mRNA_P-wetherbeei_contig54353.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-wetherbeei_contig54353.1.1
Unique Name	mRNA_P-wetherbeei_contig54353.1.1
Type	mRNA
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)

Homology

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BLAST of mRNA_P-wetherbeei_contig54353.1.1 vs. uniprot
Match: A0A1E4HL96_9PROT (AB hydrolase-1 domain-containing protein n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1E4HL96_9PROT)

HSP 1 Score: 319 bits (818), Expect = 1.520e-108
Identity = 158/176 (89.77%), Postives = 169/176 (96.02%), Query Frame = 1

Query:    1 GTARSTLSRLTYSVAQMADDALQLIEGLGFDRVHWCGHSTGGAMGQVLAIDHPGRIDRLVLSSTWAKTDAFFRRLFEVRSLMLRELGPEAYLKSSALALNMPSWVRDHDADLVAAEAKARETIPVPEIVLSRIAAIVAHDRREQLQKVLAPTLAICARDDTVTPLYFTEELVRLIP 528
            GT RS+LSR+TYSV QMADDALQLIEGLG+D+VHWCGHSTGGAMGQVLAI+HP R+DRLVLS+TWAKTDAFFRRLFEVRSL+LRELGP AYLKSSALALNMPSW+RDHDADLVAAE KA+ETIP+PEIVLSRIAAIVAHDRREQLQKV APTLAICARDD VTPLYFTEELVRLIP
Sbjct:   56 GTGRSSLSRITYSVGQMADDALQLIEGLGYDQVHWCGHSTGGAMGQVLAIEHPERVDRLVLSATWAKTDAFFRRLFEVRSLLLRELGPAAYLKSSALALNMPSWIRDHDADLVAAEVKAQETIPIPEIVLSRIAAIVAHDRREQLQKVQAPTLAICARDDMVTPLYFTEELVRLIP 231

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BLAST of mRNA_P-wetherbeei_contig54353.1.1 vs. uniprot
Match: A0A1T4N950_9HYPH (Aminoacrylate hydrolase n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4N950_9HYPH)

HSP 1 Score: 319 bits (818), Expect = 1.520e-108
Identity = 162/175 (92.57%), Postives = 168/175 (96.00%), Query Frame = 1

Query:    1 GTARSTLSRLTYSVAQMADDALQLIEGLGFDRVHWCGHSTGGAMGQVLAIDHPGRIDRLVLSSTWAKTDAFFRRLFEVRSLMLRELGPEAYLKSSALALNMPSWVRDHDADLVAAEAKARETIPVPEIVLSRIAAIVAHDRREQLQKVLAPTLAICARDDTVTPLYFTEELVRLI 525
            GTARSTLSR+ YSVAQMADDALQLIEGLGFD+VHWCGHSTGGAMGQVLAI+HP RIDRLVLSSTWAKTDAFFRRLFEVRSLMLRELGP AYLK+SALALNMP+WVRDHDADL AAEAKA ETIPVPEIVLSRIAAIVAHDRREQLQK+ A TLAICARDDTVTPLYFTEELVRLI
Sbjct:   56 GTARSTLSRIEYSVAQMADDALQLIEGLGFDKVHWCGHSTGGAMGQVLAIEHPERIDRLVLSSTWAKTDAFFRRLFEVRSLMLRELGPAAYLKASALALNMPAWVRDHDADLAAAEAKATETIPVPEIVLSRIAAIVAHDRREQLQKIRARTLAICARDDTVTPLYFTEELVRLI 230

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BLAST of mRNA_P-wetherbeei_contig54353.1.1 vs. uniprot
Match: A0A1F3A2J2_9PROT (AB hydrolase-1 domain-containing protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1F3A2J2_9PROT)

HSP 1 Score: 314 bits (804), Expect = 2.050e-106
Identity = 158/176 (89.77%), Postives = 165/176 (93.75%), Query Frame = 1

Query:    1 GTARSTLSRLTYSVAQMADDALQLIEGLGFDRVHWCGHSTGGAMGQVLAIDHPGRIDRLVLSSTWAKTDAFFRRLFEVRSLMLRELGPEAYLKSSALALNMPSWVRDHDADLVAAEAKARETIPVPEIVLSRIAAIVAHDRREQLQKVLAPTLAICARDDTVTPLYFTEELVRLIP 528
            GT RSTLS++ YSV QMADDALQLIEGLG++RV+WCGHSTGGAMGQ LAIDHP RIDRLVLSSTWA+TDAFFRRLFEVRSLMLRELGP AYLK+SALALNMPSWVRDHDADL  AEAKA ETIPVPEIVLSRIAAIVAHDRREQLQ V APTLAICARDDTVTPLYFTEELVRLIP
Sbjct:   56 GTGRSTLSQIAYSVEQMADDALQLIEGLGYERVYWCGHSTGGAMGQALAIDHPDRIDRLVLSSTWARTDAFFRRLFEVRSLMLRELGPAAYLKASALALNMPSWVRDHDADLAVAEAKANETIPVPEIVLSRIAAIVAHDRREQLQVVRAPTLAICARDDTVTPLYFTEELVRLIP 231

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BLAST of mRNA_P-wetherbeei_contig54353.1.1 vs. uniprot
Match: A0A512NM00_9HYPH (Hydrolase n=1 Tax=Reyranella soli TaxID=1230389 RepID=A0A512NM00_9HYPH)

HSP 1 Score: 311 bits (796), Expect = 3.390e-105
Identity = 156/176 (88.64%), Postives = 166/176 (94.32%), Query Frame = 1

Query:    1 GTARSTLSRLTYSVAQMADDALQLIEGLGFDRVHWCGHSTGGAMGQVLAIDHPGRIDRLVLSSTWAKTDAFFRRLFEVRSLMLRELGPEAYLKSSALALNMPSWVRDHDADLVAAEAKARETIPVPEIVLSRIAAIVAHDRREQLQKVLAPTLAICARDDTVTPLYFTEELVRLIP 528
            GTARSTLS++TYSV QMADDALQLI+ LG+D+VHWCGHSTGGAMGQVLAI+HP RIDRLVLS+TWAKTDAFFRRLFEVRSL+L+ELGP AYLKSSALALNMPSWVRDHDADL  AEAKA ETIP+PEIVLSRIAAIVAHDRREQLQKV A  LAICARDDTVTPLYFTEELVRLIP
Sbjct:   56 GTARSTLSQITYSVEQMADDALQLIDALGYDKVHWCGHSTGGAMGQVLAIEHPDRIDRLVLSATWAKTDAFFRRLFEVRSLVLKELGPLAYLKSSALALNMPSWVRDHDADLAIAEAKAAETIPIPEIVLSRIAAIVAHDRREQLQKVRAAALAICARDDTVTPLYFTEELVRLIP 231

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BLAST of mRNA_P-wetherbeei_contig54353.1.1 vs. uniprot
Match: A0A259MVG2_9PROT (AB hydrolase-1 domain-containing protein n=5 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259MVG2_9PROT)

HSP 1 Score: 308 bits (789), Expect = 3.940e-104
Identity = 155/176 (88.07%), Postives = 166/176 (94.32%), Query Frame = 1

Query:    1 GTARSTLSRLTYSVAQMADDALQLIEGLGFDRVHWCGHSTGGAMGQVLAIDHPGRIDRLVLSSTWAKTDAFFRRLFEVRSLMLRELGPEAYLKSSALALNMPSWVRDHDADLVAAEAKARETIPVPEIVLSRIAAIVAHDRREQLQKVLAPTLAICARDDTVTPLYFTEELVRLIP 528
            GTARS+LSR+ YSV QMADDALQLIEGLG+++VHWCGHSTGGAMGQVLAI+HP RIDRLVLS+TWAKTDAFFRRLFE+RSLMLRELGP AYLKSSALALN P+WVRDHDA LVAAEAKA ETIPVPEIVLSRIAAIVAHDRREQLQ+V A  LA+CARDDTVTPLYFTEELVRLIP
Sbjct:   56 GTARSSLSRIDYSVEQMADDALQLIEGLGYEKVHWCGHSTGGAMGQVLAIEHPARIDRLVLSATWAKTDAFFRRLFEMRSLMLRELGPAAYLKSSALALNSPAWVRDHDAALVAAEAKALETIPVPEIVLSRIAAIVAHDRREQLQRVKARALAVCARDDTVTPLYFTEELVRLIP 231

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BLAST of mRNA_P-wetherbeei_contig54353.1.1 vs. uniprot
Match: A0A521LIT7_9HYPH (Alpha/beta fold hydrolase n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521LIT7_9HYPH)

HSP 1 Score: 304 bits (779), Expect = 1.310e-102
Identity = 154/176 (87.50%), Postives = 165/176 (93.75%), Query Frame = 1

Query:    1 GTARSTLSRLTYSVAQMADDALQLIEGLGFDRVHWCGHSTGGAMGQVLAIDHPGRIDRLVLSSTWAKTDAFFRRLFEVRSLMLRELGPEAYLKSSALALNMPSWVRDHDADLVAAEAKARETIPVPEIVLSRIAAIVAHDRREQLQKVLAPTLAICARDDTVTPLYFTEELVRLIP 528
            GTARSTLS++TYSVAQMADDALQL++GLG+D+VHWCGHSTGGAMGQVLAI+   RIDRLVLS+TWAKTDAFFRRLFEVR+LML+ LGP AYLKSSALALN PSWVRDHDADLVAAEAKA ETIPVPEIVLSRIAAIVAHDRR  LQKV A TLA+CARDDTVTPLYFTEELVRLIP
Sbjct:   56 GTARSTLSKITYSVAQMADDALQLMDGLGYDKVHWCGHSTGGAMGQVLAIEQSRRIDRLVLSATWAKTDAFFRRLFEVRALMLKGLGPAAYLKSSALALNSPSWVRDHDADLVAAEAKALETIPVPEIVLSRIAAIVAHDRRADLQKVKARTLAVCARDDTVTPLYFTEELVRLIP 231

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BLAST of mRNA_P-wetherbeei_contig54353.1.1 vs. uniprot
Match: A0A1H8LIZ4_9PROT (Aminoacrylate hydrolase n=2 Tax=unclassified Rhodospirillales TaxID=941843 RepID=A0A1H8LIZ4_9PROT)

HSP 1 Score: 300 bits (769), Expect = 4.490e-101
Identity = 151/176 (85.80%), Postives = 160/176 (90.91%), Query Frame = 1

Query:    1 GTARSTLSRLTYSVAQMADDALQLIEGLGFDRVHWCGHSTGGAMGQVLAIDHPGRIDRLVLSSTWAKTDAFFRRLFEVRSLMLRELGPEAYLKSSALALNMPSWVRDHDADLVAAEAKARETIPVPEIVLSRIAAIVAHDRREQLQKVLAPTLAICARDDTVTPLYFTEELVRLIP 528
            GT RSTLSR+TYSVAQMADDALQL++ LG+ RVHWCGHSTGGAMGQVLAI+ P RIDRLVLS+TWAKTDAFFRRLFEVRS MLRELGP AY+K +ALAL MPSW RDHD DL A EAKA ETIPVPEIVLSRIAAIVAHDRR+QLQKV APTLAIC RDDTVTPLYFTEELVRLIP
Sbjct:   56 GTGRSTLSRITYSVAQMADDALQLMDALGYARVHWCGHSTGGAMGQVLAIEQPDRIDRLVLSATWAKTDAFFRRLFEVRSTMLRELGPVAYMKGNALALYMPSWTRDHDDDLAALEAKANETIPVPEIVLSRIAAIVAHDRRDQLQKVRAPTLAICTRDDTVTPLYFTEELVRLIP 231

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BLAST of mRNA_P-wetherbeei_contig54353.1.1 vs. uniprot
Match: A0A5C5TL49_9HYPH (Alpha/beta fold hydrolase n=2 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5TL49_9HYPH)

HSP 1 Score: 270 bits (690), Expect = 5.450e-89
Identity = 133/176 (75.57%), Postives = 153/176 (86.93%), Query Frame = 1

Query:    1 GTARSTLSRLTYSVAQMADDALQLIEGLGFDRVHWCGHSTGGAMGQVLAIDHPGRIDRLVLSSTWAKTDAFFRRLFEVRSLMLRELGPEAYLKSSALALNMPSWVRDHDADLVAAEAKARETIPVPEIVLSRIAAIVAHDRREQLQKVLAPTLAICARDDTVTPLYFTEELVRLIP 528
            GT RSTLSR+ YSV QMADDALQL++ LG +R H+ GHSTGGAMGQV+A DHPGR+DRLVL  TWA+TDAFFRRLFEVR+L+L+ LGP+AY K+SALALNMP+WVRDHDADLVA EA A +TIP PEIVLSRIAAIVAHDRRE+L+ +  PTLAI ARDD VTP YFTEE+ RL+P
Sbjct:   63 GTGRSTLSRIAYSVTQMADDALQLMDALGLERAHYIGHSTGGAMGQVIATDHPGRLDRLVLCGTWARTDAFFRRLFEVRALVLKHLGPQAYTKASALALNMPAWVRDHDADLVANEAIASQTIPEPEIVLSRIAAIVAHDRRERLRDITCPTLAIGARDDQVTPAYFTEEIGRLVP 238

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BLAST of mRNA_P-wetherbeei_contig54353.1.1 vs. uniprot
Match: A0A537N973_9PROT (Alpha/beta fold hydrolase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537N973_9PROT)

HSP 1 Score: 192 bits (489), Expect = 1.520e-59
Identity = 91/110 (82.73%), Postives = 101/110 (91.82%), Query Frame = 1

Query:    1 GTARSTLSRLTYSVAQMADDALQLIEGLGFDRVHWCGHSTGGAMGQVLAIDHPGRIDRLVLSSTWAKTDAFFRRLFEVRSLMLRELGPEAYLKSSALALNMPSWVRDHDA 330
            GT RSTLSR+ YSVAQMADDALQLI+ LGFD+VHWCGHSTGGAMGQVLAI+HPGRIDRLVLS+TWA+TDAFFRRLFE R+ +L+ELGP AY +SSALALN P WVRDHDA
Sbjct:   56 GTGRSTLSRIQYSVAQMADDALQLIDALGFDKVHWCGHSTGGAMGQVLAIEHPGRIDRLVLSATWARTDAFFRRLFEARAQVLKELGPAAYQRSSALALNSPFWVRDHDA 165

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BLAST of mRNA_P-wetherbeei_contig54353.1.1 vs. uniprot
Match: K2JTQ9_9PROT (Alpha/beta hydrolase fold protein n=3 Tax=Oceanibaculum TaxID=659693 RepID=K2JTQ9_9PROT)

HSP 1 Score: 187 bits (474), Expect = 2.430e-56
Identity = 99/177 (55.93%), Postives = 130/177 (73.45%), Query Frame = 1

Query:    1 GTARSTLSRLTYSVAQMADDALQLIEGLGFDRVHWCGHSTGGAMGQVLAIDHPGRIDRLVLSSTWAKTDAFFRRLFEVRSLMLRELGPEAYLKSSALALNMPSWVRDH-DADLVAAEAKARETIPVPEIVLSRIAAIVAHDRREQLQKVLAPTLAICARDDTVTPLYFTEELVRLIP 528
            GT RS+L R+ YSV QMADD L L++ LG D+ H+ GHSTGGAMGQ +A++HP RIDRLVLS+TWA  D +F++LF VR+ +L  +GP AYL+++ L +     +RD+ DA L+  EA A++ +PVPEIV SRIAAI+AHDRR+ +  +   TL   ARDD VTP Y +EEL RLIP
Sbjct:   56 GTGRSSLDRIEYSVPQMADDVLALMDHLGIDKAHFAGHSTGGAMGQHIALEHPERIDRLVLSATWAGFDGYFQQLFRVRTEILDSMGPGAYLRANILFMLPSDHLRDNPDAGLITDEAAAKQ-VPVPEIVKSRIAAIMAHDRRKDVPTIQHRTLVFGARDDMVTPAYLSEELGRLIP 231

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig54353.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig54353.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A1E4HL96_9PROT	1.520e-108	89.77	AB hydrolase-1 domain-containing protein n=4 Tax=A...	[more]
A0A1T4N950_9HYPH	1.520e-108	92.57	Aminoacrylate hydrolase n=1 Tax=Enhydrobacter aero...	[more]
A0A1F3A2J2_9PROT	2.050e-106	89.77	AB hydrolase-1 domain-containing protein n=2 Tax=A...	[more]
A0A512NM00_9HYPH	3.390e-105	88.64	Hydrolase n=1 Tax=Reyranella soli TaxID=1230389 Re...	[more]
A0A259MVG2_9PROT	3.940e-104	88.07	AB hydrolase-1 domain-containing protein n=5 Tax=A...	[more]
A0A521LIT7_9HYPH	1.310e-102	87.50	Alpha/beta fold hydrolase n=1 Tax=Reyranella sp. T...	[more]
A0A1H8LIZ4_9PROT	4.490e-101	85.80	Aminoacrylate hydrolase n=2 Tax=unclassified Rhodo...	[more]
A0A5C5TL49_9HYPH	5.450e-89	75.57	Alpha/beta fold hydrolase n=2 Tax=Reyranella sp. C...	[more]
A0A537N973_9PROT	1.520e-59	82.73	Alpha/beta fold hydrolase n=1 Tax=Alphaproteobacte...	[more]
K2JTQ9_9PROT	2.430e-56	55.93	Alpha/beta hydrolase fold protein n=3 Tax=Oceaniba...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig54353	contig	P-wetherbeei_contig54353:3..530 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	0
Start	0
Seed ortholog	1205680.CAKO01000037_gene1235
PFAMs	Abhydrolase_1
Model size	528
Max annot lvl	28211\|Alphaproteobacteria
Hectar predicted targeting category	other localisation
Exons	1
Evalue	1.75e-109
EggNOG OGs	COG2267@1\|root,COG2267@2\|Bacteria,1QXIE@1224\|Proteobacteria,2TXBK@28211\|Alphaproteobacteria
Description	Serine aminopeptidase, S33
Cds size	528
COG category	I

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1683186812.1608057-CDS-P-wetherbeei_contig54353:2..530	1683186812.1608057-CDS-P-wetherbeei_contig54353:2..530	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig54353 3..530 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig54353.1.1	prot_P-wetherbeei_contig54353.1.1	Phaeothamnion wetherbeei SAG_119_79	polypeptide	P-wetherbeei_contig54353 3..530 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-wetherbeei_contig54353:3..530-
coding sequence from alignment at P-wetherbeei_contig54353:3..530-

protein sequence of mRNA_P-wetherbeei_contig54353.1.1

>prot_P-wetherbeei_contig54353.1.1 ID=prot_P-wetherbeei_contig54353.1.1|Name=mRNA_P-wetherbeei_contig54353.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=176bp
GTARSTLSRLTYSVAQMADDALQLIEGLGFDRVHWCGHSTGGAMGQVLAI
DHPGRIDRLVLSSTWAKTDAFFRRLFEVRSLMLRELGPEAYLKSSALALN
MPSWVRDHDADLVAAEAKARETIPVPEIVLSRIAAIVAHDRREQLQKVLA
PTLAICARDDTVTPLYFTEELVRLIP

mRNA from alignment at P-wetherbeei_contig54353:3..530-

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-wetherbeei_contig54353.1.1 ID=mRNA_P-wetherbeei_contig54353.1.1|Name=mRNA_P-wetherbeei_contig54353.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig54353:3..530- (Phaeothamnion wetherbeei SAG_119_79)
GGCACCGCGCGCAGCACGCTGTCGCGACTCACCTACAGCGTCGCGCAGAT
GGCCGACGATGCGCTGCAACTCATCGAGGGGCTGGGCTTCGACCGGGTCC
ATTGGTGCGGCCATTCGACAGGTGGCGCCATGGGCCAGGTGCTGGCGATC
GACCATCCCGGCCGCATAGACCGGCTGGTGCTGAGCTCGACCTGGGCCAA
GACCGATGCCTTCTTCCGCCGTCTGTTCGAGGTCCGCTCCCTGATGCTGC
GCGAACTGGGCCCCGAGGCCTACCTGAAATCGAGCGCGCTGGCGCTCAAC
ATGCCCTCCTGGGTGCGCGACCATGACGCCGACCTGGTGGCGGCCGAAGC
CAAGGCCCGCGAGACCATTCCGGTCCCCGAGATCGTCCTGTCGCGCATCG
CCGCCATCGTCGCCCACGACCGGCGGGAACAGTTGCAGAAGGTGCTGGCG
CCGACCCTGGCGATCTGCGCCCGCGACGATACCGTGACCCCGCTCTATTT
CACGGAAGAGCTGGTCCGGCTGATCCCG

Coding sequence (CDS) from alignment at P-wetherbeei_contig54353:3..530-

>mRNA_P-wetherbeei_contig54353.1.1 ID=mRNA_P-wetherbeei_contig54353.1.1|Name=mRNA_P-wetherbeei_contig54353.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig54353:3..530- (Phaeothamnion wetherbeei SAG_119_79)
GGCACCGCGCGCAGCACGCTGTCGCGACTCACCTACAGCGTCGCGCAGAT
GGCCGACGATGCGCTGCAACTCATCGAGGGGCTGGGCTTCGACCGGGTCC
ATTGGTGCGGCCATTCGACAGGTGGCGCCATGGGCCAGGTGCTGGCGATC
GACCATCCCGGCCGCATAGACCGGCTGGTGCTGAGCTCGACCTGGGCCAA
GACCGATGCCTTCTTCCGCCGTCTGTTCGAGGTCCGCTCCCTGATGCTGC
GCGAACTGGGCCCCGAGGCCTACCTGAAATCGAGCGCGCTGGCGCTCAAC
ATGCCCTCCTGGGTGCGCGACCATGACGCCGACCTGGTGGCGGCCGAAGC
CAAGGCCCGCGAGACCATTCCGGTCCCCGAGATCGTCCTGTCGCGCATCG
CCGCCATCGTCGCCCACGACCGGCGGGAACAGTTGCAGAAGGTGCTGGCG
CCGACCCTGGCGATCTGCGCCCGCGACGATACCGTGACCCCGCTCTATTT
CACGGAAGAGCTGGTCCGGCTGATCCCG