mRNA_P-wetherbeei_contig54453.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54453.1.1 vs. uniprot
Match: A0A1E4HRX8_9PROT ((R)-citramalate synthase (Fragment) n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1E4HRX8_9PROT) HSP 1 Score: 323 bits (828), Expect = 5.940e-109 Identity = 157/177 (88.70%), Postives = 169/177 (95.48%), Query Frame = 1
Query: 1 AMACLAAADKAGARWLVLCDTNGGTLPHEIERIVGEVCKVIPGERLGIHTHNDTENAVANTLAAVRAGVRQVQGTINGLGERCGNANMISLIPNLTLKMGFETGLKEGALQRLTHLSRLLDDRLNVVPNRSAAYVGTRAFAHKGGLHVSAVEKDPKTYEHIDPELVGNQRIIVVSDQ 531
AMACL AA+KAGARWLVLCDTNGGTLPHE+ERIVGEV K IPG+R+GIHTHNDTENAVAN+LAAVRAG RQVQGTINGLGERCGNANMI+LIPNL LKMGF+TGLK+GA+QRLTHLSRLLDDRLN+ NRSAAYVGTRAFAHKG LHVSAVEKDPKTYEH+DPE+VGNQRIIVVSDQ
Sbjct: 159 AMACLVAAEKAGARWLVLCDTNGGTLPHEVERIVGEVVKKIPGDRIGIHTHNDTENAVANSLAAVRAGARQVQGTINGLGERCGNANMIALIPNLVLKMGFDTGLKDGAMQRLTHLSRLLDDRLNMPTNRSAAYVGTRAFAHKGRLHVSAVEKDPKTYEHVDPEVVGNQRIIVVSDQ 335
BLAST of mRNA_P-wetherbeei_contig54453.1.1 vs. uniprot
Match: A0A1T4TFD2_9HYPH ((R)-citramalate synthase n=14 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1T4TFD2_9HYPH) HSP 1 Score: 326 bits (836), Expect = 1.750e-107 Identity = 159/177 (89.83%), Postives = 169/177 (95.48%), Query Frame = 1
Query: 1 AMACLAAADKAGARWLVLCDTNGGTLPHEIERIVGEVCKVIPGERLGIHTHNDTENAVANTLAAVRAGVRQVQGTINGLGERCGNANMISLIPNLTLKMGFETGLKEGALQRLTHLSRLLDDRLNVVPNRSAAYVGTRAFAHKGGLHVSAVEKDPKTYEHIDPELVGNQRIIVVSDQ 531
A+ACL AA+KAGARWLVLCDTNGGT+PHEIERIVGEVC IPGE++GIHTHNDTENAVANTLAAVRAG RQVQGTINGLGERCGNANMISLI NL +KMG+ETGLK+GALQRLTHLSRLLDDRLNV NRSAAYVGTRAFAHKGGLHVSAVEKDPKTYEH+DPE+VGNQRIIVVSDQ
Sbjct: 159 ALACLHAAEKAGARWLVLCDTNGGTMPHEIERIVGEVCARIPGEKIGIHTHNDTENAVANTLAAVRAGARQVQGTINGLGERCGNANMISLIANLVIKMGYETGLKDGALQRLTHLSRLLDDRLNVPTNRSAAYVGTRAFAHKGGLHVSAVEKDPKTYEHVDPEMVGNQRIIVVSDQ 335
BLAST of mRNA_P-wetherbeei_contig54453.1.1 vs. uniprot
Match: A0A5C8PDU8_9HYPH ((R)-citramalate synthase n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A5C8PDU8_9HYPH) HSP 1 Score: 296 bits (758), Expect = 8.190e-96 Identity = 144/177 (81.36%), Postives = 159/177 (89.83%), Query Frame = 1
Query: 1 AMACLAAADKAGARWLVLCDTNGGTLPHEIERIVGEVCKVIPGERLGIHTHNDTENAVANTLAAVRAGVRQVQGTINGLGERCGNANMISLIPNLTLKMGFETGLKEGALQRLTHLSRLLDDRLNVVPNRSAAYVGTRAFAHKGGLHVSAVEKDPKTYEHIDPELVGNQRIIVVSDQ 531
AM CL A +AGARWLVLCDTNGGTLPH+IERIVGEVC IPG +GIH HNDTENAVAN+LAAVR G RQVQGTINGLGERCGNANMI+LIP+L LKMG++TG+ L +LTHLSRLLDDRLN+VPNRSAAYVG+RAFAHKGGLHVSAVEKDP+TYEHIDP +VGN+RIIVVSDQ
Sbjct: 159 AMTCLREALRAGARWLVLCDTNGGTLPHDIERIVGEVCAEIPGTSIGIHCHNDTENAVANSLAAVRVGARQVQGTINGLGERCGNANMIALIPSLMLKMGYDTGIPAENLAKLTHLSRLLDDRLNLVPNRSAAYVGSRAFAHKGGLHVSAVEKDPRTYEHIDPAVVGNERIIVVSDQ 335
BLAST of mRNA_P-wetherbeei_contig54453.1.1 vs. uniprot
Match: A0A3S2VN96_9PROT ((R)-citramalate synthase n=1 Tax=Hwanghaeella grinnelliae TaxID=2500179 RepID=A0A3S2VN96_9PROT) HSP 1 Score: 287 bits (735), Expect = 2.160e-92 Identity = 141/177 (79.66%), Postives = 155/177 (87.57%), Query Frame = 1
Query: 1 AMACLAAADKAGARWLVLCDTNGGTLPHEIERIVGEVCKVIPGERLGIHTHNDTENAVANTLAAVRAGVRQVQGTINGLGERCGNANMISLIPNLTLKMGFETGLKEGALQRLTHLSRLLDDRLNVVPNRSAAYVGTRAFAHKGGLHVSAVEKDPKTYEHIDPELVGNQRIIVVSDQ 531
AMAC+ AA +AGARW+VLCDTNGGTLPHEIE+IVGEV KV+PG +GIH HNDTENAVAN+LAAVRAG RQVQGT+NGLGERCGNAN+ISLIP+LTLKMG+ETGL EG L +LT LSRLLD+RLN NR AYVG AFAHKGGLHVSAV KDP+TYEHIDP LVGN R IVVSDQ
Sbjct: 157 AMACVTAAYEAGARWVVLCDTNGGTLPHEIEQIVGEVVKVVPGSHIGIHAHNDTENAVANSLAAVRAGARQVQGTLNGLGERCGNANIISLIPSLTLKMGYETGLTEGGLAKLTELSRLLDERLNRPANRHQAYVGEAAFAHKGGLHVSAVAKDPRTYEHIDPTLVGNHRTIVVSDQ 333
BLAST of mRNA_P-wetherbeei_contig54453.1.1 vs. uniprot
Match: A0A6N7F629_9PROT ((R)-citramalate synthase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7F629_9PROT) HSP 1 Score: 283 bits (723), Expect = 1.370e-90 Identity = 135/177 (76.27%), Postives = 156/177 (88.14%), Query Frame = 1
Query: 1 AMACLAAADKAGARWLVLCDTNGGTLPHEIERIVGEVCKVIPGERLGIHTHNDTENAVANTLAAVRAGVRQVQGTINGLGERCGNANMISLIPNLTLKMGFETGLKEGALQRLTHLSRLLDDRLNVVPNRSAAYVGTRAFAHKGGLHVSAVEKDPKTYEHIDPELVGNQRIIVVSDQ 531
A++C+ AA ++GARW+VLCDTNGGTLP EIERIVGEV + +PG LGIH HNDTENAVAN+LAAVRAG RQ+QGT+NGLGERCGNAN++S++P+L LKMGFETGL GAL+RLTH+SRLLD+RLN PNR A YVG AFAHKGGLH SAVEKDP+TYEHI+PELVGN R IVVSDQ
Sbjct: 158 ALSCVKAAYESGARWVVLCDTNGGTLPDEIERIVGEVARHVPGSHLGIHCHNDTENAVANSLAAVRAGARQIQGTLNGLGERCGNANLVSIVPSLMLKMGFETGLDAGALKRLTHVSRLLDERLNRAPNRHAPYVGDSAFAHKGGLHASAVEKDPRTYEHIEPELVGNVRHIVVSDQ 334
BLAST of mRNA_P-wetherbeei_contig54453.1.1 vs. uniprot
Match: A0A4R6WD81_9PROT ((R)-citramalate synthase n=1 Tax=Dongia mobilis TaxID=578943 RepID=A0A4R6WD81_9PROT) HSP 1 Score: 283 bits (723), Expect = 1.490e-90 Identity = 138/177 (77.97%), Postives = 156/177 (88.14%), Query Frame = 1
Query: 1 AMACLAAADKAGARWLVLCDTNGGTLPHEIERIVGEVCKVIPGERLGIHTHNDTENAVANTLAAVRAGVRQVQGTINGLGERCGNANMISLIPNLTLKMGFETGLKEGALQRLTHLSRLLDDRLNVVPNRSAAYVGTRAFAHKGGLHVSAVEKDPKTYEHIDPELVGNQRIIVVSDQ 531
A+ C AA +AGARW+VLCDTNGGTLPHE+ERIVGEV IPG RLGIH HNDTENAVAN+LAAVRAGVRQ+QGT+NGLGERCGNAN++SLIP+L LK F+ GL E L++LTH+SRLLD+RLN PNRSAAYVG AFAHKGGLHVSAVEKDP+TYEHI+PELVGN+R IVVSDQ
Sbjct: 159 ALDCALAAYQAGARWIVLCDTNGGTLPHEVERIVGEVTAKIPGARLGIHCHNDTENAVANSLAAVRAGVRQIQGTLNGLGERCGNANLVSLIPSLMLKSNFKVGLTEQDLKQLTHVSRLLDERLNRAPNRSAAYVGESAFAHKGGLHVSAVEKDPRTYEHIEPELVGNRRHIVVSDQ 335
BLAST of mRNA_P-wetherbeei_contig54453.1.1 vs. uniprot
Match: A0A4Q3CCA9_9SPHN (Citramalate synthase (Fragment) n=1 Tax=Sphingomonadales bacterium TaxID=1978525 RepID=A0A4Q3CCA9_9SPHN) HSP 1 Score: 276 bits (705), Expect = 1.850e-89 Identity = 132/177 (74.58%), Postives = 153/177 (86.44%), Query Frame = 1
Query: 1 AMACLAAADKAGARWLVLCDTNGGTLPHEIERIVGEVCKVIPGERLGIHTHNDTENAVANTLAAVRAGVRQVQGTINGLGERCGNANMISLIPNLTLKMGFETGLKEGALQRLTHLSRLLDDRLNVVPNRSAAYVGTRAFAHKGGLHVSAVEKDPKTYEHIDPELVGNQRIIVVSDQ 531
A+ C+ AA +AGARW+VLCDTNGGTLP EIERIVGE K +PG+ LGIH H+DT+NAVAN+LAAVRAG RQVQGT+NGLGERCGNAN+IS+IP+L LKMG++TG+ L RLTHLSR LDDRLN PN SAAYVG RAFAHKGGLHVSA+EKDP+TYEH+ PE VGN+R I+VSDQ
Sbjct: 28 ALRCITAAYEAGARWVVLCDTNGGTLPDEIERIVGEATKHVPGDHLGIHCHDDTDNAVANSLAAVRAGARQVQGTLNGLGERCGNANLISIIPSLMLKMGYDTGVTTEELARLTHLSRFLDDRLNRAPNSSAAYVGERAFAHKGGLHVSAIEKDPRTYEHVTPEAVGNERRILVSDQ 204
BLAST of mRNA_P-wetherbeei_contig54453.1.1 vs. uniprot
Match: A0A3N1M8U5_9PROT ((R)-citramalate synthase n=1 Tax=Stella humosa TaxID=94 RepID=A0A3N1M8U5_9PROT) HSP 1 Score: 280 bits (715), Expect = 2.360e-89 Identity = 140/177 (79.10%), Postives = 152/177 (85.88%), Query Frame = 1
Query: 1 AMACLAAADKAGARWLVLCDTNGGTLPHEIERIVGEVCKVIPGERLGIHTHNDTENAVANTLAAVRAGVRQVQGTINGLGERCGNANMISLIPNLTLKMGFETGLKEGALQRLTHLSRLLDDRLNVVPNRSAAYVGTRAFAHKGGLHVSAVEKDPKTYEHIDPELVGNQRIIVVSDQ 531
AMACL AA AGARW+VLCDTNGGTLP EIE IV +V IPGERLGIH HNDTENAVAN+LAAVRAG RQVQGT+NGLGERCGNAN+ISLIP+L LKMG ETG+ L+RLT LSRLLD+RLN PNR AAYVG AFAHKGGLHVSAVEKDP+TYEHIDP LVGN+R I+VSDQ
Sbjct: 157 AMACLEAARDAGARWMVLCDTNGGTLPDEIEAIVRQVAGRIPGERLGIHCHNDTENAVANSLAAVRAGARQVQGTLNGLGERCGNANLISLIPSLVLKMGLETGIDRDGLKRLTGLSRLLDERLNRAPNRHAAYVGDAAFAHKGGLHVSAVEKDPRTYEHIDPALVGNRRHIIVSDQ 333
BLAST of mRNA_P-wetherbeei_contig54453.1.1 vs. uniprot
Match: A0A1Y0BB80_9BACT ((R)-citramalate synthase n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A1Y0BB80_9BACT) HSP 1 Score: 279 bits (713), Expect = 7.720e-89 Identity = 137/177 (77.40%), Postives = 156/177 (88.14%), Query Frame = 1
Query: 1 AMACLAAADKAGARWLVLCDTNGGTLPHEIERIVGEVCKVIPGERLGIHTHNDTENAVANTLAAVRAGVRQVQGTINGLGERCGNANMISLIPNLTLKMGFETGLKEGALQRLTHLSRLLDDRLNVVPNRSAAYVGTRAFAHKGGLHVSAVEKDPKTYEHIDPELVGNQRIIVVSDQ 531
A+A + AA +AGARW+VLCDTNGGTLP EIE+IVG V K IPG+RLGIH HNDTENAVAN+LAAVRAGVRQVQGT+NGLGERCGNAN+IS+IPNL LKMGFETG+ +L+RLTH+S LLD+RLN PNR AAYVG AFAHKGGLHVSAV KDP+TYEHI+P LVGN+R IV+SDQ
Sbjct: 166 ALAAVKAAYEAGARWVVLCDTNGGTLPDEIEQIVGAVAKHIPGDRLGIHCHNDTENAVANSLAAVRAGVRQVQGTLNGLGERCGNANLISIIPNLALKMGFETGVSAESLKRLTHVSHLLDERLNRAPNRHAAYVGESAFAHKGGLHVSAVAKDPRTYEHIEPGLVGNERQIVMSDQ 342
BLAST of mRNA_P-wetherbeei_contig54453.1.1 vs. uniprot
Match: UPI000DF249B3 (citramalate synthase n=1 Tax=Oleisolibacter albus TaxID=2171757 RepID=UPI000DF249B3) HSP 1 Score: 278 bits (711), Expect = 1.190e-88 Identity = 133/177 (75.14%), Postives = 152/177 (85.88%), Query Frame = 1
Query: 1 AMACLAAADKAGARWLVLCDTNGGTLPHEIERIVGEVCKVIPGERLGIHTHNDTENAVANTLAAVRAGVRQVQGTINGLGERCGNANMISLIPNLTLKMGFETGLKEGALQRLTHLSRLLDDRLNVVPNRSAAYVGTRAFAHKGGLHVSAVEKDPKTYEHIDPELVGNQRIIVVSDQ 531
A+AC+ +A +AGARW+VLCDTNGGTLPHEIERIV EV + IPGERLGIH HNDTENAVAN+LAAVRAG R +QGT+NGLGERCGNAN++SL+P L LKMGFETG+ G L RL H+SRLLD+RLN PNR A YVG AFAHKGGLHVSAVEKDP +YEHIDP VGN+R ++VSDQ
Sbjct: 159 ALACVRSAYEAGARWIVLCDTNGGTLPHEIERIVTEVARSIPGERLGIHCHNDTENAVANSLAAVRAGARMIQGTLNGLGERCGNANLVSLLPTLMLKMGFETGVSHGNLTRLVHISRLLDERLNRAPNRHAPYVGEAAFAHKGGLHVSAVEKDPSSYEHIDPAQVGNRRHVLVSDQ 335 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54453.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54453.1.1 >prot_P-wetherbeei_contig54453.1.1 ID=prot_P-wetherbeei_contig54453.1.1|Name=mRNA_P-wetherbeei_contig54453.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=176bp MACLAAADKAGARWLVLCDTNGGTLPHEIERIVGEVCKVIPGERLGIHTHback to top mRNA from alignment at P-wetherbeei_contig54453:1..531- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54453.1.1 ID=mRNA_P-wetherbeei_contig54453.1.1|Name=mRNA_P-wetherbeei_contig54453.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=531bp|location=Sequence derived from alignment at P-wetherbeei_contig54453:1..531- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54453:1..531- >mRNA_P-wetherbeei_contig54453.1.1 ID=mRNA_P-wetherbeei_contig54453.1.1|Name=mRNA_P-wetherbeei_contig54453.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig54453:1..531- (Phaeothamnion wetherbeei SAG_119_79)back to top |