPDNYAAIAKLAADGQMTLRIGYTLFAQAPGKELDNYTAW 335          
BLAST of mRNA_P-wetherbeei_contig54465.1.1 vs. uniprot
Match: A0A1F3YUK5_9PROT (Amidohydrolase n=1 Tax=Betaproteobacteria bacterium RBG_16_64_18 TaxID=1797477 RepID=A0A1F3YUK5_9PROT)

HSP 1 Score: 269 bits (687), Expect = 2.050e-84
Identity = 121/175 (69.14%), Postives = 148/175 (84.57%), Query Frame = 1
Query:    1 TPAPHWVQVVGGWTPMQFKEKRLPTLDEINAATGDVPTFVMHIYDRAFVNKAGLRVLGFTKDTPNPFGGIYERDGAGNPTGLVVNVASIGSLLGIFARIPKLQAEDQIVSTRHFMRELNRLGVTSVIDAGGGGQNYPDNYQATAKLAADKALTVRVGYCLFAQRPGKELEDYTSW 525
            TPAPHWVQV+GGWT  QF EKR PTLDEINAATGD P  VMH+YDR ++N+AGLRVLG+T+DTP+PFGG+ ERD +GNPTGL+V    + +L+G + R+P+L AEDQ +STRHFMRE NRLG+TSV+DAGGGGQNYPDNY + A+LAA+K LT+R+GY LFAQ  GKELE+Y +W
Sbjct:  107 TPAPHWVQVIGGWTWAQFAEKRFPTLDEINAATGDTPAMVMHLYDRTWINRAGLRVLGWTRDTPDPFGGMIERDASGNPTGLLVATTGLPALVGAWLRVPRLSAEDQTISTRHFMREHNRLGLTSVVDAGGGGQNYPDNYASIAQLAAEKRLTLRIGYTLFAQEGGKELENYQAW 281          
BLAST of mRNA_P-wetherbeei_contig54465.1.1 vs. uniprot
Match: A0A2M6VG56_9BURK (Amidohydro_3 domain-containing protein n=4 Tax=unclassified Limnohabitans TaxID=2626134 RepID=A0A2M6VG56_9BURK)

HSP 1 Score: 262 bits (669), Expect = 1.030e-81
Identity = 119/175 (68.00%), Postives = 146/175 (83.43%), Query Frame = 1
Query:    1 TPAPHWVQVVGGWTPMQFKEKRLPTLDEINAATGDVPTFVMHIYDRAFVNKAGLRVLGFTKDTPNPFGGIYERDGAGNPTGLVVNVASIGSLLGIFARIPKLQAEDQIVSTRHFMRELNRLGVTSVIDAGGGGQNYPDNYQATAKLAADKALTVRVGYCLFAQRPGKELEDYTSW 525
            TP+PHWVQV+GGWT  QF EKR PTLDEINAATGD P  +MH+YDRA++N+AGLRVLG+ KDTPNPFGG  ERDGAGNPTGL+V    + +L+  + +IP+L  +DQI+ST+HFMRE NRLG+TSVIDAGGGGQNYPDNY A A+LA DK +T+R+GY LFAQ  GKE+++Y +W
Sbjct:  108 TPSPHWVQVIGGWTWAQFAEKRFPTLDEINAATGDTPAMIMHLYDRAWINRAGLRVLGWNKDTPNPFGGQIERDGAGNPTGLLVATIGLPALVNTWLKIPRLSPDDQILSTQHFMRENNRLGLTSVIDAGGGGQNYPDNYAAIAQLARDKKMTMRIGYELFAQAGGKEIDNYQAW 282          
BLAST of mRNA_P-wetherbeei_contig54465.1.1 vs. uniprot
Match: A0A1F4AZI1_9PROT (Amidohydro_3 domain-containing protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4AZI1_9PROT)

HSP 1 Score: 259 bits (662), Expect = 7.680e-81
Identity = 117/175 (66.86%), Postives = 144/175 (82.29%), Query Frame = 1
Query:    1 TPAPHWVQVVGGWTPMQFKEKRLPTLDEINAATGDVPTFVMHIYDRAFVNKAGLRVLGFTKDTPNPFGGIYERDGAGNPTGLVVNVASIGSLLGIFARIPKLQAEDQIVSTRHFMRELNRLGVTSVIDAGGGGQNYPDNYQATAKLAADKALTVRVGYCLFAQRPGKELEDYTSW 525
            TPAPHWVQV+GGWT  QF EKR PTLDEINAATGD P  VMH+YDRA++N+A LRVLG+ +DTP+ FGG  +RD +G PTGLVV   S+ SL+G++  IP+L  EDQ +STRHFMRE NRLG+TS++DAGGGGQNYPDNY++ A+LA D  LT+R+GY LFAQ PGKE+E+Y+ W
Sbjct:   89 TPAPHWVQVIGGWTWAQFAEKRYPTLDEINAATGDTPAMVMHLYDRAWLNRAALRVLGWNRDTPDMFGGTIDRDASGMPTGLVVATTSLASLVGVWLSIPRLSQEDQTISTRHFMREHNRLGITSIVDAGGGGQNYPDNYRSIAQLANDGLLTLRIGYTLFAQTPGKEIENYSDW 263          
BLAST of mRNA_P-wetherbeei_contig54465.1.1 vs. uniprot
Match: A0A537E2J7_9PROT (Amidohydrolase (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537E2J7_9PROT)

HSP 1 Score: 256 bits (654), Expect = 8.680e-81
Identity = 115/175 (65.71%), Postives = 143/175 (81.71%), Query Frame = 1
Query:    1 TPAPHWVQVVGGWTPMQFKEKRLPTLDEINAATGDVPTFVMHIYDRAFVNKAGLRVLGFTKDTPNPFGGIYERDGAGNPTGLVVNVASIGSLLGIFARIPKLQAEDQIVSTRHFMRELNRLGVTSVIDAGGGGQNYPDNYQATAKLAADKALTVRVGYCLFAQRPGKELEDYTSW 525
            TP PHWVQV+GGWT  QF EKR PTL+EINAATGD P  +MH+YDRA++N++ +RVLG+ ++ P  FGG  ERD  GNPTGLV++  S+ SL+ ++ R+P+L  E+Q+ STRHFMRE NRLGVTSVIDAGGGGQNYP+NY A AKLAADK LT+R+GY LFAQ PGKEL++Y +W
Sbjct:  133 TPPPHWVQVIGGWTWAQFAEKRFPTLEEINAATGDTPCMIMHLYDRAWLNRSAIRVLGWEREVPKLFGGFVERDAGGNPTGLVMSTTSLASLVAVWLRVPRLSPEEQVTSTRHFMREHNRLGVTSVIDAGGGGQNYPENYAAIAKLAADKLLTLRIGYELFAQAPGKELDNYLAW 307          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54465.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001797FABE2.450e-9275.57Amidohydrolase n=1 Tax=Rhodoplanes sp. TaxID=19689... [more]
A0A327KDV8_9HYPH2.730e-9175.57Amidohydro_3 domain-containing protein n=3 Tax=Rho... [more]
A0A327KJ73_9HYPH3.000e-9173.86Amidohydro_3 domain-containing protein n=3 Tax=Rho... [more]
A0A327K4Q3_9HYPH8.560e-9174.43Amidohydro_3 domain-containing protein (Fragment) ... [more]
A0A537AQX9_9PROT1.190e-8569.71Amidohydrolase (Fragment) n=1 Tax=Betaproteobacter... [more]
A0A536YMR8_9PROT4.350e-8570.86Amidohydrolase n=6 Tax=Betaproteobacteria bacteriu... [more]
A0A1F3YUK5_9PROT2.050e-8469.14Amidohydrolase n=1 Tax=Betaproteobacteria bacteriu... [more]
A0A2M6VG56_9BURK1.030e-8168.00Amidohydro_3 domain-containing protein n=4 Tax=unc... [more]
A0A1F4AZI1_9PROT7.680e-8166.86Amidohydro_3 domain-containing protein n=2 Tax=unc... [more]
A0A537E2J7_9PROT8.680e-8165.71Amidohydrolase (Fragment) n=1 Tax=Betaproteobacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig54465contigP-wetherbeei_contig54465:1..528 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog592316.Pat9b_3286
PFAMsAmidohydro_3
Model size528
Max annot lvl1236|Gammaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.97e-68
EggNOG OGsCOG1574@1|root,COG1574@2|Bacteria,1MWP2@1224|Proteobacteria,1RNB7@1236|Gammaproteobacteria,3VYC4@53335|Pantoea
DescriptionAmidohydrolase family
Cds size528
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186813.9731033-CDS-P-wetherbeei_contig54465:0..5281683186813.9731033-CDS-P-wetherbeei_contig54465:0..528Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig54465 1..528 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig54465.1.1prot_P-wetherbeei_contig54465.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig54465 1..528 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig54465.1.1

>prot_P-wetherbeei_contig54465.1.1 ID=prot_P-wetherbeei_contig54465.1.1|Name=mRNA_P-wetherbeei_contig54465.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=176bp
TPAPHWVQVVGGWTPMQFKEKRLPTLDEINAATGDVPTFVMHIYDRAFVN
KAGLRVLGFTKDTPNPFGGIYERDGAGNPTGLVVNVASIGSLLGIFARIP
KLQAEDQIVSTRHFMRELNRLGVTSVIDAGGGGQNYPDNYQATAKLAADK
ALTVRVGYCLFAQRPGKELEDYTSWV
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mRNA from alignment at P-wetherbeei_contig54465:1..528+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig54465.1.1 ID=mRNA_P-wetherbeei_contig54465.1.1|Name=mRNA_P-wetherbeei_contig54465.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig54465:1..528+ (Phaeothamnion wetherbeei SAG_119_79)
ACCCCGGCGCCGCATTGGGTCCAGGTGGTCGGCGGCTGGACGCCGATGCA GTTCAAGGAAAAACGGCTGCCGACGCTCGACGAGATCAACGCCGCCACCG GCGATGTCCCGACCTTCGTCATGCACATTTACGACCGCGCCTTCGTCAAC AAGGCCGGTTTGCGCGTGCTCGGCTTCACCAAGGACACGCCGAACCCATT TGGCGGCATTTATGAGCGCGACGGCGCCGGCAATCCGACCGGGCTGGTCG TCAATGTCGCCAGCATCGGCAGCCTGCTCGGCATTTTCGCCCGGATTCCG AAATTGCAGGCCGAGGACCAGATCGTCTCGACCCGGCATTTCATGCGCGA ACTCAACCGGCTCGGCGTCACCAGCGTGATCGACGCCGGCGGCGGCGGCC AGAATTATCCCGATAATTATCAGGCGACCGCCAAACTCGCCGCCGACAAG GCGCTGACGGTGCGGGTCGGCTATTGCCTGTTCGCCCAGCGTCCCGGCAA GGAGCTGGAGGACTATACGAGCTGGGTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig54465:1..528+

>mRNA_P-wetherbeei_contig54465.1.1 ID=mRNA_P-wetherbeei_contig54465.1.1|Name=mRNA_P-wetherbeei_contig54465.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig54465:1..528+ (Phaeothamnion wetherbeei SAG_119_79)
ACCCCGGCGCCGCATTGGGTCCAGGTGGTCGGCGGCTGGACGCCGATGCA
GTTCAAGGAAAAACGGCTGCCGACGCTCGACGAGATCAACGCCGCCACCG
GCGATGTCCCGACCTTCGTCATGCACATTTACGACCGCGCCTTCGTCAAC
AAGGCCGGTTTGCGCGTGCTCGGCTTCACCAAGGACACGCCGAACCCATT
TGGCGGCATTTATGAGCGCGACGGCGCCGGCAATCCGACCGGGCTGGTCG
TCAATGTCGCCAGCATCGGCAGCCTGCTCGGCATTTTCGCCCGGATTCCG
AAATTGCAGGCCGAGGACCAGATCGTCTCGACCCGGCATTTCATGCGCGA
ACTCAACCGGCTCGGCGTCACCAGCGTGATCGACGCCGGCGGCGGCGGCC
AGAATTATCCCGATAATTATCAGGCGACCGCCAAACTCGCCGCCGACAAG
GCGCTGACGGTGCGGGTCGGCTATTGCCTGTTCGCCCAGCGTCCCGGCAA
GGAGCTGGAGGACTATACGAGCTGGGTC
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