mRNA_P-wetherbeei_contig5438.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5438.2.1
Unique NamemRNA_P-wetherbeei_contig5438.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5438.2.1 vs. uniprot
Match: A0A835Z7W2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7W2_9STRA)

HSP 1 Score: 112 bits (280), Expect = 8.920e-22
Identity = 78/246 (31.71%), Postives = 123/246 (50.00%), Query Frame = 1
Query:   73 DGSQFLDYLKGQQRMAFDWLYDPVDRC-IRCIIWATAAQIMASMKYS-DVVLQDCTFGTNQFGILLCLFIGVDCNMR-----YAVLEREDTAGMIWAFEWFIHNCCPPGVH-PVTWLTDGCAAAAAAIM-KVCPSSHHF-LCSWHLWKNIKHTDQRMRGESLLRDAIKTAFRKAEYSLSEASFRAAW-GSLEKLLDVPAVPDQLRRYFA-RLYTDRGRWAFCYRSRAFTLSLSATSRVEGTFAALK 774
            D  +F+  L   Q+      Y+  D C  +   WAT  Q+  +M++  DV+ QDCT GTN++G+ L + +GV+ + +      A+LEREDT    W   +F+H     G H P    TD  ++ A  +  + C  +       + L++  +H   +    SL++        +A  + +EASF+ AW G L+ L+D  A  D + +Y    +Y  R RWAFCYR    TL +++T R EG F  LK
Sbjct:  225 DCQEFIKQLGAVQKAGGYAKYELADDCSFKRAFWATQDQVERAMEFGLDVIQQDCTLGTNKYGLALSIIVGVNGDSKTRMFCQALLEREDTEAFSW---FFVHYVKMVGGHYPFVCFTDRLSSQAIGVKAQACERNQQCKYAGYKLYQEARHIAAQEMFRSLMQ--------RASRAPTEASFQGAWKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTRRCEGYFGILK 459          
BLAST of mRNA_P-wetherbeei_contig5438.2.1 vs. uniprot
Match: A0A835Z0Q7_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Q7_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.680e-17
Identity = 76/243 (31.28%), Postives = 110/243 (45.27%), Query Frame = 1
Query:   73 DGSQFLDYLKGQQRMAFDWLYDPVDRC-IRCIIWATAAQIMASMKYS-DVVLQDCTFGTNQFGILLCLFIGVDCNMR-----YAVLEREDTAGMIWAFEWFIHNCCPPGVHPVTWLTDGCAAAAAAIMKVCPSSHHFLCSWHLWKNIKHTDQRMRGESLLRDAIKTAFRKAEYSLSEASFRAAW-GSLEKLLDVPAVPDQLRRYFA-RLYTDRGRWAFCYRSRAFTLSLSATSRVEGTFAALK 774
            D  +F+  L   Q+      Y+  D C  +   WAT  Q+  +M++  DV+ QDCTFGTN++G+ L + +GV+ + +      A+LEREDT     AF WF        VH V  +                  H+                     S+ R  ++ A R      +EASF+ AW G L+ L+D  A  D + +Y    +Y  R RWAFCYR    TL +++T R EG F  LK
Sbjct:   48 DCQEFIKQLGAVQKAGGYAEYELADDCSFKRAFWATQDQVERAMEFGLDVIQQDCTFGTNKYGLALSIIVGVNGDSKTRMFCQALLEREDTE----AFSWFF-------VHYVKMV----------------GGHY--------------------PSMFRSLMQRALRAP----TEASFQGAWKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILK 239          
BLAST of mRNA_P-wetherbeei_contig5438.2.1 vs. uniprot
Match: A0A836CA74_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA74_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 9.010e-17
Identity = 76/243 (31.28%), Postives = 110/243 (45.27%), Query Frame = 1
Query:   73 DGSQFLDYLKGQQRMAFDWLYDPVDRC-IRCIIWATAAQIMASMKYS-DVVLQDCTFGTNQFGILLCLFIGVDCNMR-----YAVLEREDTAGMIWAFEWFIHNCCPPGVHPVTWLTDGCAAAAAAIMKVCPSSHHFLCSWHLWKNIKHTDQRMRGESLLRDAIKTAFRKAEYSLSEASFRAAW-GSLEKLLDVPAVPDQLRRYFA-RLYTDRGRWAFCYRSRAFTLSLSATSRVEGTFAALK 774
            D  +F+  L   Q+      Y+  D C  +   WAT  Q+  +M++  DV+ QDCTFGTN++G+ L + +GV+ + +      A+LEREDT     AF WF        VH V  +                  H+                     S+ R  ++ A R      +EASF+ AW G L+ L+D  A  D + +Y    +Y  R RWAFCYR    TL +++T R EG F  LK
Sbjct:  173 DCQEFIKQLGAVQKAGGYAEYELADDCSFKRAFWATQDQVERAMEFGLDVIQQDCTFGTNKYGLALSIIVGVNGDSKTRMFCQALLEREDTE----AFSWFF-------VHYVKMV----------------GGHY--------------------PSMFRSLMQRASRAP----TEASFQGAWKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTRRCEGYFGILK 364          
BLAST of mRNA_P-wetherbeei_contig5438.2.1 vs. uniprot
Match: UPI0009013684 (protein FAR1-RELATED SEQUENCE 7-like n=1 Tax=Ipomoea nil TaxID=35883 RepID=UPI0009013684)

HSP 1 Score: 87.4 bits (215), Expect = 4.170e-14
Identity = 63/249 (25.30%), Postives = 109/249 (43.78%), Query Frame = 1
Query:   70 TDGSQFLDYLKGQQRMAFDWLYD---PVDRCIRCIIWATAAQIMASMKYSDVVLQDCTFGTNQFGILLCLFIGVD---CNMRYAV--LEREDTAGMIWAFEWFIHNCCPPGVHPVTWLTDGCAAAAAAIMKVCPSSHHFLCSWHLWKNIKHTDQRMRGESLLRDAIKTAFRKAEYSLSEASFRAAWGSLEKLLDVPAVPDQLRRYFARLYTDRGRWAFCYRSRAFTLSLSATSRVEGTFAALKRLLRGT 792
            TD +  ++  + +Q    D+ +D    +D  +    W           + D+++ D T+ TN++ ++   F+G++    N+ +    L  E     +W F+ F  +    G  P T +TD CAA AAAI KV P+S H LC WH+ +N K   + +R      D      +   Y+ +EA F+  W  L     V         +  +LY  R +W   +    F+  + ++ R E T  ++ R L  T
Sbjct:  297 TDSNSLIEIFRRRQSTETDFFFDFELDLDARLCIFFWRDGQMRRDYEVFGDLLVHDTTYRTNKYDMICAPFVGMNHHCMNVMFGCGFLMNERIESFVWLFKVFSRSM--GGKSPQTIMTDQCAAMAAAISKVFPTSRHRLCIWHIGENSKKHIKTLRSNKDFLDMFNYVLK---YTETEAEFQFYWTRL-----VTDYKCHKNTWLEKLYDCREKWCPAFNKDYFSGGILSSQRSETTNHSISRRLSKT 535          
BLAST of mRNA_P-wetherbeei_contig5438.2.1 vs. uniprot
Match: UPI000900FE6D (protein FAR1-RELATED SEQUENCE 7-like n=2 Tax=Ipomoea nil TaxID=35883 RepID=UPI000900FE6D)

HSP 1 Score: 87.0 bits (214), Expect = 6.700e-14
Identity = 63/249 (25.30%), Postives = 109/249 (43.78%), Query Frame = 1
Query:   70 TDGSQFLDYLKGQQRMAFDWLYD---PVDRCIRCIIWATAAQIMASMKYSDVVLQDCTFGTNQFGILLCLFIGVD---CNMRYAV--LEREDTAGMIWAFEWFIHNCCPPGVHPVTWLTDGCAAAAAAIMKVCPSSHHFLCSWHLWKNIKHTDQRMRGESLLRDAIKTAFRKAEYSLSEASFRAAWGSLEKLLDVPAVPDQLRRYFARLYTDRGRWAFCYRSRAFTLSLSATSRVEGTFAALKRLLRGT 792
            TD +  ++  + +Q    D+ +D    +D  +    W           + D+++ D T+ TN++ ++   F+G++    N+ +    L  E     +W F+ F  +    G  P T +TD CAA AAAI KV P+S H LC WH+ +N K   + +R      D      +   Y+ +EA F+  W  L     V         +  +LY  R +W   +    F+  + ++ R E T  ++ R L  T
Sbjct:  418 TDSNSLIEIFRRRQSTETDFFFDFELDLDARLCSFFWRDGQMRRDYEVFGDLLVHDTTYRTNKYDMICAPFVGMNHHCMNVMFGCGFLMNERIESFLWLFKVFSRSM--GGKSPQTIMTDQCAAMAAAISKVFPTSRHRLCIWHIGENSKKHIKTLRSNKDFLDMFNYVLK---YTETEAEFQFYWTRL-----VTDYKCHKNTWLEKLYDCREKWCPAFNKDYFSGGILSSQRSETTNHSISRRLSKT 656          
BLAST of mRNA_P-wetherbeei_contig5438.2.1 vs. uniprot
Match: UPI00090109E0 (protein FAR1-RELATED SEQUENCE 12-like n=1 Tax=Ipomoea nil TaxID=35883 RepID=UPI00090109E0)

HSP 1 Score: 85.1 bits (209), Expect = 1.470e-13
Identity = 63/252 (25.00%), Postives = 109/252 (43.25%), Query Frame = 1
Query:   70 TDGSQFLDYLKGQQRMAFDWLYD---PVDRCIRCIIWATAAQIMASMKYSDVVLQDCTFGTNQFGILLCLFIGVD---CNMRYAV--LEREDTAGMIWAFEWFIHNC---CPPGVHPVTWLTDGCAAAAAAIMKVCPSSHHFLCSWHLWKNIKHTDQRMRGESLLRDAIKTAFRKAEYSLSEASFRAAWGSLEKLLDVPAVPDQLRRYFARLYTDRGRWAFCYRSRAFTLSLSATSRVEGTFAALKRLLRGT 792
            TD +  ++  + +Q    D+ +D    +D  +    W           + D+V+ D T+ TN++ ++   F+G++    N+ +    L  E     +W F+ F+ +    CP      T +TD CAA AAAI  V P+S H LC WH+ +N K   + +R      D      +   Y+ +EA F+  W  L     V         +  +LY  R +W   +    F+  + ++ R E T  ++ R L  T
Sbjct:  219 TDSNSLIEIFRRRQSTETDFFFDFELDLDARLCSFFWRDGQMRRDYELFGDLVVHDTTYRTNKYDMICGPFVGMNHHCMNVMFGCGFLMNERIESFVWLFKAFLRSMGCKCPQ-----TIMTDQCAAMAAAISTVFPTSRHRLCIWHIGENSKKHIKMLRNNKDFLDMFNYVLK---YTETEAEFQFYWTRL-----VTDYKCHKNTWLEKLYDSREKWCTAFNKDYFSGGILSSQRSETTNHSISRRLSKT 457          
BLAST of mRNA_P-wetherbeei_contig5438.2.1 vs. uniprot
Match: A0A397GQN3_9GLOM (SWIM-type domain-containing protein n=2 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397GQN3_9GLOM)

HSP 1 Score: 85.5 bits (210), Expect = 1.940e-13
Identity = 93/351 (26.50%), Postives = 149/351 (42.45%), Query Frame = 1
Query:   16 YQVKNLINGVRATQK--DLSTDGSQFLDYLKGQQRMAFDWLYD---PVDRCIRCIIWATAAQIMASMKYSDVVLQDCTFGTNQFGILLCLFIGVD--CNMRY---AVLEREDTAGMIWAFEWFIHNCCPPGVH--PVTWLTDGCAAAAAAIMKVCPSSHHFLCSWHLWKNIKHTDQRMRGESLLRDAIKTAFRKAEYSLSEASFRAAWGSLEKLLDVPAVPDQLRRYFARLYTDRGRWAFCYRSRAFTLSLSATSRVEGTFAALKRLLRGTVRGLSWLGQHLTALSLEKALKELYEAAKGRWGHLGSLPGWLPSHFPDVLGFVDTRGSVWLQSFIRGEMSRAPAYKVTPIN 1032
            +Q ++L N ++  +    ++ D S  L  L  ++     W+ D     +  +  ++W +  QI   +KY DVV+ D T  TNQ+ +LL +FI +D  C  R    A++  E     +W  E     C        P+   TD   A  AAI  V P ++   C +H+ +N+    +   GE    D IK  F +   SL E  F+  W  L  L D PA  D L R   R   +   WA  Y  + FT  + +TSR+EG    +K+ L+        +    + L  E+   + YE  +    ++ S  G     F  +   +D   +  + + IR EMS+        IN
Sbjct:  257 FQDQDLANAIQKYKNINKINNDASTLLTSLLQKKIEDLRWVVDFELDKENQLTRLLWMSPDQIDLWLKYYDVVVNDNTAKTNQYQMLLGIFIIIDNKCKTRLVCQALVSDETLDTHVWILE-----CIRKATEQAPIVMFTDANPALDAAIPIVFPETYPAHCIFHIAQNLPKNLKGKLGERW-NDFIKQ-FYQCRNSLCEPLFKQRWNQL--LNDFPASKDYLLRTLGR---NCRSWARAYLYKIFTAGIESTSRIEGYNWVIKQQLKTNSTLCELVDCLDSRLKEEERWNQFYEYKQITTSNIVSTVG--QDLFLTITKVLDKYLTEPIYNIIRAEMSQCLFVNANIIN 593          
BLAST of mRNA_P-wetherbeei_contig5438.2.1 vs. uniprot
Match: UPI000901282C (protein FAR1-RELATED SEQUENCE 7-like n=13 Tax=Ipomoea nil TaxID=35883 RepID=UPI000901282C)

HSP 1 Score: 84.7 bits (208), Expect = 3.190e-13
Identity = 62/249 (24.90%), Postives = 108/249 (43.37%), Query Frame = 1
Query:   70 TDGSQFLDYLKGQQRMAFDWLYD---PVDRCIRCIIWATAAQIMASMKYSDVVLQDCTFGTNQFGILLCLFIGVD---CNMRYAV--LEREDTAGMIWAFEWFIHNCCPPGVHPVTWLTDGCAAAAAAIMKVCPSSHHFLCSWHLWKNIKHTDQRMRGESLLRDAIKTAFRKAEYSLSEASFRAAWGSLEKLLDVPAVPDQLRRYFARLYTDRGRWAFCYRSRAFTLSLSATSRVEGTFAALKRLLRGT 792
            TD +  ++  + +Q    D+ +D    +D  +    W           + D+++ D T+ TN++ ++   F+G++    N+ +    L  E     +W F+ F  +       P T +TD CAA AAAI KV P+S H LC WH+ +N K   + +R      D      +   Y+ +EA F+  W  L     V         +  +LY  R +W   +    F+  + ++ R E T  ++ R L  T
Sbjct:  287 TDSNSLIEIFRRRQSTETDFFFDFELDLDARLCSFFWRDGQMRRDYEVFGDLLVHDTTYRTNKYDMICAPFVGMNHHCMNVMFGCGFLMNERIESFVWLFKVFSRSMGDKS--PQTIMTDQCAAMAAAISKVFPTSRHRLCIWHIGENSKKHIKTLRSNKDFLDMFNYVLK---YTETEAEFQFYWTRL-----VTDYKCHKNTWLEKLYDCREKWCPAFNKDYFSGGILSSQRSETTNHSISRRLSKT 525          
BLAST of mRNA_P-wetherbeei_contig5438.2.1 vs. uniprot
Match: UPI000901AA63 (protein FAR1-RELATED SEQUENCE 7-like n=6 Tax=Ipomoea nil TaxID=35883 RepID=UPI000901AA63)

HSP 1 Score: 83.6 bits (205), Expect = 6.870e-13
Identity = 60/249 (24.10%), Postives = 109/249 (43.78%), Query Frame = 1
Query:   70 TDGSQFLDYLKGQQRMAFDWLYD---PVDRCIRCIIWATAAQIMASMKYSDVVLQDCTFGTNQFGILLCLFIGVD---CNMRYAV--LEREDTAGMIWAFEWFIHNCCPPGVHPVTWLTDGCAAAAAAIMKVCPSSHHFLCSWHLWKNIKHTDQRMRGESLLRDAIKTAFRKAEYSLSEASFRAAWGSLEKLLDVPAVPDQLRRYFARLYTDRGRWAFCYRSRAFTLSLSATSRVEGTFAALKRLLRGT 792
            TD +  ++  K +Q    D+ +D    ++  +    W           + D+++ D T+ TN++ ++   F+G +    N+ +    L  E     +W F+ F+ +       P + +TD CAA AAAI++V PSS H LC WH+ +N K   + +R +    D      +   Y+ +EA F   W  +     V         +  +LY  R +W   +    F+  + ++ R E T  ++ R L  T
Sbjct:  204 TDSNTLIEIFKRRQSSERDFYFDFEVDLESRLCSFFWRDGRMRRDYDLFGDLLVHDTTYRTNKYDMICGTFVGTNNHCMNVMFGCGFLMNEKIESFVWLFKTFLRSM--DYKSPQSIMTDQCAAMAAAIVQVFPSSRHRLCIWHIGENSKKHIKGLRNQKDFLDIFNCLLK---YTDTEAEFEFYWTRM-----VTTYKCHNNHWIEKLYGCREKWCLAFNKDYFSGGILSSQRSETTNHSISRRLSKT 442          
BLAST of mRNA_P-wetherbeei_contig5438.2.1 vs. uniprot
Match: UPI0009017451 (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Ipomoea nil TaxID=35883 RepID=UPI0009017451)

HSP 1 Score: 82.4 bits (202), Expect = 7.700e-13
Identity = 60/249 (24.10%), Postives = 110/249 (44.18%), Query Frame = 1
Query:   70 TDGSQFLDYLKGQQRMAFDWLYD---PVDRCIRCIIWATAAQIMASMKYSDVVLQDCTFGTNQFGILLCLFIGVD---CNMRYAV--LEREDTAGMIWAFEWFIHNCCPPGVHPVTWLTDGCAAAAAAIMKVCPSSHHFLCSWHLWKNIKHTDQRMRGESLLRDAIKTAFRKAEYSLSEASFRAAWGSLEKLLDVPAVPDQLRRYFARLYTDRGRWAFCYRSRAFTLSLSATSRVEGTFAALKRLLRGT 792
            TD +  ++  K +Q    D+ +D    ++  +    W           + D+++ D T+ TN++ ++   F+G++    N+ +    L  E     +W F+ F+ +       P + +TD CAA AAAI++V PSS H LC WH+ +N K   + +R +    D      +   Y+ +EA F   W  +     V         +  +LY  R +W   +    F+  + ++ R E T  ++ R L  T
Sbjct:  101 TDSNTLIEIFKRRQSSEIDFYFDFEVDLESRLCSFFWRDGRMRRDYDLFGDLLVHDTTYRTNKYDMICGPFVGMNNHCMNVMFGCGFLMNEKIESFVWLFKTFLRSM--DYKSPQSIMTDQCAAMAAAIVQVFPSSRHRLCIWHIGENSKKHIKGLRNQKDFLDIFNCLLK---YTDTEAEFEFYWTRM-----VTTYKCHNNHWIEKLYGCREKWCPAFSKDYFSGGILSSERSETTNHSISRRLSKT 339          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5438.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z7W2_9STRA8.920e-2231.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z0Q7_9STRA2.680e-1731.28SWIM-type domain-containing protein n=1 Tax=Tribon... [more]
A0A836CA74_9STRA9.010e-1731.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI00090136844.170e-1425.30protein FAR1-RELATED SEQUENCE 7-like n=1 Tax=Ipomo... [more]
UPI000900FE6D6.700e-1425.30protein FAR1-RELATED SEQUENCE 7-like n=2 Tax=Ipomo... [more]
UPI00090109E01.470e-1325.00protein FAR1-RELATED SEQUENCE 12-like n=1 Tax=Ipom... [more]
A0A397GQN3_9GLOM1.940e-1326.50SWIM-type domain-containing protein n=2 Tax=Divers... [more]
UPI000901282C3.190e-1324.90protein FAR1-RELATED SEQUENCE 7-like n=13 Tax=Ipom... [more]
UPI000901AA636.870e-1324.10protein FAR1-RELATED SEQUENCE 7-like n=6 Tax=Ipomo... [more]
UPI00090174517.700e-1324.10protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Ipomo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5438contigP-wetherbeei_contig5438:566..3237 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FLF6
PFAMsMULE
Model size2126
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.55e-24
EggNOG OGs2CMGX@1|root,2QQB8@2759|Eukaryota
Cds size1881
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186812.614808-UTR-P-wetherbeei_contig5438:565..5771683186812.614808-UTR-P-wetherbeei_contig5438:565..577Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5438 566..577 +
1683186812.6553032-UTR-P-wetherbeei_contig5438:3004..32371683186812.6553032-UTR-P-wetherbeei_contig5438:3004..3237Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5438 3005..3237 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186812.6249561-CDS-P-wetherbeei_contig5438:577..8651683186812.6249561-CDS-P-wetherbeei_contig5438:577..865Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5438 578..865 +
1683186812.634398-CDS-P-wetherbeei_contig5438:1083..14071683186812.634398-CDS-P-wetherbeei_contig5438:1083..1407Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5438 1084..1407 +
1683186812.6449926-CDS-P-wetherbeei_contig5438:1735..30041683186812.6449926-CDS-P-wetherbeei_contig5438:1735..3004Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5438 1736..3004 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5438.2.1prot_P-wetherbeei_contig5438.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5438 578..3004 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5438.2.1

>prot_P-wetherbeei_contig5438.2.1 ID=prot_P-wetherbeei_contig5438.2.1|Name=mRNA_P-wetherbeei_contig5438.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=627bp
MYQVKNLINGVRATQKDLSTDGSQFLDYLKGQQRMAFDWLYDPVDRCIRC
IIWATAAQIMASMKYSDVVLQDCTFGTNQFGILLCLFIGVDCNMRYAVLE
REDTAGMIWAFEWFIHNCCPPGVHPVTWLTDGCAAAAAAIMKVCPSSHHF
LCSWHLWKNIKHTDQRMRGESLLRDAIKTAFRKAEYSLSEASFRAAWGSL
EKLLDVPAVPDQLRRYFARLYTDRGRWAFCYRSRAFTLSLSATSRVEGTF
AALKRLLRGTVRGLSWLGQHLTALSLEKALKELYEAAKGRWGHLGSLPGW
LPSHFPDVLGFVDTRGSVWLQSFIRGEMSRAPAYKVTPINATSSLGVAAA
GAVACLVGLPPAGATAIGSVPTSAGGDTGFIAMSTANDAAAAEATEAAAA
AAAADSAATFNAADVAAGDPDNSADTETDGTLPPDDRARLDPNDVLLAFT
GMPSIVAQFKVEPRTAGGAKSCNVVVCMSDGTHLCSCTLVVRQGVPCRHF
FACRIDSGLEKTPFAPSIINVRYLDDRFRGGRDSNGATTQAASDAASSVS
TSRTGGSTGGSVGGTAAGDVEAASAVASTAAAATSAVASAADADAAAGWD
NFVSSVAALVLGAPHPPPSLLDTWLW*
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mRNA from alignment at P-wetherbeei_contig5438:566..3237+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5438.2.1 ID=mRNA_P-wetherbeei_contig5438.2.1|Name=mRNA_P-wetherbeei_contig5438.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2672bp|location=Sequence derived from alignment at P-wetherbeei_contig5438:566..3237+ (Phaeothamnion wetherbeei SAG_119_79)
CACAACGTAATCATGTACCAGGTGAAAAACCTTATTAACGGCGTTCGGGC GACGCAAAAGGACCTCAGCACAGACGGGTCTCAATTCCTCGACTACTTAA AGGGCCAGCAAAGGATGGCATTCGACTGGCTCTACGACCCTGTCGATCGC TGCATTCGATGCATCATTTGGGCGACCGCGGCGCAGATAATGGCCTCGAT GAAGTACAGCGATGTCGTGCTCCAGGACTGCACCTTCGGCACGAATCAGT TTGGTATCCTCCTCTGCCTCTTCATCGGCGTTGACTGCAACATGAGGTAC GTTCGTTGGCACTGCCTGCCGGCGTTTGAGCAACAAATTTGCCCTCCATT TCGGGTTTTCTAAGCGGAATAAATACGGGATTCGTGCGGGAAAACAAGAC AAACCGACGCCTCCACTTGCAATTTCTCGCTTTGAAAGTTTGCCCATTTT TCGCTTTTCTGTGTGCCGCCGCGGGGGGGGGGGGGGTCATTGAATGCAAA ACGGTGATTTTGGCGCAGGCTGTGCTGGAGCGGGAGGACACGGCGGGCAT GATTTGGGCATTCGAGTGGTTCATCCACAACTGCTGTCCGCCTGGGGTGC ATCCCGTGACCTGGCTTACAGACGGATGCGCGGCGGCAGCAGCTGCTATC ATGAAGGTGTGCCCGAGCAGCCATCACTTCCTCTGCTCATGGCATCTTTG GAAAAATATCAAGCACACTGACCAGCGGATGCGCGGCGAATCTTTGCTGA GGGATGCCATCAAGACCGCCTTTCGTAAGGCGGAGTACAGCTTGAGCGAG GCGTCGTTCAGGGCGGCATGGGGCAGTTTGGAAAAGCTTTTGGTGAGTGA GTGCGGGTGCCGAGCGACACCAGCTTGCTTCCGAGTTGCTGGCTCTGATT CAGGGGCTATGTAGTATATTTACCGCGCCCGTCCGACCGTTCGGCCAGCA CCCTATCCTTTTCCAGGGGCAGGGCTTGGCCATGCTGAGGGCCGTTCTTT TAGAAGGCCTGCCCCAGCGGAAGAATCCACGCCTGGCAGGGCTTTTCTTC GGAAGACTCCCCTCCTTGTCTGTGAATCGTTCCTTCAAATGTCTTCCACG ATTCTCGGCGACGGTATGATTCTGATGTCCCCTTGCTCGCTTCGTCCTTT CCTTGTTTCGTCTCCACCAGGACGTGCCGGCGGTGCCCGACCAGCTACGG AGATATTTCGCTCGACTTTACACCGACCGCGGCCGCTGGGCCTTCTGCTA CCGCAGTCGTGCTTTCACGTTGTCTCTGTCGGCAACCTCACGTGTGGAGG GCACTTTCGCAGCATTGAAGAGGCTGCTTCGGGGTACCGTGCGCGGCCTT TCTTGGCTGGGACAGCACCTCACCGCGCTATCTCTGGAGAAAGCGCTGAA GGAGCTTTACGAGGCGGCGAAAGGGCGGTGGGGACACCTCGGCAGCCTGC CTGGCTGGCTGCCGAGCCATTTCCCTGATGTCTTGGGCTTCGTGGACACA CGCGGCTCTGTATGGCTGCAGAGCTTTATTCGGGGGGAGATGAGCCGCGC TCCCGCATACAAAGTGACGCCGATCAATGCCACCTCGTCTCTGGGAGTTG CAGCGGCTGGTGCGGTGGCTTGCCTTGTGGGGTTGCCTCCAGCCGGCGCC ACGGCAATTGGAAGCGTTCCTACATCAGCAGGCGGCGACACGGGATTCAT CGCCATGAGTACTGCCAACGATGCGGCAGCTGCGGAGGCAACTGAGGCGG CGGCGGCGGCCGCAGCGGCAGACTCAGCAGCCACGTTCAATGCTGCCGAC GTCGCTGCAGGGGACCCCGACAACAGTGCCGACACGGAGACGGACGGGAC CCTGCCGCCTGACGACAGGGCTCGGCTCGACCCCAACGACGTCTTGCTGG CCTTCACCGGAATGCCAAGCATCGTGGCGCAGTTCAAGGTCGAGCCAAGA ACCGCGGGCGGGGCCAAGTCGTGCAACGTCGTCGTCTGTATGAGCGACGG GACCCATTTGTGTTCCTGCACGCTCGTGGTGCGGCAAGGGGTGCCCTGCC GCCATTTCTTCGCCTGCCGCATCGACTCTGGCCTGGAGAAGACGCCGTTT GCGCCTTCTATCATCAACGTGCGCTACTTGGACGACAGATTTCGAGGAGG ACGCGATAGTAACGGCGCTACAACACAGGCTGCCAGTGATGCCGCTTCTT CTGTCAGTACTAGCAGGACAGGCGGCAGTACGGGCGGCTCCGTCGGAGGG ACGGCGGCCGGGGATGTGGAGGCAGCTTCGGCGGTGGCGTCGACTGCGGC GGCGGCTACATCGGCGGTAGCGTCGGCTGCAGATGCGGACGCCGCAGCAG GATGGGATAACTTCGTCTCATCCGTCGCTGCCCTGGTGCTGGGAGCACCC CATCCCCCGCCGTCATTGCTTGACACTTGGTTGTGGTAGGCCGGGGGCGT TCGTTGCCGGTTCGTTTCACAAAACCCACAGGCTCACTAACCTCTGGAGA GTCGGCCTTCAGTCGCTCGGCACGCACGGGTTCACGCCCTCGGCCCGCAG GGGATGAGGAGTGTTGTCGACGCCATTGTTGTAGGCCAGACTATGGCCGA ATCAGACTGAAGGTTGCTTGCGTAGAAGACTCTGATAGATTAACATGCAC AAATACACTAGAACAATGCTGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5438:566..3237+

>mRNA_P-wetherbeei_contig5438.2.1 ID=mRNA_P-wetherbeei_contig5438.2.1|Name=mRNA_P-wetherbeei_contig5438.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1881bp|location=Sequence derived from alignment at P-wetherbeei_contig5438:566..3237+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTACCAGGTGAAAAACCTTATTAACGGCGTTCGGGCGACGCAAAAGGA
CCTCAGCACAGACGGGTCTCAATTCCTCGACTACTTAAAGGGCCAGCAAA
GGATGGCATTCGACTGGCTCTACGACCCTGTCGATCGCTGCATTCGATGC
ATCATTTGGGCGACCGCGGCGCAGATAATGGCCTCGATGAAGTACAGCGA
TGTCGTGCTCCAGGACTGCACCTTCGGCACGAATCAGTTTGGTATCCTCC
TCTGCCTCTTCATCGGCGTTGACTGCAACATGAGGTACGCTGTGCTGGAG
CGGGAGGACACGGCGGGCATGATTTGGGCATTCGAGTGGTTCATCCACAA
CTGCTGTCCGCCTGGGGTGCATCCCGTGACCTGGCTTACAGACGGATGCG
CGGCGGCAGCAGCTGCTATCATGAAGGTGTGCCCGAGCAGCCATCACTTC
CTCTGCTCATGGCATCTTTGGAAAAATATCAAGCACACTGACCAGCGGAT
GCGCGGCGAATCTTTGCTGAGGGATGCCATCAAGACCGCCTTTCGTAAGG
CGGAGTACAGCTTGAGCGAGGCGTCGTTCAGGGCGGCATGGGGCAGTTTG
GAAAAGCTTTTGGACGTGCCGGCGGTGCCCGACCAGCTACGGAGATATTT
CGCTCGACTTTACACCGACCGCGGCCGCTGGGCCTTCTGCTACCGCAGTC
GTGCTTTCACGTTGTCTCTGTCGGCAACCTCACGTGTGGAGGGCACTTTC
GCAGCATTGAAGAGGCTGCTTCGGGGTACCGTGCGCGGCCTTTCTTGGCT
GGGACAGCACCTCACCGCGCTATCTCTGGAGAAAGCGCTGAAGGAGCTTT
ACGAGGCGGCGAAAGGGCGGTGGGGACACCTCGGCAGCCTGCCTGGCTGG
CTGCCGAGCCATTTCCCTGATGTCTTGGGCTTCGTGGACACACGCGGCTC
TGTATGGCTGCAGAGCTTTATTCGGGGGGAGATGAGCCGCGCTCCCGCAT
ACAAAGTGACGCCGATCAATGCCACCTCGTCTCTGGGAGTTGCAGCGGCT
GGTGCGGTGGCTTGCCTTGTGGGGTTGCCTCCAGCCGGCGCCACGGCAAT
TGGAAGCGTTCCTACATCAGCAGGCGGCGACACGGGATTCATCGCCATGA
GTACTGCCAACGATGCGGCAGCTGCGGAGGCAACTGAGGCGGCGGCGGCG
GCCGCAGCGGCAGACTCAGCAGCCACGTTCAATGCTGCCGACGTCGCTGC
AGGGGACCCCGACAACAGTGCCGACACGGAGACGGACGGGACCCTGCCGC
CTGACGACAGGGCTCGGCTCGACCCCAACGACGTCTTGCTGGCCTTCACC
GGAATGCCAAGCATCGTGGCGCAGTTCAAGGTCGAGCCAAGAACCGCGGG
CGGGGCCAAGTCGTGCAACGTCGTCGTCTGTATGAGCGACGGGACCCATT
TGTGTTCCTGCACGCTCGTGGTGCGGCAAGGGGTGCCCTGCCGCCATTTC
TTCGCCTGCCGCATCGACTCTGGCCTGGAGAAGACGCCGTTTGCGCCTTC
TATCATCAACGTGCGCTACTTGGACGACAGATTTCGAGGAGGACGCGATA
GTAACGGCGCTACAACACAGGCTGCCAGTGATGCCGCTTCTTCTGTCAGT
ACTAGCAGGACAGGCGGCAGTACGGGCGGCTCCGTCGGAGGGACGGCGGC
CGGGGATGTGGAGGCAGCTTCGGCGGTGGCGTCGACTGCGGCGGCGGCTA
CATCGGCGGTAGCGTCGGCTGCAGATGCGGACGCCGCAGCAGGATGGGAT
AACTTCGTCTCATCCGTCGCTGCCCTGGTGCTGGGAGCACCCCATCCCCC
GCCGTCATTGCTTGACACTTGGTTGTGGTAG
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