mRNA_P-wetherbeei_contig5437.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5437.1.1
Unique NamemRNA_P-wetherbeei_contig5437.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig5437.1.1 vs. uniprot
Match: D7G645_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G645_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 5.430e-14
Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 1 
Query:   31 ESEQMRSTCDACTRSKIKCEGGLPCARCNRRKVECVYTEKRRCGPKRKK 177
            +   +R+TCDACT  KIKC+GG PC RC RR  ECVY EK+RCGPKR+K
Sbjct:   49 DENNLRTTCDACTIGKIKCDGGHPCKRCQRRGSECVYREKKRCGPKRRK 97
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BLAST of mRNA_P-wetherbeei_contig5437.1.1 vs. uniprot
Match: A0A6H5J8L2_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8L2_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 5.460e-14
Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 1 
Query:   31 ESEQMRSTCDACTRSKIKCEGGLPCARCNRRKVECVYTEKRRCGPKRKK 177
            +   +R+TCDACT  KIKC+GG PC RC RR  ECVY EK+RCGPKR+K
Sbjct:  175 DENNLRTTCDACTIGKIKCDGGHPCKRCQRRGSECVYREKKRCGPKRRK 223
[Close]
BLAST of mRNA_P-wetherbeei_contig5437.1.1 vs. uniprot
Match: D7G644_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G644_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 6.860e-14
Identity = 32/49 (65.31%), Postives = 37/49 (75.51%), Query Frame = 1 
Query:   31 ESEQMRSTCDACTRSKIKCEGGLPCARCNRRKVECVYTEKRRCGPKRKK 177
            +    R+TCDACT  KIKC+GG PC RC RR  ECVY EK+RCGPKR+K
Sbjct:   51 DENNFRTTCDACTLGKIKCDGGHPCRRCQRRGSECVYREKKRCGPKRRK 99
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BLAST of mRNA_P-wetherbeei_contig5437.1.1 vs. uniprot
Match: A0A6H5JIQ1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIQ1_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 2.050e-11
Identity = 26/45 (57.78%), Postives = 36/45 (80.00%), Query Frame = 1 
Query:   43 MRSTCDACTRSKIKCEGGLPCARCNRRKVECVYTEKRRCGPKRKK 177
            +R+TCDACT +K+KC G  PC RC+ + ++C YT K+RCGPKR+K
Sbjct:   27 LRTTCDACTSAKVKCNGEKPCVRCSNKNIQCEYTFKKRCGPKRRK 71
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BLAST of mRNA_P-wetherbeei_contig5437.1.1 vs. uniprot
Match: A0A6H5K1B7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1B7_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.340e-10
Identity = 24/47 (51.06%), Postives = 35/47 (74.47%), Query Frame = 1 
Query:   28 GESEQMRSTCDACTRSKIKCEGGLPCARCNRRKVECVYTEKRRCGPK 168
            G    +R +CD CT SK KC+G +PC RC +R++EC ++++RRCGPK
Sbjct:   18 GSRGPLRKSCDTCTSSKTKCQGSIPCDRCKKRRIECKFSKRRRCGPK 64
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BLAST of mRNA_P-wetherbeei_contig5437.1.1 vs. uniprot
Match: A0A835YRF7_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRF7_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 8.710e-10
Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 1 
Query:   19 AADGESE-QMRSTCDACTRSKIKCEGGLPCARCNRRKVECVYTEKRRCGP 165
            A +G  E  +R+TCD CT SK++C G  PCARC RR  ECVY+EKRR  P
Sbjct:   74 AGEGRGEWNLRTTCDGCTVSKVRCNGKKPCARCERRNEECVYSEKRRQKP 123
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BLAST of mRNA_P-wetherbeei_contig5437.1.1 vs. uniprot
Match: A0A836CK64_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK64_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 5.660e-9
Identity = 29/51 (56.86%), Postives = 36/51 (70.59%), Query Frame = 1 
Query:   22 ADGESEQMRSTCDACTRSKIKCEGGLPCARCNRRKVECVYTEKRRCGPKRK 174
            ++ E E MRS CD+CT SKI+C GG PC RC +R  +    EKRRCGPK+K
Sbjct:   56 SNSEDENMRSACDSCTFSKIRCVGGRPCERCRKRGKD----EKRRCGPKKK 102
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BLAST of mRNA_P-wetherbeei_contig5437.1.1 vs. uniprot
Match: A0A7S2WSH6_9STRA (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A7S2WSH6_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 3.680e-8
Identity = 22/44 (50.00%), Postives = 35/44 (79.55%), Query Frame = 1 
Query:   43 MRSTCDACTRSKIKCEGGLPCARCNRRKVECVYTEKRRCGPKRK 174
            ++S+CDACT SK+KC GG PCARC ++ ++C Y+ +++ GP +K
Sbjct:    8 LKSSCDACTESKVKCSGGDPCARCVKKGIQCFYSPRKKRGPLKK 51
[Close]
BLAST of mRNA_P-wetherbeei_contig5437.1.1 vs. uniprot
Match: W7EX36_COCVI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Bipolaris victoriae FI3 TaxID=930091 RepID=W7EX36_COCVI)

HSP 1 Score: 56.2 bits (134), Expect = 1.260e-7
Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 1 
Query:   16 FAADGESEQMRSTCDACTRSKIKCEGGLPCARCNRRKVECVYTEKRRCG 162
              A  ++ ++RS CD+C R+K++C GGLPCARC      CVY+   R G
Sbjct:   31 IVASSKARKLRSACDSCHRAKVRCSGGLPCARCREFATNCVYSTSARTG 79
[Close]
BLAST of mRNA_P-wetherbeei_contig5437.1.1 vs. uniprot
Match: A0A8H5MZW7_9HYPO (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Fusarium napiforme TaxID=42672 RepID=A0A8H5MZW7_9HYPO)

HSP 1 Score: 55.8 bits (133), Expect = 1.740e-7
Identity = 25/48 (52.08%), Postives = 35/48 (72.92%), Query Frame = 1 
Query:   40 QMRSTCDACTRSKIKCEGGLP-CARCNRRKVECVYTEKRRCGPKRKKP 180
            ++RS CD+CT+SK+KC G +P C RC  R ++CVY++ RR G  R KP
Sbjct:    5 RLRSCCDSCTKSKVKCSGEMPSCQRCRMRGLDCVYSQARRAGRPRLKP 52
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5437.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G645_ECTSI5.430e-1465.31Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5J8L2_9PHAE5.460e-1465.31Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7G644_ECTSI6.860e-1465.31Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5JIQ1_9PHAE2.050e-1157.78Zn(2)-C6 fungal-type domain-containing protein n=2... [more]
A0A6H5K1B7_9PHAE1.340e-1051.06Zn(2)-C6 fungal-type domain-containing protein (Fr... [more]
A0A835YRF7_9STRA8.710e-1058.00Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A836CK64_9STRA5.660e-956.86Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A7S2WSH6_9STRA3.680e-850.00Hypothetical protein n=2 Tax=Sar TaxID=2698737 Rep... [more]
W7EX36_COCVI1.260e-744.90Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A8H5MZW7_9HYPO1.740e-752.08Zn(2)-C6 fungal-type domain-containing protein n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5437contigP-wetherbeei_contig5437:225..419 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog5022.CBX98936
PFAMsZn_clus
Model size195
Max annot lvl4751|Fungi
KEGG koko:K21546
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.82e-07
EggNOG OGs2EPHI@1|root,2SSPP@2759|Eukaryota,3ADWM@33154|Opisthokonta,3P8QN@4751|Fungi,3QZ8H@4890|Ascomycota,203CS@147541|Dothideomycetes
DescriptionGAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain
Cds size195
COG categoryK
BRITEko00000,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186812.414272-CDS-P-wetherbeei_contig5437:224..4191683186812.414272-CDS-P-wetherbeei_contig5437:224..419Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5437 225..419 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5437.1.1prot_P-wetherbeei_contig5437.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5437 225..419 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5437.1.1

>prot_P-wetherbeei_contig5437.1.1 ID=prot_P-wetherbeei_contig5437.1.1|Name=mRNA_P-wetherbeei_contig5437.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=65bp
MYAQHFAADGESEQMRSTCDACTRSKIKCEGGLPCARCNRRKVECVYTEK
RRCGPKRKKPPPDEA
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mRNA from alignment at P-wetherbeei_contig5437:225..419-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5437.1.1 ID=mRNA_P-wetherbeei_contig5437.1.1|Name=mRNA_P-wetherbeei_contig5437.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=195bp|location=Sequence derived from alignment at P-wetherbeei_contig5437:225..419- (Phaeothamnion wetherbeei SAG_119_79)
ATGTACGCCCAGCACTTCGCGGCGGATGGCGAAAGCGAGCAGATGCGATC
AACGTGTGACGCGTGCACGCGGTCCAAAATCAAGTGCGAGGGCGGCCTCC
CCTGCGCGCGATGCAACCGCCGCAAGGTAGAATGCGTCTACACAGAGAAG
CGGCGCTGCGGACCAAAGCGCAAGAAGCCGCCCCCCGACGAGGCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5437:225..419-

>mRNA_P-wetherbeei_contig5437.1.1 ID=mRNA_P-wetherbeei_contig5437.1.1|Name=mRNA_P-wetherbeei_contig5437.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=195bp|location=Sequence derived from alignment at P-wetherbeei_contig5437:225..419- (Phaeothamnion wetherbeei SAG_119_79)
ATGTACGCCCAGCACTTCGCGGCGGATGGCGAAAGCGAGCAGATGCGATC
AACGTGTGACGCGTGCACGCGGTCCAAAATCAAGTGCGAGGGCGGCCTCC
CCTGCGCGCGATGCAACCGCCGCAAGGTAGAATGCGTCTACACAGAGAAG
CGGCGCTGCGGACCAAAGCGCAAGAAGCCGCCCCCCGACGAGGCC
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